Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.45□□□□□ -1.86
KCMF1Q9P0J7 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
KCMF1Q9P0J7 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
KCMF1Q9P0J7 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
KCMF1Q9P0J7 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
KCMF1Q9P0J7 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.44□□□□□ -1.86
KCMF1Q9P0J7 AC233263.6-201ENST00000631132 1963 ntBASIC3.44□□□□□ -1.86
KCMF1Q9P0J7 Y_RNA.27-201ENST00000362540 103 ntBASIC3.44□□□□□ -1.86
KCMF1Q9P0J7 Y_RNA.288-201ENST00000364854 92 ntBASIC3.44□□□□□ -1.86
KCMF1Q9P0J7 RNA5SP171-201ENST00000391071 115 ntBASIC3.44□□□□□ -1.86
KCMF1Q9P0J7 MIR1302-6-201ENST00000408466 90 ntBASIC3.44□□□□□ -1.86
KCMF1Q9P0J7 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.44□□□□□ -1.86
KCMF1Q9P0J7 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.44□□□□□ -1.86
KCMF1Q9P0J7 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
KCMF1Q9P0J7 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
KCMF1Q9P0J7 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.44□□□□□ -1.86
KCMF1Q9P0J7 AL136097.1-201ENST00000456945 913 ntBASIC3.44□□□□□ -1.86
KCMF1Q9P0J7 RPS26P21-201ENST00000475397 348 ntBASIC3.44□□□□□ -1.86
KCMF1Q9P0J7 AC104564.1-201ENST00000493028 407 ntBASIC3.44□□□□□ -1.86
KCMF1Q9P0J7 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.44□□□□□ -1.86
KCMF1Q9P0J7 SNORA31.23-201ENST00000517219 133 ntBASIC3.44□□□□□ -1.86
KCMF1Q9P0J7 IGKV2-23-201ENST00000518729 323 ntBASIC3.44□□□□□ -1.86
KCMF1Q9P0J7 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
KCMF1Q9P0J7 AL442163.3-201ENST00000554110 156 ntBASIC3.44□□□□□ -1.86
KCMF1Q9P0J7 MIR4444-1-201ENST00000581696 74 ntBASIC3.44□□□□□ -1.86
KCMF1Q9P0J7 MIR4444-2-201ENST00000584390 74 ntBASIC3.44□□□□□ -1.86
KCMF1Q9P0J7 KLKP1-201ENST00000595979 403 ntBASIC3.44□□□□□ -1.86
KCMF1Q9P0J7 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.44□□□□□ -1.86
KCMF1Q9P0J7 RPL23AP88-201ENST00000605759 454 ntBASIC3.44□□□□□ -1.86
KCMF1Q9P0J7 RMST_8.1-201ENST00000610287 165 ntBASIC3.44□□□□□ -1.86
KCMF1Q9P0J7 AC130454.1-201ENST00000622948 401 ntBASIC3.44□□□□□ -1.86
KCMF1Q9P0J7 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.44□□□□□ -1.86
KCMF1Q9P0J7 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
KCMF1Q9P0J7 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.44□□□□□ -1.86
KCMF1Q9P0J7 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
KCMF1Q9P0J7 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
KCMF1Q9P0J7 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.43□□□□□ -1.86
KCMF1Q9P0J7 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
KCMF1Q9P0J7 RNU6-222P-201ENST00000362438 107 ntBASIC3.43□□□□□ -1.86
KCMF1Q9P0J7 RNA5SP42-201ENST00000364278 115 ntBASIC3.43□□□□□ -1.86
KCMF1Q9P0J7 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.43□□□□□ -1.86
KCMF1Q9P0J7 RNU6-472P-201ENST00000384299 107 ntBASIC3.43□□□□□ -1.86
KCMF1Q9P0J7 Y_RNA.504-201ENST00000384481 104 ntBASIC3.43□□□□□ -1.86
KCMF1Q9P0J7 MIR32-201ENST00000384965 70 ntBASIC3.43□□□□□ -1.86
KCMF1Q9P0J7 MT-TW-201ENST00000387382 68 ntBASIC3.43□□□□□ -1.86
KCMF1Q9P0J7 RNU6-907P-201ENST00000390924 102 ntBASIC3.43□□□□□ -1.86
KCMF1Q9P0J7 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.43□□□□□ -1.86
KCMF1Q9P0J7 RNU6-130P-201ENST00000411112 103 ntBASIC3.43□□□□□ -1.86
KCMF1Q9P0J7 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.43□□□□□ -1.86
KCMF1Q9P0J7 AL356968.1-201ENST00000416622 474 ntBASIC3.43□□□□□ -1.86
KCMF1Q9P0J7 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.43□□□□□ -1.86
KCMF1Q9P0J7 RPL32P34-201ENST00000486380 400 ntBASIC3.43□□□□□ -1.86
KCMF1Q9P0J7 AF186996.7-201ENST00000492781 209 ntBASIC3.43□□□□□ -1.86
KCMF1Q9P0J7 AC010469.2-201ENST00000496412 480 ntBASIC3.43□□□□□ -1.86
KCMF1Q9P0J7 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC3.43□□□□□ -1.86
KCMF1Q9P0J7 RNU6-1143P-201ENST00000516125 104 ntBASIC3.43□□□□□ -1.86
KCMF1Q9P0J7 ACA59.2-201ENST00000517061 156 ntBASIC3.43□□□□□ -1.86
KCMF1Q9P0J7 AC007375.1-201ENST00000554513 578 ntBASIC3.43□□□□□ -1.86
KCMF1Q9P0J7 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.43□□□□□ -1.86
KCMF1Q9P0J7 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
KCMF1Q9P0J7 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
KCMF1Q9P0J7 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
KCMF1Q9P0J7 AL161912.2-201ENST00000565707 3007 ntBASIC3.42□□□□□ -1.86
KCMF1Q9P0J7 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
KCMF1Q9P0J7 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
KCMF1Q9P0J7 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
KCMF1Q9P0J7 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
KCMF1Q9P0J7 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.42□□□□□ -1.86
KCMF1Q9P0J7 OR56A5-201ENST00000340110 738 ntBASIC3.42□□□□□ -1.86
KCMF1Q9P0J7 Y_RNA.376-201ENST00000365638 108 ntBASIC3.42□□□□□ -1.86
KCMF1Q9P0J7 SNORA29-201ENST00000384183 140 ntBASIC3.42□□□□□ -1.86
KCMF1Q9P0J7 Y_RNA.483-201ENST00000384380 101 ntBASIC3.42□□□□□ -1.86
KCMF1Q9P0J7 ATP5A1P2-201ENST00000412323 255 ntBASIC3.42□□□□□ -1.86
KCMF1Q9P0J7 RPL23AP95-201ENST00000426806 265 ntBASIC3.42□□□□□ -1.86
KCMF1Q9P0J7 AC091286.1-201ENST00000431233 461 ntBASIC3.42□□□□□ -1.86
KCMF1Q9P0J7 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.42□□□□□ -1.86
KCMF1Q9P0J7 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.42□□□□□ -1.86
KCMF1Q9P0J7 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.42□□□□□ -1.86
KCMF1Q9P0J7 AC087477.1-201ENST00000465747 340 ntBASIC3.42□□□□□ -1.86
KCMF1Q9P0J7 AC104619.4-201ENST00000510773 249 ntBASIC3.42□□□□□ -1.86
KCMF1Q9P0J7 AC022868.1-201ENST00000517767 391 ntBASIC3.42□□□□□ -1.86
KCMF1Q9P0J7 AC026403.1-201ENST00000518938 295 ntBASIC3.42□□□□□ -1.86
KCMF1Q9P0J7 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
KCMF1Q9P0J7 AP000867.2-201ENST00000532468 320 ntBASIC3.42□□□□□ -1.86
KCMF1Q9P0J7 HSPE1P4-201ENST00000550617 308 ntBASIC3.42□□□□□ -1.86
KCMF1Q9P0J7 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.42□□□□□ -1.86
KCMF1Q9P0J7 AC090617.3-201ENST00000573670 475 ntBASIC3.42□□□□□ -1.86
KCMF1Q9P0J7 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.42□□□□□ -1.86
KCMF1Q9P0J7 SNORA51-201ENST00000606420 132 ntBASIC3.42□□□□□ -1.86
KCMF1Q9P0J7 SNORA43.4-201ENST00000629559 138 ntBASIC3.42□□□□□ -1.86
KCMF1Q9P0J7 MIR3529-201ENST00000637713 78 ntBASIC3.42□□□□□ -1.86
KCMF1Q9P0J7 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.42□□□□□ -1.86
KCMF1Q9P0J7 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
KCMF1Q9P0J7 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
KCMF1Q9P0J7 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
KCMF1Q9P0J7 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
KCMF1Q9P0J7 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
KCMF1Q9P0J7 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
KCMF1Q9P0J7 SNORD9-201ENST00000362566 104 ntBASIC3.41□□□□□ -1.86
KCMF1Q9P0J7 RNU6-283P-201ENST00000364788 107 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms