Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 RPL26P26-201ENST00000480251 434 ntBASIC0.09□□□□□ -2.39
CHD8Q9HCK8 BET1P1-201ENST00000482276 359 ntBASIC0.09□□□□□ -2.39
CHD8Q9HCK8 RN7SKP88-201ENST00000516847 250 ntBASIC0.09□□□□□ -2.39
CHD8Q9HCK8 AL512310.8-201ENST00000550183 120 ntBASIC0.09□□□□□ -2.39
CHD8Q9HCK8 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.09□□□□□ -2.39
CHD8Q9HCK8 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC0.09□□□□□ -2.39
CHD8Q9HCK8 AC093249.1-201ENST00000567049 203 ntBASIC0.09□□□□□ -2.39
CHD8Q9HCK8 AC087685.1-201ENST00000587507 141 ntBASIC0.09□□□□□ -2.39
CHD8Q9HCK8 AC068790.6-201ENST00000602558 258 ntBASIC0.09□□□□□ -2.39
CHD8Q9HCK8 SNRPGP20-201ENST00000604477 205 ntBASIC0.09□□□□□ -2.39
CHD8Q9HCK8 7SK.8-201ENST00000612110 250 ntBASIC0.09□□□□□ -2.39
CHD8Q9HCK8 7SK.11-201ENST00000615477 250 ntBASIC0.09□□□□□ -2.39
CHD8Q9HCK8 7SK.13-201ENST00000622040 250 ntBASIC0.09□□□□□ -2.39
CHD8Q9HCK8 SNORD1A-201ENST00000364968 72 ntBASIC0.09□□□□□ -2.4
CHD8Q9HCK8 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.09□□□□□ -2.4
CHD8Q9HCK8 FABP5P14-201ENST00000437273 393 ntBASIC0.09□□□□□ -2.4
CHD8Q9HCK8 ACA64.5-201ENST00000516207 127 ntBASIC0.09□□□□□ -2.4
CHD8Q9HCK8 C1DP5-201ENST00000525775 383 ntBASIC0.09□□□□□ -2.4
CHD8Q9HCK8 AC090079.2-201ENST00000575289 768 ntBASIC0.09□□□□□ -2.4
CHD8Q9HCK8 AL161729.4-201ENST00000604650 476 ntBASIC0.09□□□□□ -2.4
CHD8Q9HCK8 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC0.09□□□□□ -2.4
CHD8Q9HCK8 AC138627.2-201ENST00000624202 601 ntBASIC0.09□□□□□ -2.4
CHD8Q9HCK8 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.08□□□□□ -2.4
CHD8Q9HCK8 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.08□□□□□ -2.4
CHD8Q9HCK8 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
CHD8Q9HCK8 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.08□□□□□ -2.4
CHD8Q9HCK8 MTCYBP32-201ENST00000427945 1084 ntBASIC0.08□□□□□ -2.4
CHD8Q9HCK8 RPL36AP53-201ENST00000432891 316 ntBASIC0.08□□□□□ -2.4
CHD8Q9HCK8 AC245047.7-201ENST00000440265 293 ntBASIC0.08□□□□□ -2.4
CHD8Q9HCK8 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.08□□□□□ -2.4
CHD8Q9HCK8 RNA5SP269-201ENST00000459032 137 ntBASIC0.08□□□□□ -2.4
CHD8Q9HCK8 SNORD126-201ENST00000459475 77 ntBASIC0.08□□□□□ -2.4
CHD8Q9HCK8 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC0.08□□□□□ -2.4
CHD8Q9HCK8 RNU6-581P-201ENST00000516214 105 ntBASIC0.08□□□□□ -2.4
CHD8Q9HCK8 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC0.08□□□□□ -2.4
CHD8Q9HCK8 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.08□□□□□ -2.4
CHD8Q9HCK8 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.08□□□□□ -2.4
CHD8Q9HCK8 MIR3678-201ENST00000578455 94 ntBASIC0.08□□□□□ -2.4
CHD8Q9HCK8 AL132822.1-201ENST00000617063 513 ntBASIC0.08□□□□□ -2.4
CHD8Q9HCK8 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
CHD8Q9HCK8 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC0.08□□□□□ -2.4
CHD8Q9HCK8 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC0.08□□□□□ -2.4
CHD8Q9HCK8 RNU6-386P-201ENST00000362650 107 ntBASIC0.08□□□□□ -2.4
CHD8Q9HCK8 RNU5A-1-201ENST00000362698 116 ntBASIC0.08□□□□□ -2.4
CHD8Q9HCK8 MIR649-201ENST00000384843 97 ntBASIC0.08□□□□□ -2.4
CHD8Q9HCK8 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC0.08□□□□□ -2.4
CHD8Q9HCK8 SPINT5P-201ENST00000448174 155 ntBASIC0.08□□□□□ -2.4
CHD8Q9HCK8 RPL18AP17-201ENST00000455326 198 ntBASIC0.08□□□□□ -2.4
CHD8Q9HCK8 AC084024.2-201ENST00000503480 791 ntBASIC0.08□□□□□ -2.4
CHD8Q9HCK8 AC010460.2-201ENST00000509054 677 ntBASIC0.08□□□□□ -2.4
CHD8Q9HCK8 AP001328.1-201ENST00000528550 176 ntBASIC0.08□□□□□ -2.4
CHD8Q9HCK8 AC136618.2-201ENST00000575091 400 ntBASIC0.08□□□□□ -2.4
CHD8Q9HCK8 MIR5093-201ENST00000583199 100 ntBASIC0.08□□□□□ -2.4
CHD8Q9HCK8 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.08□□□□□ -2.4
CHD8Q9HCK8 MIR635-201ENST00000384830 98 ntBASIC0.07□□□□□ -2.4
CHD8Q9HCK8 SNORD99-201ENST00000408612 74 ntBASIC0.07□□□□□ -2.4
CHD8Q9HCK8 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.07□□□□□ -2.4
CHD8Q9HCK8 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC0.07□□□□□ -2.4
CHD8Q9HCK8 AC109327.2-201ENST00000448339 378 ntBASIC0.07□□□□□ -2.4
CHD8Q9HCK8 AL049874.1-201ENST00000489560 388 ntBASIC0.07□□□□□ -2.4
CHD8Q9HCK8 AC002350.1-201ENST00000490759 375 ntBASIC0.07□□□□□ -2.4
CHD8Q9HCK8 RNU6-158P-201ENST00000517104 100 ntBASIC0.07□□□□□ -2.4
CHD8Q9HCK8 AC004217.3-201ENST00000551552 878 ntBASIC0.07□□□□□ -2.4
CHD8Q9HCK8 AL671309.1-201ENST00000603750 544 ntBASIC0.07□□□□□ -2.4
CHD8Q9HCK8 LARP7P1-201ENST00000605576 316 ntBASIC0.07□□□□□ -2.4
CHD8Q9HCK8 AL583856.2-201ENST00000606298 543 ntBASIC0.07□□□□□ -2.4
CHD8Q9HCK8 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC0.07□□□□□ -2.4
CHD8Q9HCK8 AL138713.1-201ENST00000624026 2130 ntBASIC0.07□□□□□ -2.4
CHD8Q9HCK8 AC017037.3-201ENST00000625016 472 ntBASIC0.07□□□□□ -2.4
CHD8Q9HCK8 MTND4P16-201ENST00000466108 1367 ntBASIC0.07□□□□□ -2.4
CHD8Q9HCK8 Y_RNA.421-201ENST00000384052 101 ntBASIC0.07□□□□□ -2.4
CHD8Q9HCK8 RNU6-1237P-201ENST00000384777 107 ntBASIC0.07□□□□□ -2.4
CHD8Q9HCK8 MIR888-201ENST00000401186 77 ntBASIC0.07□□□□□ -2.4
CHD8Q9HCK8 RNU2-33P-201ENST00000410344 192 ntBASIC0.07□□□□□ -2.4
CHD8Q9HCK8 RNA5SP100-201ENST00000410903 110 ntBASIC0.07□□□□□ -2.4
CHD8Q9HCK8 RNA5SP59-201ENST00000410922 110 ntBASIC0.07□□□□□ -2.4
CHD8Q9HCK8 AC139712.2-201ENST00000424302 339 ntBASIC0.07□□□□□ -2.4
CHD8Q9HCK8 BTF3P11-201ENST00000426582 477 ntBASIC0.07□□□□□ -2.4
CHD8Q9HCK8 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.07□□□□□ -2.4
CHD8Q9HCK8 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.07□□□□□ -2.4
CHD8Q9HCK8 AC099677.2-201ENST00000436385 175 ntBASIC0.07□□□□□ -2.4
CHD8Q9HCK8 SNRPEP9-201ENST00000436794 238 ntBASIC0.07□□□□□ -2.4
CHD8Q9HCK8 HSPE1P9-201ENST00000440046 311 ntBASIC0.07□□□□□ -2.4
CHD8Q9HCK8 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC0.07□□□□□ -2.4
CHD8Q9HCK8 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.07□□□□□ -2.4
CHD8Q9HCK8 RAP1BP2-201ENST00000478270 544 ntBASIC0.07□□□□□ -2.4
CHD8Q9HCK8 PDCD5P2-201ENST00000507570 312 ntBASIC0.07□□□□□ -2.4
CHD8Q9HCK8 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.07□□□□□ -2.4
CHD8Q9HCK8 RNA5SP503-201ENST00000517047 117 ntBASIC0.07□□□□□ -2.4
CHD8Q9HCK8 SCARNA16.5-201ENST00000517114 183 ntBASIC0.07□□□□□ -2.4
CHD8Q9HCK8 AC079598.5-201ENST00000547460 117 ntBASIC0.07□□□□□ -2.4
CHD8Q9HCK8 AC018659.1-201ENST00000551083 169 ntBASIC0.07□□□□□ -2.4
CHD8Q9HCK8 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.07□□□□□ -2.4
CHD8Q9HCK8 AP000860.1-201ENST00000605250 559 ntBASIC0.07□□□□□ -2.4
CHD8Q9HCK8 AL121992.2-201ENST00000606262 256 ntBASIC0.07□□□□□ -2.4
CHD8Q9HCK8 AC092106.3-201ENST00000611308 722 ntBASIC0.07□□□□□ -2.4
CHD8Q9HCK8 AC104465.1-201ENST00000611365 139 ntBASIC0.07□□□□□ -2.4
CHD8Q9HCK8 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.07□□□□□ -2.4
CHD8Q9HCK8 AL591926.4-201ENST00000616895 298 ntBASIC0.07□□□□□ -2.4
CHD8Q9HCK8 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.07□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms