Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 UBL5P3-201ENST00000475112 231 ntBASIC1.91□□□□□ -2.1
POLR1EQ9GZS1 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.91□□□□□ -2.1
POLR1EQ9GZS1 RN7SKP256-201ENST00000517201 314 ntBASIC1.91□□□□□ -2.1
POLR1EQ9GZS1 AC022616.8-201ENST00000533569 253 ntBASIC1.91□□□□□ -2.1
POLR1EQ9GZS1 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.91□□□□□ -2.1
POLR1EQ9GZS1 AC007834.2-201ENST00000536310 343 ntBASIC1.91□□□□□ -2.1
POLR1EQ9GZS1 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.91□□□□□ -2.1
POLR1EQ9GZS1 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.91□□□□□ -2.1
POLR1EQ9GZS1 MIR4775-201ENST00000581168 75 ntBASIC1.91□□□□□ -2.1
POLR1EQ9GZS1 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.91□□□□□ -2.1
POLR1EQ9GZS1 AC012493.3-201ENST00000604494 112 ntBASIC1.91□□□□□ -2.1
POLR1EQ9GZS1 AL354685.2-201ENST00000448218 1447 ntBASIC1.91□□□□□ -2.1
POLR1EQ9GZS1 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
POLR1EQ9GZS1 Y_RNA.40-201ENST00000362645 93 ntBASIC1.9□□□□□ -2.11
POLR1EQ9GZS1 RNU6-108P-201ENST00000365558 107 ntBASIC1.9□□□□□ -2.11
POLR1EQ9GZS1 RNU6-550P-201ENST00000391057 101 ntBASIC1.9□□□□□ -2.11
POLR1EQ9GZS1 RNA5SP465-201ENST00000391195 109 ntBASIC1.9□□□□□ -2.11
POLR1EQ9GZS1 RNU2-3P-201ENST00000410144 191 ntBASIC1.9□□□□□ -2.11
POLR1EQ9GZS1 RN7SKP142-201ENST00000411236 328 ntBASIC1.9□□□□□ -2.11
POLR1EQ9GZS1 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.9□□□□□ -2.11
POLR1EQ9GZS1 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.9□□□□□ -2.11
POLR1EQ9GZS1 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.9□□□□□ -2.11
POLR1EQ9GZS1 PRELID3BP1-201ENST00000457142 540 ntBASIC1.9□□□□□ -2.11
POLR1EQ9GZS1 snoU13.14-201ENST00000459372 104 ntBASIC1.9□□□□□ -2.11
POLR1EQ9GZS1 AC098862.1-201ENST00000504991 413 ntBASIC1.9□□□□□ -2.11
POLR1EQ9GZS1 RNA5SP182-201ENST00000516064 82 ntBASIC1.9□□□□□ -2.11
POLR1EQ9GZS1 SNORD27.1-201ENST00000516319 72 ntBASIC1.9□□□□□ -2.11
POLR1EQ9GZS1 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.9□□□□□ -2.11
POLR1EQ9GZS1 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.9□□□□□ -2.11
POLR1EQ9GZS1 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.9□□□□□ -2.11
POLR1EQ9GZS1 OSBPL9P5-201ENST00000542581 171 ntBASIC1.9□□□□□ -2.11
POLR1EQ9GZS1 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.9□□□□□ -2.11
POLR1EQ9GZS1 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.9□□□□□ -2.11
POLR1EQ9GZS1 AC245014.2-201ENST00000603689 287 ntBASIC1.9□□□□□ -2.11
POLR1EQ9GZS1 AC121247.2-201ENST00000604776 136 ntBASIC1.9□□□□□ -2.11
POLR1EQ9GZS1 AC246785.4-201ENST00000605374 287 ntBASIC1.9□□□□□ -2.11
POLR1EQ9GZS1 AC073114.1-201ENST00000612027 490 ntBASIC1.9□□□□□ -2.11
POLR1EQ9GZS1 RMST_7.1-201ENST00000621935 268 ntBASIC1.9□□□□□ -2.11
POLR1EQ9GZS1 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.9□□□□□ -2.11
POLR1EQ9GZS1 AC009487.4-201ENST00000624969 3585 ntBASIC1.89□□□□□ -2.11
POLR1EQ9GZS1 snoU2_19.1-201ENST00000362361 80 ntBASIC1.89□□□□□ -2.11
POLR1EQ9GZS1 SNORD14D-201ENST00000384390 87 ntBASIC1.89□□□□□ -2.11
POLR1EQ9GZS1 MIR454-201ENST00000390180 115 ntBASIC1.89□□□□□ -2.11
POLR1EQ9GZS1 BTF3L4P2-201ENST00000392798 346 ntBASIC1.89□□□□□ -2.11
POLR1EQ9GZS1 OR9R1P-201ENST00000412200 877 ntBASIC1.89□□□□□ -2.11
POLR1EQ9GZS1 CYCSP33-201ENST00000414485 327 ntBASIC1.89□□□□□ -2.11
POLR1EQ9GZS1 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.89□□□□□ -2.11
POLR1EQ9GZS1 AL590556.1-201ENST00000423231 483 ntBASIC1.89□□□□□ -2.11
POLR1EQ9GZS1 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.89□□□□□ -2.11
POLR1EQ9GZS1 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.89□□□□□ -2.11
POLR1EQ9GZS1 RPS29P15-201ENST00000458329 171 ntBASIC1.89□□□□□ -2.11
POLR1EQ9GZS1 RNA5SP57-201ENST00000459463 123 ntBASIC1.89□□□□□ -2.11
POLR1EQ9GZS1 MTCO3P9-201ENST00000506989 781 ntBASIC1.89□□□□□ -2.11
POLR1EQ9GZS1 AC107393.1-201ENST00000512403 346 ntBASIC1.89□□□□□ -2.11
POLR1EQ9GZS1 RNU6-965P-201ENST00000516721 96 ntBASIC1.89□□□□□ -2.11
POLR1EQ9GZS1 RNA5SP364-201ENST00000516938 78 ntBASIC1.89□□□□□ -2.11
POLR1EQ9GZS1 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.89□□□□□ -2.11
POLR1EQ9GZS1 MIR3935-201ENST00000583472 104 ntBASIC1.89□□□□□ -2.11
POLR1EQ9GZS1 AC040904.1-201ENST00000590850 223 ntBASIC1.89□□□□□ -2.11
POLR1EQ9GZS1 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.89□□□□□ -2.11
POLR1EQ9GZS1 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
POLR1EQ9GZS1 U6.114-201ENST00000636407 96 ntBASIC1.89□□□□□ -2.11
POLR1EQ9GZS1 RNU6-181P-201ENST00000363225 107 ntBASIC1.88□□□□□ -2.11
POLR1EQ9GZS1 RNU6-1097P-201ENST00000363586 107 ntBASIC1.88□□□□□ -2.11
POLR1EQ9GZS1 RNU6-743P-201ENST00000364151 106 ntBASIC1.88□□□□□ -2.11
POLR1EQ9GZS1 SNORD116-8-201ENST00000384365 95 ntBASIC1.88□□□□□ -2.11
POLR1EQ9GZS1 RNU11-3P-201ENST00000391111 133 ntBASIC1.88□□□□□ -2.11
POLR1EQ9GZS1 RNU6-607P-201ENST00000411283 108 ntBASIC1.88□□□□□ -2.11
POLR1EQ9GZS1 POLHP1-201ENST00000411806 470 ntBASIC1.88□□□□□ -2.11
POLR1EQ9GZS1 USP9YP18-201ENST00000425912 695 ntBASIC1.88□□□□□ -2.11
POLR1EQ9GZS1 MTND2P29-201ENST00000438595 412 ntBASIC1.88□□□□□ -2.11
POLR1EQ9GZS1 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.88□□□□□ -2.11
POLR1EQ9GZS1 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.88□□□□□ -2.11
POLR1EQ9GZS1 AC117532.1-201ENST00000514638 323 ntBASIC1.88□□□□□ -2.11
POLR1EQ9GZS1 RNU6-445P-201ENST00000516949 107 ntBASIC1.88□□□□□ -2.11
POLR1EQ9GZS1 AC026407.1-201ENST00000518369 204 ntBASIC1.88□□□□□ -2.11
POLR1EQ9GZS1 AP005660.1-201ENST00000522972 293 ntBASIC1.88□□□□□ -2.11
POLR1EQ9GZS1 AP005639.2-201ENST00000527592 928 ntBASIC1.88□□□□□ -2.11
POLR1EQ9GZS1 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.88□□□□□ -2.11
POLR1EQ9GZS1 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.88□□□□□ -2.11
POLR1EQ9GZS1 OR11H5P-201ENST00000554039 926 ntBASIC1.88□□□□□ -2.11
POLR1EQ9GZS1 AC110588.1-201ENST00000559699 137 ntBASIC1.88□□□□□ -2.11
POLR1EQ9GZS1 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.88□□□□□ -2.11
POLR1EQ9GZS1 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.88□□□□□ -2.11
POLR1EQ9GZS1 AC009318.2-201ENST00000610917 651 ntBASIC1.88□□□□□ -2.11
POLR1EQ9GZS1 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.88□□□□□ -2.11
POLR1EQ9GZS1 RMST_4.1-201ENST00000616886 107 ntBASIC1.88□□□□□ -2.11
POLR1EQ9GZS1 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
POLR1EQ9GZS1 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.87□□□□□ -2.11
POLR1EQ9GZS1 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
POLR1EQ9GZS1 RNU6-1287P-201ENST00000362914 107 ntBASIC1.87□□□□□ -2.11
POLR1EQ9GZS1 RNU6-944P-201ENST00000364023 107 ntBASIC1.87□□□□□ -2.11
POLR1EQ9GZS1 RNU5E-7P-201ENST00000365290 117 ntBASIC1.87□□□□□ -2.11
POLR1EQ9GZS1 RNU6-1029P-201ENST00000384109 107 ntBASIC1.87□□□□□ -2.11
POLR1EQ9GZS1 RNU6-348P-201ENST00000384386 107 ntBASIC1.87□□□□□ -2.11
POLR1EQ9GZS1 RNU6-45P-201ENST00000384471 107 ntBASIC1.87□□□□□ -2.11
POLR1EQ9GZS1 RNU6-1060P-201ENST00000384664 107 ntBASIC1.87□□□□□ -2.11
POLR1EQ9GZS1 MIR583-201ENST00000384846 75 ntBASIC1.87□□□□□ -2.11
POLR1EQ9GZS1 RNA5SP212-201ENST00000391223 107 ntBASIC1.87□□□□□ -2.11
POLR1EQ9GZS1 MIR1262-201ENST00000408276 93 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms