Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 RN7SKP57-201ENST00000517248 293 ntBASIC2.7□□□□□ -1.98
BRF2Q9HAW0 AC115990.1-201ENST00000526957 301 ntBASIC2.7□□□□□ -1.98
BRF2Q9HAW0 AP000889.2-201ENST00000532684 490 ntBASIC2.7□□□□□ -1.98
BRF2Q9HAW0 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.7□□□□□ -1.98
BRF2Q9HAW0 AC005668.1-201ENST00000571142 476 ntBASIC2.7□□□□□ -1.98
BRF2Q9HAW0 MIR5571-201ENST00000577998 113 ntBASIC2.7□□□□□ -1.98
BRF2Q9HAW0 AC100830.2-201ENST00000581636 240 ntBASIC2.7□□□□□ -1.98
BRF2Q9HAW0 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.7□□□□□ -1.98
BRF2Q9HAW0 AC096577.2-201ENST00000611455 153 ntBASIC2.7□□□□□ -1.98
BRF2Q9HAW0 AC107871.2-201ENST00000612894 502 ntBASIC2.7□□□□□ -1.98
BRF2Q9HAW0 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.7□□□□□ -1.98
BRF2Q9HAW0 MIR5739-201ENST00000619803 80 ntBASIC2.7□□□□□ -1.98
BRF2Q9HAW0 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
BRF2Q9HAW0 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.69□□□□□ -1.98
BRF2Q9HAW0 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.69□□□□□ -1.98
BRF2Q9HAW0 RNU6-655P-201ENST00000362858 107 ntBASIC2.69□□□□□ -1.98
BRF2Q9HAW0 MIR186-201ENST00000384988 86 ntBASIC2.69□□□□□ -1.98
BRF2Q9HAW0 FGF7P8-201ENST00000402994 292 ntBASIC2.69□□□□□ -1.98
BRF2Q9HAW0 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
BRF2Q9HAW0 RPL21P111-201ENST00000418453 477 ntBASIC2.69□□□□□ -1.98
BRF2Q9HAW0 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.69□□□□□ -1.98
BRF2Q9HAW0 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.69□□□□□ -1.98
BRF2Q9HAW0 AC003982.1-202ENST00000469928 248 ntBASIC2.69□□□□□ -1.98
BRF2Q9HAW0 CKS1BP2-201ENST00000497342 240 ntBASIC2.69□□□□□ -1.98
BRF2Q9HAW0 AC116353.2-201ENST00000505332 712 ntBASIC2.69□□□□□ -1.98
BRF2Q9HAW0 RNA5SP341-201ENST00000516261 117 ntBASIC2.69□□□□□ -1.98
BRF2Q9HAW0 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.69□□□□□ -1.98
BRF2Q9HAW0 MIR4325-201ENST00000583049 90 ntBASIC2.69□□□□□ -1.98
BRF2Q9HAW0 MIR5195-201ENST00000583555 115 ntBASIC2.69□□□□□ -1.98
BRF2Q9HAW0 MIR3942-201ENST00000585264 109 ntBASIC2.69□□□□□ -1.98
BRF2Q9HAW0 AC091135.1-201ENST00000585943 307 ntBASIC2.69□□□□□ -1.98
BRF2Q9HAW0 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.69□□□□□ -1.98
BRF2Q9HAW0 AL356157.2-201ENST00000605122 111 ntBASIC2.69□□□□□ -1.98
BRF2Q9HAW0 AL160281.1-201ENST00000605307 311 ntBASIC2.69□□□□□ -1.98
BRF2Q9HAW0 AC069234.5-201ENST00000611056 416 ntBASIC2.69□□□□□ -1.98
BRF2Q9HAW0 AC241585.2-209ENST00000638217 143 ntBASIC2.69□□□□□ -1.98
BRF2Q9HAW0 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
BRF2Q9HAW0 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
BRF2Q9HAW0 AC073346.2-201ENST00000624724 2058 ntBASIC2.69□□□□□ -1.98
BRF2Q9HAW0 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
BRF2Q9HAW0 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
BRF2Q9HAW0 U3.13-201ENST00000364804 214 ntBASIC2.68□□□□□ -1.98
BRF2Q9HAW0 RNU6-1283P-201ENST00000365314 105 ntBASIC2.68□□□□□ -1.98
BRF2Q9HAW0 RNU6-767P-201ENST00000384132 107 ntBASIC2.68□□□□□ -1.98
BRF2Q9HAW0 RNU6-1148P-201ENST00000410992 104 ntBASIC2.68□□□□□ -1.98
BRF2Q9HAW0 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.68□□□□□ -1.98
BRF2Q9HAW0 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.68□□□□□ -1.98
BRF2Q9HAW0 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.68□□□□□ -1.98
BRF2Q9HAW0 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.68□□□□□ -1.98
BRF2Q9HAW0 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.68□□□□□ -1.98
BRF2Q9HAW0 MTND3P10-201ENST00000450967 341 ntBASIC2.68□□□□□ -1.98
BRF2Q9HAW0 AMD1P1-201ENST00000457220 922 ntBASIC2.68□□□□□ -1.98
BRF2Q9HAW0 RPL9P9-202ENST00000466501 579 ntBASIC2.68□□□□□ -1.98
BRF2Q9HAW0 AC140059.1-201ENST00000489238 361 ntBASIC2.68□□□□□ -1.98
BRF2Q9HAW0 AC008526.1-201ENST00000509149 338 ntBASIC2.68□□□□□ -1.98
BRF2Q9HAW0 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.68□□□□□ -1.98
BRF2Q9HAW0 RNU6-864P-201ENST00000516256 108 ntBASIC2.68□□□□□ -1.98
BRF2Q9HAW0 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.68□□□□□ -1.98
BRF2Q9HAW0 AC138761.3-201ENST00000579993 334 ntBASIC2.68□□□□□ -1.98
BRF2Q9HAW0 MIR3672-201ENST00000584290 82 ntBASIC2.68□□□□□ -1.98
BRF2Q9HAW0 ZNF861P-201ENST00000588126 639 ntBASIC2.68□□□□□ -1.98
BRF2Q9HAW0 AL670379.2-201ENST00000604983 252 ntBASIC2.68□□□□□ -1.98
BRF2Q9HAW0 AC008121.3-201ENST00000618726 433 ntBASIC2.68□□□□□ -1.98
BRF2Q9HAW0 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.68□□□□□ -1.98
BRF2Q9HAW0 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
BRF2Q9HAW0 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
BRF2Q9HAW0 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
BRF2Q9HAW0 MTND4P23-201ENST00000447723 1363 ntBASIC2.67□□□□□ -1.98
BRF2Q9HAW0 RNU6-1210P-201ENST00000363775 107 ntBASIC2.67□□□□□ -1.98
BRF2Q9HAW0 SNORD46.1-201ENST00000364139 104 ntBASIC2.67□□□□□ -1.98
BRF2Q9HAW0 RNU6-790P-201ENST00000384479 105 ntBASIC2.67□□□□□ -1.98
BRF2Q9HAW0 RNU6-692P-201ENST00000384496 107 ntBASIC2.67□□□□□ -1.98
BRF2Q9HAW0 EEF1A1P41-201ENST00000414667 207 ntBASIC2.67□□□□□ -1.98
BRF2Q9HAW0 AL139396.1-201ENST00000421137 167 ntBASIC2.67□□□□□ -1.98
BRF2Q9HAW0 AC003685.2-201ENST00000422795 395 ntBASIC2.67□□□□□ -1.98
BRF2Q9HAW0 AL139132.1-201ENST00000431587 344 ntBASIC2.67□□□□□ -1.98
BRF2Q9HAW0 SNAP23P1-201ENST00000433229 246 ntBASIC2.67□□□□□ -1.98
BRF2Q9HAW0 AC243964.1-201ENST00000441814 261 ntBASIC2.67□□□□□ -1.98
BRF2Q9HAW0 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.67□□□□□ -1.98
BRF2Q9HAW0 RPL32P28-201ENST00000443577 397 ntBASIC2.67□□□□□ -1.98
BRF2Q9HAW0 AC073901.1-201ENST00000462471 408 ntBASIC2.67□□□□□ -1.98
BRF2Q9HAW0 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.67□□□□□ -1.98
BRF2Q9HAW0 MTCO1P29-201ENST00000496868 288 ntBASIC2.67□□□□□ -1.98
BRF2Q9HAW0 MTCO2P30-201ENST00000503662 364 ntBASIC2.67□□□□□ -1.98
BRF2Q9HAW0 AC114801.2-201ENST00000503825 781 ntBASIC2.67□□□□□ -1.98
BRF2Q9HAW0 RPL39P5-202ENST00000512505 151 ntBASIC2.67□□□□□ -1.98
BRF2Q9HAW0 RNU2-53P-201ENST00000516257 147 ntBASIC2.67□□□□□ -1.98
BRF2Q9HAW0 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.67□□□□□ -1.98
BRF2Q9HAW0 AC026464.5-201ENST00000562497 722 ntBASIC2.67□□□□□ -1.98
BRF2Q9HAW0 AL022345.1-201ENST00000607292 135 ntBASIC2.67□□□□□ -1.98
BRF2Q9HAW0 AL162274.2-201ENST00000614406 332 ntBASIC2.67□□□□□ -1.98
BRF2Q9HAW0 AL138726.1-201ENST00000614873 333 ntBASIC2.67□□□□□ -1.98
BRF2Q9HAW0 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
BRF2Q9HAW0 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
BRF2Q9HAW0 MAPK10-266ENST00000641066 6555 ntBASIC2.67□□□□□ -1.98
BRF2Q9HAW0 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
BRF2Q9HAW0 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
BRF2Q9HAW0 SNORA38-201ENST00000363946 132 ntBASIC2.66□□□□□ -1.98
BRF2Q9HAW0 Y_RNA.212-201ENST00000364177 102 ntBASIC2.66□□□□□ -1.98
BRF2Q9HAW0 SNORD116-11-201ENST00000383882 92 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms