Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 MIR7112-201ENST00000616126 65 ntBASIC2.43□□□□□ -2.02
CHMP1AQ9HD42 MIR7975-201ENST00000619350 68 ntBASIC2.43□□□□□ -2.02
CHMP1AQ9HD42 AC091953.5-201ENST00000622919 233 ntBASIC2.43□□□□□ -2.02
CHMP1AQ9HD42 AC009033.1-201ENST00000624279 431 ntBASIC2.43□□□□□ -2.02
CHMP1AQ9HD42 CASC19-280ENST00000642102 1351 ntBASIC2.43□□□□□ -2.02
CHMP1AQ9HD42 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
CHMP1AQ9HD42 ZNF271P-202ENST00000465539 1970 ntBASIC2.43□□□□□ -2.02
CHMP1AQ9HD42 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
CHMP1AQ9HD42 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.42□□□□□ -2.02
CHMP1AQ9HD42 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CHMP1AQ9HD42 SNORA38.1-201ENST00000364172 131 ntBASIC2.42□□□□□ -2.02
CHMP1AQ9HD42 Y_RNA.212-201ENST00000364177 102 ntBASIC2.42□□□□□ -2.02
CHMP1AQ9HD42 RNU6-1317P-201ENST00000364582 104 ntBASIC2.42□□□□□ -2.02
CHMP1AQ9HD42 U3.13-201ENST00000364804 214 ntBASIC2.42□□□□□ -2.02
CHMP1AQ9HD42 RNU6-1032P-201ENST00000384100 107 ntBASIC2.42□□□□□ -2.02
CHMP1AQ9HD42 RNU6-95P-201ENST00000384697 107 ntBASIC2.42□□□□□ -2.02
CHMP1AQ9HD42 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
CHMP1AQ9HD42 RNA5SP120-201ENST00000410900 112 ntBASIC2.42□□□□□ -2.02
CHMP1AQ9HD42 AL030996.1-201ENST00000411430 235 ntBASIC2.42□□□□□ -2.02
CHMP1AQ9HD42 MTND1P23-201ENST00000416931 372 ntBASIC2.42□□□□□ -2.02
CHMP1AQ9HD42 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.42□□□□□ -2.02
CHMP1AQ9HD42 AC124916.1-201ENST00000444020 547 ntBASIC2.42□□□□□ -2.02
CHMP1AQ9HD42 MTND1P11-201ENST00000456661 876 ntBASIC2.42□□□□□ -2.02
CHMP1AQ9HD42 RNU7-26P-201ENST00000458980 63 ntBASIC2.42□□□□□ -2.02
CHMP1AQ9HD42 SNORA84-201ENST00000459229 133 ntBASIC2.42□□□□□ -2.02
CHMP1AQ9HD42 SNRPGP7-201ENST00000469016 106 ntBASIC2.42□□□□□ -2.02
CHMP1AQ9HD42 RPL30P1-201ENST00000488676 339 ntBASIC2.42□□□□□ -2.02
CHMP1AQ9HD42 AC002456.2-201ENST00000509356 380 ntBASIC2.42□□□□□ -2.02
CHMP1AQ9HD42 RNU4-49P-201ENST00000516080 140 ntBASIC2.42□□□□□ -2.02
CHMP1AQ9HD42 SNORA9.3-201ENST00000516383 129 ntBASIC2.42□□□□□ -2.02
CHMP1AQ9HD42 RNU6-1088P-201ENST00000516850 104 ntBASIC2.42□□□□□ -2.02
CHMP1AQ9HD42 RNU6-612P-201ENST00000516909 102 ntBASIC2.42□□□□□ -2.02
CHMP1AQ9HD42 RN7SKP256-201ENST00000517201 314 ntBASIC2.42□□□□□ -2.02
CHMP1AQ9HD42 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.42□□□□□ -2.02
CHMP1AQ9HD42 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.42□□□□□ -2.02
CHMP1AQ9HD42 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.42□□□□□ -2.02
CHMP1AQ9HD42 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.42□□□□□ -2.02
CHMP1AQ9HD42 AC023043.2-201ENST00000589678 1026 ntBASIC2.42□□□□□ -2.02
CHMP1AQ9HD42 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.42□□□□□ -2.02
CHMP1AQ9HD42 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.42□□□□□ -2.02
CHMP1AQ9HD42 AC008739.3-201ENST00000603262 127 ntBASIC2.42□□□□□ -2.02
CHMP1AQ9HD42 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.42□□□□□ -2.02
CHMP1AQ9HD42 HMGB1P24-202ENST00000615653 685 ntBASIC2.42□□□□□ -2.02
CHMP1AQ9HD42 AC009248.2-201ENST00000619826 254 ntBASIC2.42□□□□□ -2.02
CHMP1AQ9HD42 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.42□□□□□ -2.02
CHMP1AQ9HD42 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
CHMP1AQ9HD42 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CHMP1AQ9HD42 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
CHMP1AQ9HD42 SNORA63.1-201ENST00000362493 131 ntBASIC2.41□□□□□ -2.02
CHMP1AQ9HD42 RNU6-1210P-201ENST00000363775 107 ntBASIC2.41□□□□□ -2.02
CHMP1AQ9HD42 RNA5SP267-201ENST00000364893 126 ntBASIC2.41□□□□□ -2.02
CHMP1AQ9HD42 Y_RNA.301-201ENST00000364990 103 ntBASIC2.41□□□□□ -2.02
CHMP1AQ9HD42 SNORD116-11-201ENST00000383882 92 ntBASIC2.41□□□□□ -2.02
CHMP1AQ9HD42 MIR144-201ENST00000384886 86 ntBASIC2.41□□□□□ -2.02
CHMP1AQ9HD42 RNU6-1106P-201ENST00000390845 107 ntBASIC2.41□□□□□ -2.02
CHMP1AQ9HD42 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
CHMP1AQ9HD42 CBX3P9-201ENST00000402326 552 ntBASIC2.41□□□□□ -2.02
CHMP1AQ9HD42 RNU6-325P-201ENST00000411132 105 ntBASIC2.41□□□□□ -2.02
CHMP1AQ9HD42 AP000275.1-201ENST00000411943 390 ntBASIC2.41□□□□□ -2.02
CHMP1AQ9HD42 AL139413.1-201ENST00000421309 217 ntBASIC2.41□□□□□ -2.02
CHMP1AQ9HD42 RPL23AP95-201ENST00000426806 265 ntBASIC2.41□□□□□ -2.02
CHMP1AQ9HD42 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.41□□□□□ -2.02
CHMP1AQ9HD42 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.41□□□□□ -2.02
CHMP1AQ9HD42 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.41□□□□□ -2.02
CHMP1AQ9HD42 AL353752.1-201ENST00000454946 260 ntBASIC2.41□□□□□ -2.02
CHMP1AQ9HD42 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.41□□□□□ -2.02
CHMP1AQ9HD42 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.41□□□□□ -2.02
CHMP1AQ9HD42 RNU7-187P-201ENST00000458985 68 ntBASIC2.41□□□□□ -2.02
CHMP1AQ9HD42 RPS29P27-201ENST00000463711 170 ntBASIC2.41□□□□□ -2.02
CHMP1AQ9HD42 RPL9P9-202ENST00000466501 579 ntBASIC2.41□□□□□ -2.02
CHMP1AQ9HD42 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.41□□□□□ -2.02
CHMP1AQ9HD42 AC010486.1-201ENST00000511793 424 ntBASIC2.41□□□□□ -2.02
CHMP1AQ9HD42 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.41□□□□□ -2.02
CHMP1AQ9HD42 AC025465.4-201ENST00000513422 638 ntBASIC2.41□□□□□ -2.02
CHMP1AQ9HD42 AC008885.1-201ENST00000514930 301 ntBASIC2.41□□□□□ -2.02
CHMP1AQ9HD42 RNU5F-2P-201ENST00000516066 82 ntBASIC2.41□□□□□ -2.02
CHMP1AQ9HD42 SNORA67.7-201ENST00000516664 135 ntBASIC2.41□□□□□ -2.02
CHMP1AQ9HD42 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.41□□□□□ -2.02
CHMP1AQ9HD42 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.41□□□□□ -2.02
CHMP1AQ9HD42 CBX3P7-201ENST00000532876 502 ntBASIC2.41□□□□□ -2.02
CHMP1AQ9HD42 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.41□□□□□ -2.02
CHMP1AQ9HD42 AL138963.2-201ENST00000605137 226 ntBASIC2.41□□□□□ -2.02
CHMP1AQ9HD42 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.41□□□□□ -2.02
CHMP1AQ9HD42 AC084757.4-201ENST00000616350 526 ntBASIC2.41□□□□□ -2.02
CHMP1AQ9HD42 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.41□□□□□ -2.02
CHMP1AQ9HD42 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
CHMP1AQ9HD42 Z82209.1-201ENST00000422141 2135 ntBASIC2.41□□□□□ -2.02
CHMP1AQ9HD42 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.4□□□□□ -2.02
CHMP1AQ9HD42 RNU6-562P-201ENST00000362731 107 ntBASIC2.4□□□□□ -2.03
CHMP1AQ9HD42 RNU6-1141P-201ENST00000364520 107 ntBASIC2.4□□□□□ -2.03
CHMP1AQ9HD42 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CHMP1AQ9HD42 FGF7P8-201ENST00000402994 292 ntBASIC2.4□□□□□ -2.03
CHMP1AQ9HD42 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.4□□□□□ -2.03
CHMP1AQ9HD42 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.4□□□□□ -2.03
CHMP1AQ9HD42 AC236972.1-201ENST00000433225 199 ntBASIC2.4□□□□□ -2.03
CHMP1AQ9HD42 AL645568.3-201ENST00000433683 316 ntBASIC2.4□□□□□ -2.03
CHMP1AQ9HD42 IFNA20P-201ENST00000436840 528 ntBASIC2.4□□□□□ -2.03
CHMP1AQ9HD42 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.4□□□□□ -2.03
CHMP1AQ9HD42 RNU6-329P-201ENST00000459618 107 ntBASIC2.4□□□□□ -2.03
CHMP1AQ9HD42 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms