Protein–RNA interactions for Protein: Q9NPD3

EXOSC4, Exosome complex component RRP41, humanhuman

Known RBP Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4Q9NPD3 RNU6-667P-201ENST00000517186 102 ntBASIC1.49□□□□□ -2.17
EXOSC4Q9NPD3 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.49□□□□□ -2.17
EXOSC4Q9NPD3 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.49□□□□□ -2.17
EXOSC4Q9NPD3 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.49□□□□□ -2.17
EXOSC4Q9NPD3 AP003392.2-201ENST00000527269 208 ntBASIC1.49□□□□□ -2.17
EXOSC4Q9NPD3 DUXAP5-201ENST00000529668 529 ntBASIC1.49□□□□□ -2.17
EXOSC4Q9NPD3 IMMP1LP2-201ENST00000552954 492 ntBASIC1.49□□□□□ -2.17
EXOSC4Q9NPD3 MTND3P12-201ENST00000559068 328 ntBASIC1.49□□□□□ -2.17
EXOSC4Q9NPD3 AC026271.5-201ENST00000577873 130 ntBASIC1.49□□□□□ -2.17
EXOSC4Q9NPD3 AC078795.2-201ENST00000602835 1252 ntBASIC1.49□□□□□ -2.17
EXOSC4Q9NPD3 Z82243.1-201ENST00000609432 473 ntBASIC1.49□□□□□ -2.17
EXOSC4Q9NPD3 AC004908.3-201ENST00000610248 625 ntBASIC1.49□□□□□ -2.17
EXOSC4Q9NPD3 AC068944.2-201ENST00000610373 403 ntBASIC1.49□□□□□ -2.17
EXOSC4Q9NPD3 AL359314.1-201ENST00000616913 261 ntBASIC1.49□□□□□ -2.17
EXOSC4Q9NPD3 AC008121.3-201ENST00000618726 433 ntBASIC1.49□□□□□ -2.17
EXOSC4Q9NPD3 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.49□□□□□ -2.17
EXOSC4Q9NPD3 AC138649.3-201ENST00000622154 254 ntBASIC1.49□□□□□ -2.17
EXOSC4Q9NPD3 AP000770.2-201ENST00000623694 100 ntBASIC1.49□□□□□ -2.17
EXOSC4Q9NPD3 SCARNA4-202ENST00000625402 129 ntBASIC1.49□□□□□ -2.17
EXOSC4Q9NPD3 AP006437.1-201ENST00000641440 3685 ntBASIC1.49□□□□□ -2.17
EXOSC4Q9NPD3 MTND5P17-201ENST00000418405 1603 ntBASIC1.48□□□□□ -2.17
EXOSC4Q9NPD3 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
EXOSC4Q9NPD3 SNORD114-1-201ENST00000362705 72 ntBASIC1.48□□□□□ -2.17
EXOSC4Q9NPD3 RNU6-655P-201ENST00000362858 107 ntBASIC1.48□□□□□ -2.17
EXOSC4Q9NPD3 RNU6-78P-201ENST00000362897 107 ntBASIC1.48□□□□□ -2.17
EXOSC4Q9NPD3 SNORD115-3-201ENST00000363100 82 ntBASIC1.48□□□□□ -2.17
EXOSC4Q9NPD3 RNU6-944P-201ENST00000364023 107 ntBASIC1.48□□□□□ -2.17
EXOSC4Q9NPD3 RNU6-715P-201ENST00000365204 103 ntBASIC1.48□□□□□ -2.17
EXOSC4Q9NPD3 RNU6-1029P-201ENST00000384109 107 ntBASIC1.48□□□□□ -2.17
EXOSC4Q9NPD3 RNU6-45P-201ENST00000384471 107 ntBASIC1.48□□□□□ -2.17
EXOSC4Q9NPD3 POLHP1-201ENST00000411806 470 ntBASIC1.48□□□□□ -2.17
EXOSC4Q9NPD3 TOMM20P4-201ENST00000427861 435 ntBASIC1.48□□□□□ -2.17
EXOSC4Q9NPD3 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.48□□□□□ -2.17
EXOSC4Q9NPD3 AL365400.1-201ENST00000431854 640 ntBASIC1.48□□□□□ -2.17
EXOSC4Q9NPD3 MTND2P29-201ENST00000438595 412 ntBASIC1.48□□□□□ -2.17
EXOSC4Q9NPD3 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.48□□□□□ -2.17
EXOSC4Q9NPD3 RPL32P28-201ENST00000443577 397 ntBASIC1.48□□□□□ -2.17
EXOSC4Q9NPD3 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.48□□□□□ -2.17
EXOSC4Q9NPD3 RNA5SP269-201ENST00000459032 137 ntBASIC1.48□□□□□ -2.17
EXOSC4Q9NPD3 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.48□□□□□ -2.17
EXOSC4Q9NPD3 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.48□□□□□ -2.17
EXOSC4Q9NPD3 AC074344.1-201ENST00000512823 224 ntBASIC1.48□□□□□ -2.17
EXOSC4Q9NPD3 MTCO3P28-201ENST00000513351 515 ntBASIC1.48□□□□□ -2.17
EXOSC4Q9NPD3 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.48□□□□□ -2.17
EXOSC4Q9NPD3 RNU6-965P-201ENST00000516721 96 ntBASIC1.48□□□□□ -2.17
EXOSC4Q9NPD3 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.48□□□□□ -2.17
EXOSC4Q9NPD3 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.48□□□□□ -2.17
EXOSC4Q9NPD3 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.48□□□□□ -2.17
EXOSC4Q9NPD3 CBX3P4-201ENST00000538909 354 ntBASIC1.48□□□□□ -2.17
EXOSC4Q9NPD3 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.48□□□□□ -2.17
EXOSC4Q9NPD3 AL590229.1-201ENST00000603497 542 ntBASIC1.48□□□□□ -2.17
EXOSC4Q9NPD3 SNRPGP17-201ENST00000603780 214 ntBASIC1.48□□□□□ -2.17
EXOSC4Q9NPD3 Z94722.1-201ENST00000604328 474 ntBASIC1.48□□□□□ -2.17
EXOSC4Q9NPD3 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.48□□□□□ -2.17
EXOSC4Q9NPD3 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.48□□□□□ -2.17
EXOSC4Q9NPD3 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
EXOSC4Q9NPD3 RNU6-37P-201ENST00000362692 107 ntBASIC1.47□□□□□ -2.17
EXOSC4Q9NPD3 RNU6-181P-201ENST00000363225 107 ntBASIC1.47□□□□□ -2.17
EXOSC4Q9NPD3 RNU6-11P-201ENST00000364234 107 ntBASIC1.47□□□□□ -2.17
EXOSC4Q9NPD3 RNU6-25P-201ENST00000383873 107 ntBASIC1.47□□□□□ -2.17
EXOSC4Q9NPD3 RNU6-1-201ENST00000383898 107 ntBASIC1.47□□□□□ -2.17
EXOSC4Q9NPD3 RNU6-48P-201ENST00000384161 107 ntBASIC1.47□□□□□ -2.17
EXOSC4Q9NPD3 RNU6-36P-201ENST00000384172 107 ntBASIC1.47□□□□□ -2.17
EXOSC4Q9NPD3 RNU6-4P-201ENST00000384205 107 ntBASIC1.47□□□□□ -2.17
EXOSC4Q9NPD3 RNU6-5P-201ENST00000384238 107 ntBASIC1.47□□□□□ -2.17
EXOSC4Q9NPD3 RNU6-3P-201ENST00000384314 107 ntBASIC1.47□□□□□ -2.17
EXOSC4Q9NPD3 RNU6-16P-201ENST00000384385 107 ntBASIC1.47□□□□□ -2.17
EXOSC4Q9NPD3 RNU6-456P-201ENST00000384493 107 ntBASIC1.47□□□□□ -2.17
EXOSC4Q9NPD3 RNU6-15P-201ENST00000384534 107 ntBASIC1.47□□□□□ -2.17
EXOSC4Q9NPD3 RNU6-2-201ENST00000384627 107 ntBASIC1.47□□□□□ -2.17
EXOSC4Q9NPD3 RNU6-29P-201ENST00000384637 107 ntBASIC1.47□□□□□ -2.17
EXOSC4Q9NPD3 RNU6-997P-201ENST00000384725 107 ntBASIC1.47□□□□□ -2.17
EXOSC4Q9NPD3 RNU6-9-201ENST00000384776 107 ntBASIC1.47□□□□□ -2.17
EXOSC4Q9NPD3 RNU6-33P-201ENST00000384793 107 ntBASIC1.47□□□□□ -2.17
EXOSC4Q9NPD3 MIR9-3-201ENST00000385084 90 ntBASIC1.47□□□□□ -2.17
EXOSC4Q9NPD3 SNORA40.19-201ENST00000390846 128 ntBASIC1.47□□□□□ -2.17
EXOSC4Q9NPD3 MIR1262-201ENST00000408276 93 ntBASIC1.47□□□□□ -2.17
EXOSC4Q9NPD3 MIR1294-201ENST00000408503 142 ntBASIC1.47□□□□□ -2.17
EXOSC4Q9NPD3 RNU2-23P-201ENST00000410545 195 ntBASIC1.47□□□□□ -2.17
EXOSC4Q9NPD3 RNU6-607P-201ENST00000411283 108 ntBASIC1.47□□□□□ -2.17
EXOSC4Q9NPD3 RNU6-387P-201ENST00000411331 105 ntBASIC1.47□□□□□ -2.17
EXOSC4Q9NPD3 AC244505.5-201ENST00000443639 207 ntBASIC1.47□□□□□ -2.17
EXOSC4Q9NPD3 AC079781.2-201ENST00000446424 169 ntBASIC1.47□□□□□ -2.17
EXOSC4Q9NPD3 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.47□□□□□ -2.17
EXOSC4Q9NPD3 AC079448.1-201ENST00000449377 373 ntBASIC1.47□□□□□ -2.17
EXOSC4Q9NPD3 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.47□□□□□ -2.17
EXOSC4Q9NPD3 AL122001.1-201ENST00000457027 370 ntBASIC1.47□□□□□ -2.17
EXOSC4Q9NPD3 AC023790.1-201ENST00000482174 347 ntBASIC1.47□□□□□ -2.17
EXOSC4Q9NPD3 MTCYBP40-201ENST00000509390 1135 ntBASIC1.47□□□□□ -2.17
EXOSC4Q9NPD3 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.47□□□□□ -2.17
EXOSC4Q9NPD3 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.47□□□□□ -2.17
EXOSC4Q9NPD3 RNU6-445P-201ENST00000516949 107 ntBASIC1.47□□□□□ -2.17
EXOSC4Q9NPD3 AC109329.1-201ENST00000518744 317 ntBASIC1.47□□□□□ -2.17
EXOSC4Q9NPD3 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.47□□□□□ -2.17
EXOSC4Q9NPD3 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.47□□□□□ -2.17
EXOSC4Q9NPD3 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.47□□□□□ -2.17
EXOSC4Q9NPD3 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.47□□□□□ -2.17
EXOSC4Q9NPD3 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.47□□□□□ -2.17
EXOSC4Q9NPD3 BNIP3P25-201ENST00000596023 559 ntBASIC1.47□□□□□ -2.17
EXOSC4Q9NPD3 NIFKP6-201ENST00000598115 845 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 134.5 ms