Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 RNU6-36P-201ENST00000384172 107 ntBASIC2.36□□□□□ -2.03
HACD3Q9P035 RNU6-4P-201ENST00000384205 107 ntBASIC2.36□□□□□ -2.03
HACD3Q9P035 RNU6-5P-201ENST00000384238 107 ntBASIC2.36□□□□□ -2.03
HACD3Q9P035 RNU6-3P-201ENST00000384314 107 ntBASIC2.36□□□□□ -2.03
HACD3Q9P035 RNU6-16P-201ENST00000384385 107 ntBASIC2.36□□□□□ -2.03
HACD3Q9P035 RNU6-15P-201ENST00000384534 107 ntBASIC2.36□□□□□ -2.03
HACD3Q9P035 RNU6-2-201ENST00000384627 107 ntBASIC2.36□□□□□ -2.03
HACD3Q9P035 RNU6-29P-201ENST00000384637 107 ntBASIC2.36□□□□□ -2.03
HACD3Q9P035 RNU6-9-201ENST00000384776 107 ntBASIC2.36□□□□□ -2.03
HACD3Q9P035 RNU6-33P-201ENST00000384793 107 ntBASIC2.36□□□□□ -2.03
HACD3Q9P035 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
HACD3Q9P035 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.36□□□□□ -2.03
HACD3Q9P035 TOMM20P4-201ENST00000427861 435 ntBASIC2.36□□□□□ -2.03
HACD3Q9P035 SRIP2-201ENST00000428470 166 ntBASIC2.36□□□□□ -2.03
HACD3Q9P035 ERLEC1P1-201ENST00000433806 578 ntBASIC2.36□□□□□ -2.03
HACD3Q9P035 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC2.36□□□□□ -2.03
HACD3Q9P035 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.36□□□□□ -2.03
HACD3Q9P035 RNU6-1208P-201ENST00000459588 107 ntBASIC2.36□□□□□ -2.03
HACD3Q9P035 AP001324.2-201ENST00000461163 319 ntBASIC2.36□□□□□ -2.03
HACD3Q9P035 AC117503.1-201ENST00000472241 394 ntBASIC2.36□□□□□ -2.03
HACD3Q9P035 RPS29P25-201ENST00000481709 171 ntBASIC2.36□□□□□ -2.03
HACD3Q9P035 Y_RNA.654-201ENST00000497848 106 ntBASIC2.36□□□□□ -2.03
HACD3Q9P035 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
HACD3Q9P035 RNU6-189P-201ENST00000516120 101 ntBASIC2.36□□□□□ -2.03
HACD3Q9P035 MTND4LP26-201ENST00000518144 282 ntBASIC2.36□□□□□ -2.03
HACD3Q9P035 BTF3P12-201ENST00000519620 469 ntBASIC2.36□□□□□ -2.03
HACD3Q9P035 AC023050.3-201ENST00000541142 333 ntBASIC2.36□□□□□ -2.03
HACD3Q9P035 MIR5007-201ENST00000583098 95 ntBASIC2.36□□□□□ -2.03
HACD3Q9P035 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.36□□□□□ -2.03
HACD3Q9P035 AC092747.3-201ENST00000603769 301 ntBASIC2.36□□□□□ -2.03
HACD3Q9P035 RNU6-6P-201ENST00000606623 107 ntBASIC2.36□□□□□ -2.03
HACD3Q9P035 Z82243.1-201ENST00000609432 473 ntBASIC2.36□□□□□ -2.03
HACD3Q9P035 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
HACD3Q9P035 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
HACD3Q9P035 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.36□□□□□ -2.03
HACD3Q9P035 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
HACD3Q9P035 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
HACD3Q9P035 RNU6-858P-201ENST00000362436 107 ntBASIC2.35□□□□□ -2.03
HACD3Q9P035 RNU6-78P-201ENST00000362897 107 ntBASIC2.35□□□□□ -2.03
HACD3Q9P035 Y_RNA.111-201ENST00000363248 100 ntBASIC2.35□□□□□ -2.03
HACD3Q9P035 RNU6-1083P-201ENST00000384022 107 ntBASIC2.35□□□□□ -2.03
HACD3Q9P035 MIR147B-201ENST00000390185 80 ntBASIC2.35□□□□□ -2.03
HACD3Q9P035 ARL5AP1-201ENST00000418991 388 ntBASIC2.35□□□□□ -2.03
HACD3Q9P035 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.35□□□□□ -2.03
HACD3Q9P035 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.35□□□□□ -2.03
HACD3Q9P035 HMGB1P31-201ENST00000437242 427 ntBASIC2.35□□□□□ -2.03
HACD3Q9P035 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.35□□□□□ -2.03
HACD3Q9P035 HMGN2P26-201ENST00000463169 339 ntBASIC2.35□□□□□ -2.03
HACD3Q9P035 MED28P2-201ENST00000475771 317 ntBASIC2.35□□□□□ -2.03
HACD3Q9P035 RPL7P43-201ENST00000478876 753 ntBASIC2.35□□□□□ -2.03
HACD3Q9P035 AC079140.5-201ENST00000507882 310 ntBASIC2.35□□□□□ -2.03
HACD3Q9P035 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.35□□□□□ -2.03
HACD3Q9P035 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.35□□□□□ -2.03
HACD3Q9P035 SNORA14.1-201ENST00000516113 141 ntBASIC2.35□□□□□ -2.03
HACD3Q9P035 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
HACD3Q9P035 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.35□□□□□ -2.03
HACD3Q9P035 CYCSP27-201ENST00000527643 293 ntBASIC2.35□□□□□ -2.03
HACD3Q9P035 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.35□□□□□ -2.03
HACD3Q9P035 AC008121.1-201ENST00000603244 268 ntBASIC2.35□□□□□ -2.03
HACD3Q9P035 uc_338.14-201ENST00000613162 166 ntBASIC2.35□□□□□ -2.03
HACD3Q9P035 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.35□□□□□ -2.03
HACD3Q9P035 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
HACD3Q9P035 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
HACD3Q9P035 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.34□□□□□ -2.03
HACD3Q9P035 AC005336.3-201ENST00000623833 2679 ntBASIC2.34□□□□□ -2.03
HACD3Q9P035 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
HACD3Q9P035 RNU1-52P-201ENST00000384190 164 ntBASIC2.34□□□□□ -2.03
HACD3Q9P035 RNU6-843P-201ENST00000384454 104 ntBASIC2.34□□□□□ -2.03
HACD3Q9P035 SNORA67.4-201ENST00000384688 142 ntBASIC2.34□□□□□ -2.03
HACD3Q9P035 Y_RNA.573-201ENST00000384763 105 ntBASIC2.34□□□□□ -2.03
HACD3Q9P035 MIR1277-201ENST00000408536 78 ntBASIC2.34□□□□□ -2.03
HACD3Q9P035 SNORD56-201ENST00000413522 71 ntBASIC2.34□□□□□ -2.03
HACD3Q9P035 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.34□□□□□ -2.03
HACD3Q9P035 AC009963.1-201ENST00000417265 157 ntBASIC2.34□□□□□ -2.03
HACD3Q9P035 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.34□□□□□ -2.03
HACD3Q9P035 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.34□□□□□ -2.03
HACD3Q9P035 IPO7P1-201ENST00000442031 636 ntBASIC2.34□□□□□ -2.03
HACD3Q9P035 FGF7P6-202ENST00000451282 293 ntBASIC2.34□□□□□ -2.03
HACD3Q9P035 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.34□□□□□ -2.03
HACD3Q9P035 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.34□□□□□ -2.03
HACD3Q9P035 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.34□□□□□ -2.03
HACD3Q9P035 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.34□□□□□ -2.03
HACD3Q9P035 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.34□□□□□ -2.03
HACD3Q9P035 MTCYBP40-201ENST00000509390 1135 ntBASIC2.34□□□□□ -2.03
HACD3Q9P035 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.34□□□□□ -2.03
HACD3Q9P035 RNU5B-3P-201ENST00000516601 115 ntBASIC2.34□□□□□ -2.03
HACD3Q9P035 RNU6-1069P-201ENST00000516612 133 ntBASIC2.34□□□□□ -2.03
HACD3Q9P035 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.34□□□□□ -2.03
HACD3Q9P035 BNIP3P25-201ENST00000596023 559 ntBASIC2.34□□□□□ -2.03
HACD3Q9P035 AP000907.4-201ENST00000604143 237 ntBASIC2.34□□□□□ -2.03
HACD3Q9P035 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.34□□□□□ -2.03
HACD3Q9P035 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.34□□□□□ -2.03
HACD3Q9P035 U4.7-201ENST00000638126 106 ntBASIC2.34□□□□□ -2.03
HACD3Q9P035 AL109809.4-201ENST00000603520 2185 ntBASIC2.34□□□□□ -2.04
HACD3Q9P035 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.34□□□□□ -2.04
HACD3Q9P035 MTND4P27-201ENST00000450813 1354 ntBASIC2.34□□□□□ -2.04
HACD3Q9P035 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
HACD3Q9P035 RNU5E-7P-201ENST00000365290 117 ntBASIC2.33□□□□□ -2.04
HACD3Q9P035 RNU6-877P-201ENST00000383868 107 ntBASIC2.33□□□□□ -2.04
HACD3Q9P035 SNORD116-20-201ENST00000384529 92 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms