Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.34□□□□□ -1.87
MKS1Q9NXB0 AC244670.1-201ENST00000436879 112 ntBASIC3.34□□□□□ -1.87
MKS1Q9NXB0 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.34□□□□□ -1.87
MKS1Q9NXB0 RPL36AP48-201ENST00000485521 314 ntBASIC3.34□□□□□ -1.87
MKS1Q9NXB0 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.34□□□□□ -1.87
MKS1Q9NXB0 AC016632.1-201ENST00000503994 196 ntBASIC3.34□□□□□ -1.87
MKS1Q9NXB0 RNU6-699P-201ENST00000517081 110 ntBASIC3.34□□□□□ -1.87
MKS1Q9NXB0 AC109329.1-201ENST00000518744 317 ntBASIC3.34□□□□□ -1.87
MKS1Q9NXB0 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.34□□□□□ -1.87
MKS1Q9NXB0 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.34□□□□□ -1.87
MKS1Q9NXB0 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
MKS1Q9NXB0 AC079598.5-201ENST00000547460 117 ntBASIC3.34□□□□□ -1.87
MKS1Q9NXB0 ANP32BP3-201ENST00000559213 706 ntBASIC3.34□□□□□ -1.87
MKS1Q9NXB0 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
MKS1Q9NXB0 AC233981.2-201ENST00000611524 1614 ntBASIC3.33□□□□□ -1.88
MKS1Q9NXB0 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.33□□□□□ -1.88
MKS1Q9NXB0 RNU6-529P-201ENST00000363383 104 ntBASIC3.33□□□□□ -1.88
MKS1Q9NXB0 SNORA63-201ENST00000363450 132 ntBASIC3.33□□□□□ -1.88
MKS1Q9NXB0 U8.9-201ENST00000365667 134 ntBASIC3.33□□□□□ -1.88
MKS1Q9NXB0 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
MKS1Q9NXB0 RNU6-1286P-201ENST00000383871 107 ntBASIC3.33□□□□□ -1.88
MKS1Q9NXB0 RNU6-142P-201ENST00000384019 107 ntBASIC3.33□□□□□ -1.88
MKS1Q9NXB0 RNU6-1083P-201ENST00000384022 107 ntBASIC3.33□□□□□ -1.88
MKS1Q9NXB0 SNORA26.7-201ENST00000391288 122 ntBASIC3.33□□□□□ -1.88
MKS1Q9NXB0 MIR1289-1-201ENST00000408836 144 ntBASIC3.33□□□□□ -1.88
MKS1Q9NXB0 RNA5SP229-201ENST00000410809 99 ntBASIC3.33□□□□□ -1.88
MKS1Q9NXB0 CYCSP48-201ENST00000417124 323 ntBASIC3.33□□□□□ -1.88
MKS1Q9NXB0 AC018865.2-201ENST00000423631 129 ntBASIC3.33□□□□□ -1.88
MKS1Q9NXB0 Z98742.2-201ENST00000431564 187 ntBASIC3.33□□□□□ -1.88
MKS1Q9NXB0 AC112771.1-201ENST00000463581 102 ntBASIC3.33□□□□□ -1.88
MKS1Q9NXB0 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.33□□□□□ -1.88
MKS1Q9NXB0 RNA5SP217-201ENST00000515959 91 ntBASIC3.33□□□□□ -1.88
MKS1Q9NXB0 SCARNA11.3-201ENST00000517276 130 ntBASIC3.33□□□□□ -1.88
MKS1Q9NXB0 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.33□□□□□ -1.88
MKS1Q9NXB0 AC016256.1-201ENST00000547971 354 ntBASIC3.33□□□□□ -1.88
MKS1Q9NXB0 AC007375.1-201ENST00000554513 578 ntBASIC3.33□□□□□ -1.88
MKS1Q9NXB0 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.33□□□□□ -1.88
MKS1Q9NXB0 MIR5701-3-201ENST00000578890 82 ntBASIC3.33□□□□□ -1.88
MKS1Q9NXB0 MIR5685-201ENST00000579080 79 ntBASIC3.33□□□□□ -1.88
MKS1Q9NXB0 MIR4506-201ENST00000584693 77 ntBASIC3.33□□□□□ -1.88
MKS1Q9NXB0 MIR5701-1-201ENST00000585138 82 ntBASIC3.33□□□□□ -1.88
MKS1Q9NXB0 VN1R85P-201ENST00000601587 426 ntBASIC3.33□□□□□ -1.88
MKS1Q9NXB0 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.33□□□□□ -1.88
MKS1Q9NXB0 MIR7851-201ENST00000610611 160 ntBASIC3.33□□□□□ -1.88
MKS1Q9NXB0 MIR5701-2-201ENST00000615634 82 ntBASIC3.33□□□□□ -1.88
MKS1Q9NXB0 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
MKS1Q9NXB0 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.33□□□□□ -1.88
MKS1Q9NXB0 AL359854.1-201ENST00000614203 1594 ntBASIC3.33□□□□□ -1.88
MKS1Q9NXB0 AC138915.1-201ENST00000565427 1685 ntBASIC3.33□□□□□ -1.88
MKS1Q9NXB0 AP000560.1-201ENST00000624150 1937 ntBASIC3.32□□□□□ -1.88
MKS1Q9NXB0 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
MKS1Q9NXB0 Y_RNA.31-201ENST00000362574 102 ntBASIC3.32□□□□□ -1.88
MKS1Q9NXB0 RNA5SP119-201ENST00000362715 117 ntBASIC3.32□□□□□ -1.88
MKS1Q9NXB0 RNA5SP197-201ENST00000363357 119 ntBASIC3.32□□□□□ -1.88
MKS1Q9NXB0 Y_RNA.132-201ENST00000363421 102 ntBASIC3.32□□□□□ -1.88
MKS1Q9NXB0 Y_RNA.252-201ENST00000364556 101 ntBASIC3.32□□□□□ -1.88
MKS1Q9NXB0 SNORA57.1-201ENST00000391227 145 ntBASIC3.32□□□□□ -1.88
MKS1Q9NXB0 GPM6BP3-201ENST00000442797 145 ntBASIC3.32□□□□□ -1.88
MKS1Q9NXB0 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.32□□□□□ -1.88
MKS1Q9NXB0 AC090096.1-201ENST00000489168 390 ntBASIC3.32□□□□□ -1.88
MKS1Q9NXB0 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.32□□□□□ -1.88
MKS1Q9NXB0 AC115990.1-201ENST00000526957 301 ntBASIC3.32□□□□□ -1.88
MKS1Q9NXB0 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.32□□□□□ -1.88
MKS1Q9NXB0 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
MKS1Q9NXB0 ELOCP31-201ENST00000540463 467 ntBASIC3.32□□□□□ -1.88
MKS1Q9NXB0 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.32□□□□□ -1.88
MKS1Q9NXB0 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC3.32□□□□□ -1.88
MKS1Q9NXB0 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.32□□□□□ -1.88
MKS1Q9NXB0 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.31□□□□□ -1.88
MKS1Q9NXB0 MTND4P27-201ENST00000450813 1354 ntBASIC3.31□□□□□ -1.88
MKS1Q9NXB0 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.31□□□□□ -1.88
MKS1Q9NXB0 AC092268.1-201ENST00000342691 405 ntBASIC3.31□□□□□ -1.88
MKS1Q9NXB0 RNU6-212P-201ENST00000362642 104 ntBASIC3.31□□□□□ -1.88
MKS1Q9NXB0 RNU6-99P-201ENST00000364721 107 ntBASIC3.31□□□□□ -1.88
MKS1Q9NXB0 RNA5SP479-201ENST00000364858 117 ntBASIC3.31□□□□□ -1.88
MKS1Q9NXB0 MIR1193-201ENST00000408109 78 ntBASIC3.31□□□□□ -1.88
MKS1Q9NXB0 RN7SKP123-201ENST00000410732 291 ntBASIC3.31□□□□□ -1.88
MKS1Q9NXB0 RNA5SP492-201ENST00000411330 114 ntBASIC3.31□□□□□ -1.88
MKS1Q9NXB0 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.31□□□□□ -1.88
MKS1Q9NXB0 PMCHL1-202ENST00000423102 261 ntBASIC3.31□□□□□ -1.88
MKS1Q9NXB0 CST9LP2-201ENST00000437612 320 ntBASIC3.31□□□□□ -1.88
MKS1Q9NXB0 RPL23AP58-201ENST00000440453 469 ntBASIC3.31□□□□□ -1.88
MKS1Q9NXB0 AL353705.4-201ENST00000449661 238 ntBASIC3.31□□□□□ -1.88
MKS1Q9NXB0 RN7SKP210-201ENST00000459176 261 ntBASIC3.31□□□□□ -1.88
MKS1Q9NXB0 snoU13.14-201ENST00000459372 104 ntBASIC3.31□□□□□ -1.88
MKS1Q9NXB0 RN7SL601P-201ENST00000471221 293 ntBASIC3.31□□□□□ -1.88
MKS1Q9NXB0 RN7SL132P-201ENST00000478131 296 ntBASIC3.31□□□□□ -1.88
MKS1Q9NXB0 RPL30P10-201ENST00000488148 337 ntBASIC3.31□□□□□ -1.88
MKS1Q9NXB0 RPL30P1-201ENST00000488676 339 ntBASIC3.31□□□□□ -1.88
MKS1Q9NXB0 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.31□□□□□ -1.88
MKS1Q9NXB0 RNU6-56P-201ENST00000516986 93 ntBASIC3.31□□□□□ -1.88
MKS1Q9NXB0 Y_RNA.711-201ENST00000516993 102 ntBASIC3.31□□□□□ -1.88
MKS1Q9NXB0 AP003072.1-201ENST00000531740 145 ntBASIC3.31□□□□□ -1.88
MKS1Q9NXB0 MIR5571-201ENST00000577998 113 ntBASIC3.31□□□□□ -1.88
MKS1Q9NXB0 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.31□□□□□ -1.88
MKS1Q9NXB0 U3.45-201ENST00000607547 219 ntBASIC3.31□□□□□ -1.88
MKS1Q9NXB0 AL359198.2-201ENST00000611836 194 ntBASIC3.31□□□□□ -1.88
MKS1Q9NXB0 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.31□□□□□ -1.88
MKS1Q9NXB0 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
MKS1Q9NXB0 AL161431.1-201ENST00000618966 4205 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 144.4 ms