Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.12□□□□□ -1.91
USP29Q9HBJ7 MIR3171-201ENST00000584270 74 ntBASIC3.12□□□□□ -1.91
USP29Q9HBJ7 AC005046.1-201ENST00000608515 625 ntBASIC3.12□□□□□ -1.91
USP29Q9HBJ7 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.12□□□□□ -1.91
USP29Q9HBJ7 MIR6852-201ENST00000621699 66 ntBASIC3.12□□□□□ -1.91
USP29Q9HBJ7 uc_338.22-201ENST00000622722 187 ntBASIC3.12□□□□□ -1.91
USP29Q9HBJ7 AC006386.2-201ENST00000624491 75 ntBASIC3.12□□□□□ -1.91
USP29Q9HBJ7 AC012005.1-201ENST00000624575 75 ntBASIC3.12□□□□□ -1.91
USP29Q9HBJ7 SCARNA4-202ENST00000625402 129 ntBASIC3.12□□□□□ -1.91
USP29Q9HBJ7 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
USP29Q9HBJ7 CDC27P3-201ENST00000635418 1910 ntBASIC3.11□□□□□ -1.91
USP29Q9HBJ7 AC103988.1-201ENST00000566382 2177 ntBASIC3.11□□□□□ -1.91
USP29Q9HBJ7 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
USP29Q9HBJ7 SNORA63-201ENST00000363450 132 ntBASIC3.11□□□□□ -1.91
USP29Q9HBJ7 SNORA80A-201ENST00000363922 136 ntBASIC3.11□□□□□ -1.91
USP29Q9HBJ7 RNU6-1317P-201ENST00000364582 104 ntBASIC3.11□□□□□ -1.91
USP29Q9HBJ7 RNU6-596P-201ENST00000365395 98 ntBASIC3.11□□□□□ -1.91
USP29Q9HBJ7 RNU6-890P-201ENST00000384121 107 ntBASIC3.11□□□□□ -1.91
USP29Q9HBJ7 SNORA54-201ENST00000384281 123 ntBASIC3.11□□□□□ -1.91
USP29Q9HBJ7 SNORA75.6-201ENST00000391318 127 ntBASIC3.11□□□□□ -1.91
USP29Q9HBJ7 RPS29P13-201ENST00000402041 169 ntBASIC3.11□□□□□ -1.91
USP29Q9HBJ7 MIR1289-1-201ENST00000408836 144 ntBASIC3.11□□□□□ -1.91
USP29Q9HBJ7 RNA5SP274-201ENST00000410484 108 ntBASIC3.11□□□□□ -1.91
USP29Q9HBJ7 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.11□□□□□ -1.91
USP29Q9HBJ7 BMS1P22-201ENST00000414726 313 ntBASIC3.11□□□□□ -1.91
USP29Q9HBJ7 AL137792.2-201ENST00000443484 235 ntBASIC3.11□□□□□ -1.91
USP29Q9HBJ7 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.11□□□□□ -1.91
USP29Q9HBJ7 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.11□□□□□ -1.91
USP29Q9HBJ7 Y_RNA.631-201ENST00000459607 101 ntBASIC3.11□□□□□ -1.91
USP29Q9HBJ7 RNA5SP76-201ENST00000516277 87 ntBASIC3.11□□□□□ -1.91
USP29Q9HBJ7 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.11□□□□□ -1.91
USP29Q9HBJ7 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.11□□□□□ -1.91
USP29Q9HBJ7 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.11□□□□□ -1.91
USP29Q9HBJ7 AC009314.1-201ENST00000603871 304 ntBASIC3.11□□□□□ -1.91
USP29Q9HBJ7 MIR7106-201ENST00000612419 65 ntBASIC3.11□□□□□ -1.91
USP29Q9HBJ7 PISRT1.1-201ENST00000616930 107 ntBASIC3.11□□□□□ -1.91
USP29Q9HBJ7 AC090617.7-201ENST00000623952 126 ntBASIC3.11□□□□□ -1.91
USP29Q9HBJ7 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
USP29Q9HBJ7 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
USP29Q9HBJ7 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
USP29Q9HBJ7 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
USP29Q9HBJ7 RPL9P7-201ENST00000330965 580 ntBASIC3.1□□□□□ -1.91
USP29Q9HBJ7 RNU6-1115P-201ENST00000362490 106 ntBASIC3.1□□□□□ -1.91
USP29Q9HBJ7 Y_RNA.31-201ENST00000362574 102 ntBASIC3.1□□□□□ -1.91
USP29Q9HBJ7 RNU5E-7P-201ENST00000365290 117 ntBASIC3.1□□□□□ -1.91
USP29Q9HBJ7 RNU6-1040P-201ENST00000383974 107 ntBASIC3.1□□□□□ -1.91
USP29Q9HBJ7 SNORA44-201ENST00000384584 132 ntBASIC3.1□□□□□ -1.91
USP29Q9HBJ7 RNU6-331P-201ENST00000384724 107 ntBASIC3.1□□□□□ -1.91
USP29Q9HBJ7 MIR559-201ENST00000385188 96 ntBASIC3.1□□□□□ -1.91
USP29Q9HBJ7 RNU6-174P-201ENST00000410406 106 ntBASIC3.1□□□□□ -1.91
USP29Q9HBJ7 RN7SKP58-201ENST00000411010 305 ntBASIC3.1□□□□□ -1.91
USP29Q9HBJ7 AL513043.1-201ENST00000439124 535 ntBASIC3.1□□□□□ -1.91
USP29Q9HBJ7 DAP3P1-201ENST00000441522 278 ntBASIC3.1□□□□□ -1.91
USP29Q9HBJ7 HMGN2P10-201ENST00000448085 265 ntBASIC3.1□□□□□ -1.91
USP29Q9HBJ7 BTF3P15-201ENST00000455606 336 ntBASIC3.1□□□□□ -1.91
USP29Q9HBJ7 RPL26P9-201ENST00000457466 433 ntBASIC3.1□□□□□ -1.91
USP29Q9HBJ7 RPL9P9-202ENST00000466501 579 ntBASIC3.1□□□□□ -1.91
USP29Q9HBJ7 RN7SL633P-201ENST00000488974 297 ntBASIC3.1□□□□□ -1.91
USP29Q9HBJ7 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.1□□□□□ -1.91
USP29Q9HBJ7 SNORA43.2-201ENST00000516652 128 ntBASIC3.1□□□□□ -1.91
USP29Q9HBJ7 Y_RNA.711-201ENST00000516993 102 ntBASIC3.1□□□□□ -1.91
USP29Q9HBJ7 AC007536.1-201ENST00000533382 349 ntBASIC3.1□□□□□ -1.91
USP29Q9HBJ7 AC024153.1-201ENST00000603103 365 ntBASIC3.1□□□□□ -1.91
USP29Q9HBJ7 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.1□□□□□ -1.91
USP29Q9HBJ7 AC073308.1-201ENST00000623696 305 ntBASIC3.1□□□□□ -1.91
USP29Q9HBJ7 AC092608.2-201ENST00000624427 218 ntBASIC3.1□□□□□ -1.91
USP29Q9HBJ7 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.1□□□□□ -1.91
USP29Q9HBJ7 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
USP29Q9HBJ7 FAM35CP-201ENST00000554755 2470 ntBASIC3.1□□□□□ -1.91
USP29Q9HBJ7 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
USP29Q9HBJ7 AC000403.1-201ENST00000613696 3585 ntBASIC3.1□□□□□ -1.91
USP29Q9HBJ7 Y_RNA.5-201ENST00000362334 102 ntBASIC3.09□□□□□ -1.91
USP29Q9HBJ7 Y_RNA.112-201ENST00000363250 102 ntBASIC3.09□□□□□ -1.91
USP29Q9HBJ7 Y_RNA.216-201ENST00000364205 93 ntBASIC3.09□□□□□ -1.91
USP29Q9HBJ7 RNU6-336P-201ENST00000364891 107 ntBASIC3.09□□□□□ -1.91
USP29Q9HBJ7 RNU1-100P-201ENST00000365255 165 ntBASIC3.09□□□□□ -1.91
USP29Q9HBJ7 U8.8-201ENST00000365399 135 ntBASIC3.09□□□□□ -1.91
USP29Q9HBJ7 RNU6-198P-201ENST00000384258 104 ntBASIC3.09□□□□□ -1.91
USP29Q9HBJ7 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.09□□□□□ -1.91
USP29Q9HBJ7 AL590004.1-201ENST00000405321 300 ntBASIC3.09□□□□□ -1.91
USP29Q9HBJ7 AL031121.1-201ENST00000406553 254 ntBASIC3.09□□□□□ -1.91
USP29Q9HBJ7 RN7SKP220-201ENST00000410611 288 ntBASIC3.09□□□□□ -1.91
USP29Q9HBJ7 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.09□□□□□ -1.91
USP29Q9HBJ7 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.09□□□□□ -1.91
USP29Q9HBJ7 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
USP29Q9HBJ7 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.09□□□□□ -1.91
USP29Q9HBJ7 AC243428.1-201ENST00000421099 264 ntBASIC3.09□□□□□ -1.91
USP29Q9HBJ7 PMCHL1-202ENST00000423102 261 ntBASIC3.09□□□□□ -1.91
USP29Q9HBJ7 USMG5P1-201ENST00000425964 177 ntBASIC3.09□□□□□ -1.91
USP29Q9HBJ7 RPL21P40-201ENST00000428586 483 ntBASIC3.09□□□□□ -1.91
USP29Q9HBJ7 RPS15AP10-201ENST00000432472 382 ntBASIC3.09□□□□□ -1.91
USP29Q9HBJ7 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.09□□□□□ -1.91
USP29Q9HBJ7 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.09□□□□□ -1.91
USP29Q9HBJ7 UBE2DNL-203ENST00000474922 222 ntBASIC3.09□□□□□ -1.91
USP29Q9HBJ7 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.09□□□□□ -1.91
USP29Q9HBJ7 RNU6-377P-201ENST00000515965 102 ntBASIC3.09□□□□□ -1.91
USP29Q9HBJ7 AC022634.1-201ENST00000520765 532 ntBASIC3.09□□□□□ -1.91
USP29Q9HBJ7 AP004607.1-201ENST00000524456 203 ntBASIC3.09□□□□□ -1.91
USP29Q9HBJ7 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.09□□□□□ -1.91
USP29Q9HBJ7 NACAP3-201ENST00000552100 481 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms