Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 CENPCP1-201ENST00000533085 2578 ntBASIC2.15□□□□□ -2.07
CCSER1Q9C0I3 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.14□□□□□ -2.07
CCSER1Q9C0I3 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CCSER1Q9C0I3 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CCSER1Q9C0I3 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.14□□□□□ -2.07
CCSER1Q9C0I3 RNU5A-6P-201ENST00000384136 116 ntBASIC2.14□□□□□ -2.07
CCSER1Q9C0I3 RNU6-1103P-201ENST00000384150 107 ntBASIC2.14□□□□□ -2.07
CCSER1Q9C0I3 MIR1-2-201ENST00000384961 85 ntBASIC2.14□□□□□ -2.07
CCSER1Q9C0I3 MIR454-201ENST00000390180 115 ntBASIC2.14□□□□□ -2.07
CCSER1Q9C0I3 RNA5SP111-201ENST00000411386 101 ntBASIC2.14□□□□□ -2.07
CCSER1Q9C0I3 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.14□□□□□ -2.07
CCSER1Q9C0I3 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.14□□□□□ -2.07
CCSER1Q9C0I3 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.14□□□□□ -2.07
CCSER1Q9C0I3 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.14□□□□□ -2.07
CCSER1Q9C0I3 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.14□□□□□ -2.07
CCSER1Q9C0I3 RNA5SP233-201ENST00000459153 113 ntBASIC2.14□□□□□ -2.07
CCSER1Q9C0I3 RPS3AP17-201ENST00000472594 777 ntBASIC2.14□□□□□ -2.07
CCSER1Q9C0I3 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.14□□□□□ -2.07
CCSER1Q9C0I3 MTCO3P7-201ENST00000510008 774 ntBASIC2.14□□□□□ -2.07
CCSER1Q9C0I3 AC091133.4-201ENST00000511142 308 ntBASIC2.14□□□□□ -2.07
CCSER1Q9C0I3 RNU2-53P-201ENST00000516257 147 ntBASIC2.14□□□□□ -2.07
CCSER1Q9C0I3 RNU6-685P-201ENST00000517088 95 ntBASIC2.14□□□□□ -2.07
CCSER1Q9C0I3 SNORA31.25-201ENST00000517242 134 ntBASIC2.14□□□□□ -2.07
CCSER1Q9C0I3 RNU6-586P-201ENST00000517265 104 ntBASIC2.14□□□□□ -2.07
CCSER1Q9C0I3 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.14□□□□□ -2.07
CCSER1Q9C0I3 MTCYBP33-201ENST00000575007 1130 ntBASIC2.14□□□□□ -2.07
CCSER1Q9C0I3 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.14□□□□□ -2.07
CCSER1Q9C0I3 Z84480.1-201ENST00000605131 311 ntBASIC2.14□□□□□ -2.07
CCSER1Q9C0I3 AC104073.3-201ENST00000610942 955 ntBASIC2.14□□□□□ -2.07
CCSER1Q9C0I3 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CCSER1Q9C0I3 AC008555.8-201ENST00000623602 2168 ntBASIC2.14□□□□□ -2.07
CCSER1Q9C0I3 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
CCSER1Q9C0I3 SNORD115-7-201ENST00000365306 82 ntBASIC2.13□□□□□ -2.07
CCSER1Q9C0I3 SNORA25B-201ENST00000365507 128 ntBASIC2.13□□□□□ -2.07
CCSER1Q9C0I3 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CCSER1Q9C0I3 Y_RNA.436-201ENST00000384097 102 ntBASIC2.13□□□□□ -2.07
CCSER1Q9C0I3 Y_RNA.559-201ENST00000384686 107 ntBASIC2.13□□□□□ -2.07
CCSER1Q9C0I3 MIR186-201ENST00000384988 86 ntBASIC2.13□□□□□ -2.07
CCSER1Q9C0I3 SNORA46.1-201ENST00000391069 153 ntBASIC2.13□□□□□ -2.07
CCSER1Q9C0I3 RNA5SP390-201ENST00000410191 113 ntBASIC2.13□□□□□ -2.07
CCSER1Q9C0I3 RNU2-16P-201ENST00000410712 136 ntBASIC2.13□□□□□ -2.07
CCSER1Q9C0I3 AL356379.1-201ENST00000414105 126 ntBASIC2.13□□□□□ -2.07
CCSER1Q9C0I3 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.13□□□□□ -2.07
CCSER1Q9C0I3 MTCYBP5-201ENST00000423752 1135 ntBASIC2.13□□□□□ -2.07
CCSER1Q9C0I3 USP9YP14-201ENST00000430663 563 ntBASIC2.13□□□□□ -2.07
CCSER1Q9C0I3 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.13□□□□□ -2.07
CCSER1Q9C0I3 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.13□□□□□ -2.07
CCSER1Q9C0I3 AC108078.1-201ENST00000508073 725 ntBASIC2.13□□□□□ -2.07
CCSER1Q9C0I3 RBBP4P6-201ENST00000508098 202 ntBASIC2.13□□□□□ -2.07
CCSER1Q9C0I3 AC010493.1-201ENST00000513479 292 ntBASIC2.13□□□□□ -2.07
CCSER1Q9C0I3 RNU2-19P-201ENST00000517288 84 ntBASIC2.13□□□□□ -2.07
CCSER1Q9C0I3 AP003392.2-201ENST00000527269 208 ntBASIC2.13□□□□□ -2.07
CCSER1Q9C0I3 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.13□□□□□ -2.07
CCSER1Q9C0I3 SUB1P2-201ENST00000556401 297 ntBASIC2.13□□□□□ -2.07
CCSER1Q9C0I3 MIR4775-201ENST00000581168 75 ntBASIC2.13□□□□□ -2.07
CCSER1Q9C0I3 AC103987.3-201ENST00000582071 292 ntBASIC2.13□□□□□ -2.07
CCSER1Q9C0I3 AC091805.2-201ENST00000603848 235 ntBASIC2.13□□□□□ -2.07
CCSER1Q9C0I3 AL670379.2-201ENST00000604983 252 ntBASIC2.13□□□□□ -2.07
CCSER1Q9C0I3 AL670379.4-201ENST00000605279 254 ntBASIC2.13□□□□□ -2.07
CCSER1Q9C0I3 AL354685.2-201ENST00000448218 1447 ntBASIC2.13□□□□□ -2.07
CCSER1Q9C0I3 RNU6-942P-201ENST00000363002 107 ntBASIC2.12□□□□□ -2.07
CCSER1Q9C0I3 RNU4-75P-201ENST00000364621 146 ntBASIC2.12□□□□□ -2.07
CCSER1Q9C0I3 RNU4-48P-201ENST00000365559 182 ntBASIC2.12□□□□□ -2.07
CCSER1Q9C0I3 Y_RNA.576-201ENST00000384781 102 ntBASIC2.12□□□□□ -2.07
CCSER1Q9C0I3 MIR676-201ENST00000390702 67 ntBASIC2.12□□□□□ -2.07
CCSER1Q9C0I3 U8.13-201ENST00000390842 128 ntBASIC2.12□□□□□ -2.07
CCSER1Q9C0I3 RNU2-66P-201ENST00000410650 161 ntBASIC2.12□□□□□ -2.07
CCSER1Q9C0I3 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.12□□□□□ -2.07
CCSER1Q9C0I3 EIF1AXP1-201ENST00000419267 435 ntBASIC2.12□□□□□ -2.07
CCSER1Q9C0I3 AC010975.2-201ENST00000427781 588 ntBASIC2.12□□□□□ -2.07
CCSER1Q9C0I3 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.12□□□□□ -2.07
CCSER1Q9C0I3 AC104058.1-201ENST00000448028 297 ntBASIC2.12□□□□□ -2.07
CCSER1Q9C0I3 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.12□□□□□ -2.07
CCSER1Q9C0I3 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.12□□□□□ -2.07
CCSER1Q9C0I3 PMCHL2-203ENST00000457791 237 ntBASIC2.12□□□□□ -2.07
CCSER1Q9C0I3 RNU7-182P-201ENST00000459009 62 ntBASIC2.12□□□□□ -2.07
CCSER1Q9C0I3 HMGB1P29-201ENST00000505659 499 ntBASIC2.12□□□□□ -2.07
CCSER1Q9C0I3 RNA5SP182-201ENST00000516064 82 ntBASIC2.12□□□□□ -2.07
CCSER1Q9C0I3 AC034114.1-201ENST00000520293 285 ntBASIC2.12□□□□□ -2.07
CCSER1Q9C0I3 OR5AL2P-201ENST00000532185 920 ntBASIC2.12□□□□□ -2.07
CCSER1Q9C0I3 IMMP1LP2-201ENST00000552954 492 ntBASIC2.12□□□□□ -2.07
CCSER1Q9C0I3 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.12□□□□□ -2.07
CCSER1Q9C0I3 AC025678.1-201ENST00000567861 338 ntBASIC2.12□□□□□ -2.07
CCSER1Q9C0I3 DEFB131E-202ENST00000602581 683 ntBASIC2.12□□□□□ -2.07
CCSER1Q9C0I3 AC064807.4-201ENST00000607201 407 ntBASIC2.12□□□□□ -2.07
CCSER1Q9C0I3 AC103591.3-201ENST00000608684 209 ntBASIC2.12□□□□□ -2.07
CCSER1Q9C0I3 AL162373.1-201ENST00000620433 407 ntBASIC2.12□□□□□ -2.07
CCSER1Q9C0I3 SDR42E1P4-201ENST00000620894 481 ntBASIC2.12□□□□□ -2.07
CCSER1Q9C0I3 U6.114-201ENST00000636407 96 ntBASIC2.12□□□□□ -2.07
CCSER1Q9C0I3 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CCSER1Q9C0I3 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.11□□□□□ -2.07
CCSER1Q9C0I3 RNU6-655P-201ENST00000362858 107 ntBASIC2.11□□□□□ -2.07
CCSER1Q9C0I3 SNORD3E-201ENST00000362899 217 ntBASIC2.11□□□□□ -2.07
CCSER1Q9C0I3 RNU6-1120P-201ENST00000362988 108 ntBASIC2.11□□□□□ -2.07
CCSER1Q9C0I3 RNU6-623P-201ENST00000363143 105 ntBASIC2.11□□□□□ -2.07
CCSER1Q9C0I3 Y_RNA.159-201ENST00000363674 87 ntBASIC2.11□□□□□ -2.07
CCSER1Q9C0I3 SNORA62.1-201ENST00000364287 154 ntBASIC2.11□□□□□ -2.07
CCSER1Q9C0I3 Y_RNA.296-201ENST00000364930 108 ntBASIC2.11□□□□□ -2.07
CCSER1Q9C0I3 Y_RNA.318-201ENST00000365131 97 ntBASIC2.11□□□□□ -2.07
CCSER1Q9C0I3 SNORD116-20-201ENST00000384529 92 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms