Protein–RNA interactions for Protein: Q9NQ50

MRPL40, 39S ribosomal protein L40, mitochondrial, humanhuman

Known RBP Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40Q9NQ50 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.63□□□□□ -2.31
MRPL40Q9NQ50 RPL21P24-201ENST00000413752 448 ntBASIC0.63□□□□□ -2.31
MRPL40Q9NQ50 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.63□□□□□ -2.31
MRPL40Q9NQ50 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.63□□□□□ -2.31
MRPL40Q9NQ50 MRPL42P4-201ENST00000453267 443 ntBASIC0.63□□□□□ -2.31
MRPL40Q9NQ50 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
MRPL40Q9NQ50 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.63□□□□□ -2.31
MRPL40Q9NQ50 MIR3664-201ENST00000579074 99 ntBASIC0.63□□□□□ -2.31
MRPL40Q9NQ50 AC005332.6-201ENST00000613178 446 ntBASIC0.63□□□□□ -2.31
MRPL40Q9NQ50 uc_338.17-201ENST00000619633 179 ntBASIC0.63□□□□□ -2.31
MRPL40Q9NQ50 AL138955.1-201ENST00000622881 1040 ntBASIC0.63□□□□□ -2.31
MRPL40Q9NQ50 AC010487.4-201ENST00000637027 61 ntBASIC0.63□□□□□ -2.31
MRPL40Q9NQ50 RNU6-733P-201ENST00000410759 104 ntBASIC0.62□□□□□ -2.31
MRPL40Q9NQ50 AL158050.1-201ENST00000416077 457 ntBASIC0.62□□□□□ -2.31
MRPL40Q9NQ50 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.62□□□□□ -2.31
MRPL40Q9NQ50 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC0.62□□□□□ -2.31
MRPL40Q9NQ50 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC0.62□□□□□ -2.31
MRPL40Q9NQ50 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.62□□□□□ -2.31
MRPL40Q9NQ50 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.62□□□□□ -2.31
MRPL40Q9NQ50 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.62□□□□□ -2.31
MRPL40Q9NQ50 AC008751.2-201ENST00000597885 980 ntBASIC0.62□□□□□ -2.31
MRPL40Q9NQ50 AL157770.1-201ENST00000623049 439 ntBASIC0.62□□□□□ -2.31
MRPL40Q9NQ50 AC008133.2-201ENST00000624540 351 ntBASIC0.62□□□□□ -2.31
MRPL40Q9NQ50 AC004808.1-201ENST00000627671 721 ntBASIC0.62□□□□□ -2.31
MRPL40Q9NQ50 SNORD114-24-201ENST00000365029 72 ntBASIC0.61□□□□□ -2.31
MRPL40Q9NQ50 RNU6-16P-201ENST00000384385 107 ntBASIC0.61□□□□□ -2.31
MRPL40Q9NQ50 MIR194-1-201ENST00000384892 85 ntBASIC0.61□□□□□ -2.31
MRPL40Q9NQ50 MIR92A1-201ENST00000385233 78 ntBASIC0.61□□□□□ -2.31
MRPL40Q9NQ50 AL359634.1-202ENST00000404721 284 ntBASIC0.61□□□□□ -2.31
MRPL40Q9NQ50 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC0.61□□□□□ -2.31
MRPL40Q9NQ50 MTCYBP15-201ENST00000433123 1127 ntBASIC0.61□□□□□ -2.31
MRPL40Q9NQ50 GTF2IP13-201ENST00000438487 386 ntBASIC0.61□□□□□ -2.31
MRPL40Q9NQ50 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.61□□□□□ -2.31
MRPL40Q9NQ50 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
MRPL40Q9NQ50 RPS27AP8-201ENST00000452665 445 ntBASIC0.61□□□□□ -2.31
MRPL40Q9NQ50 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC0.61□□□□□ -2.31
MRPL40Q9NQ50 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC0.61□□□□□ -2.31
MRPL40Q9NQ50 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
MRPL40Q9NQ50 AC104806.1-201ENST00000508720 308 ntBASIC0.61□□□□□ -2.31
MRPL40Q9NQ50 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.61□□□□□ -2.31
MRPL40Q9NQ50 RNA5SP503-201ENST00000517047 117 ntBASIC0.61□□□□□ -2.31
MRPL40Q9NQ50 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.61□□□□□ -2.31
MRPL40Q9NQ50 AL356057.1-201ENST00000533798 831 ntBASIC0.61□□□□□ -2.31
MRPL40Q9NQ50 AC023538.1-201ENST00000534576 736 ntBASIC0.61□□□□□ -2.31
MRPL40Q9NQ50 AC006518.2-201ENST00000542513 940 ntBASIC0.61□□□□□ -2.31
MRPL40Q9NQ50 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC0.61□□□□□ -2.31
MRPL40Q9NQ50 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC0.61□□□□□ -2.31
MRPL40Q9NQ50 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.61□□□□□ -2.31
MRPL40Q9NQ50 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.61□□□□□ -2.31
MRPL40Q9NQ50 BNIP3P16-201ENST00000589779 534 ntBASIC0.61□□□□□ -2.31
MRPL40Q9NQ50 BNIP3P30-201ENST00000601184 574 ntBASIC0.61□□□□□ -2.31
MRPL40Q9NQ50 AC022022.2-201ENST00000602989 360 ntBASIC0.61□□□□□ -2.31
MRPL40Q9NQ50 AC006270.3-201ENST00000605967 1036 ntBASIC0.61□□□□□ -2.31
MRPL40Q9NQ50 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
MRPL40Q9NQ50 LINC02555-201ENST00000563933 1951 ntBASIC0.61□□□□□ -2.31
MRPL40Q9NQ50 AC107982.1-201ENST00000507171 1300 ntBASIC0.61□□□□□ -2.31
MRPL40Q9NQ50 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.6□□□□□ -2.31
MRPL40Q9NQ50 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
MRPL40Q9NQ50 RNU6-942P-201ENST00000363002 107 ntBASIC0.6□□□□□ -2.31
MRPL40Q9NQ50 SNORA4.1-201ENST00000364263 144 ntBASIC0.6□□□□□ -2.31
MRPL40Q9NQ50 AL591043.1-201ENST00000432461 424 ntBASIC0.6□□□□□ -2.31
MRPL40Q9NQ50 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.6□□□□□ -2.31
MRPL40Q9NQ50 RNU6-322P-201ENST00000516010 103 ntBASIC0.6□□□□□ -2.31
MRPL40Q9NQ50 OR6C7P-201ENST00000547875 934 ntBASIC0.6□□□□□ -2.31
MRPL40Q9NQ50 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.6□□□□□ -2.31
MRPL40Q9NQ50 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.6□□□□□ -2.31
MRPL40Q9NQ50 BNIP3P31-201ENST00000604515 566 ntBASIC0.6□□□□□ -2.31
MRPL40Q9NQ50 AC100814.1-201ENST00000606963 623 ntBASIC0.6□□□□□ -2.31
MRPL40Q9NQ50 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC0.6□□□□□ -2.31
MRPL40Q9NQ50 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.6□□□□□ -2.31
MRPL40Q9NQ50 RNA5SP499-201ENST00000363982 119 ntBASIC0.59□□□□□ -2.31
MRPL40Q9NQ50 RNU6-481P-201ENST00000384194 107 ntBASIC0.59□□□□□ -2.31
MRPL40Q9NQ50 RNU6-622P-201ENST00000384272 103 ntBASIC0.59□□□□□ -2.31
MRPL40Q9NQ50 MIR548B-201ENST00000385247 97 ntBASIC0.59□□□□□ -2.31
MRPL40Q9NQ50 AL357139.1-201ENST00000407792 426 ntBASIC0.59□□□□□ -2.31
MRPL40Q9NQ50 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.59□□□□□ -2.31
MRPL40Q9NQ50 RNU2-23P-201ENST00000410545 195 ntBASIC0.59□□□□□ -2.31
MRPL40Q9NQ50 DPRXP1-201ENST00000426312 460 ntBASIC0.59□□□□□ -2.31
MRPL40Q9NQ50 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.59□□□□□ -2.31
MRPL40Q9NQ50 AC114878.1-201ENST00000441166 358 ntBASIC0.59□□□□□ -2.31
MRPL40Q9NQ50 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.59□□□□□ -2.31
MRPL40Q9NQ50 RNU7-136P-201ENST00000458819 69 ntBASIC0.59□□□□□ -2.31
MRPL40Q9NQ50 AC092989.1-201ENST00000481235 277 ntBASIC0.59□□□□□ -2.31
MRPL40Q9NQ50 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.59□□□□□ -2.31
MRPL40Q9NQ50 PDCD5P2-201ENST00000507570 312 ntBASIC0.59□□□□□ -2.31
MRPL40Q9NQ50 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.59□□□□□ -2.31
MRPL40Q9NQ50 SNORD60.2-201ENST00000516883 86 ntBASIC0.59□□□□□ -2.31
MRPL40Q9NQ50 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.59□□□□□ -2.31
MRPL40Q9NQ50 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.59□□□□□ -2.31
MRPL40Q9NQ50 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.59□□□□□ -2.31
MRPL40Q9NQ50 HMGB1P33-201ENST00000563485 527 ntBASIC0.59□□□□□ -2.31
MRPL40Q9NQ50 MIR4711-201ENST00000578274 70 ntBASIC0.59□□□□□ -2.31
MRPL40Q9NQ50 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC0.59□□□□□ -2.31
MRPL40Q9NQ50 AC105129.3-201ENST00000605455 485 ntBASIC0.59□□□□□ -2.31
MRPL40Q9NQ50 AL450270.1-201ENST00000606160 391 ntBASIC0.59□□□□□ -2.31
MRPL40Q9NQ50 AC130324.3-201ENST00000614165 542 ntBASIC0.59□□□□□ -2.31
MRPL40Q9NQ50 AC092656.1-203ENST00000624134 423 ntBASIC0.59□□□□□ -2.31
MRPL40Q9NQ50 RNU6-952P-201ENST00000391164 108 ntBASIC0.58□□□□□ -2.32
MRPL40Q9NQ50 SNORA40C-201ENST00000391285 128 ntBASIC0.58□□□□□ -2.32
MRPL40Q9NQ50 AL117342.1-201ENST00000404861 406 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms