Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
LRRC3Q9BY71 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
LRRC3Q9BY71 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
LRRC3Q9BY71 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.96□□□□□ -1.78
LRRC3Q9BY71 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
LRRC3Q9BY71 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
LRRC3Q9BY71 RNU4-56P-201ENST00000364700 142 ntBASIC3.96□□□□□ -1.78
LRRC3Q9BY71 SNORA36A-201ENST00000384221 132 ntBASIC3.96□□□□□ -1.78
LRRC3Q9BY71 Y_RNA.562-201ENST00000384695 113 ntBASIC3.96□□□□□ -1.78
LRRC3Q9BY71 MIR183-201ENST00000384958 110 ntBASIC3.96□□□□□ -1.78
LRRC3Q9BY71 SNORD115-46-201ENST00000390982 71 ntBASIC3.96□□□□□ -1.78
LRRC3Q9BY71 RNU2-20P-201ENST00000410425 191 ntBASIC3.96□□□□□ -1.78
LRRC3Q9BY71 AC009310.1-201ENST00000414414 451 ntBASIC3.96□□□□□ -1.78
LRRC3Q9BY71 EIF1P2-201ENST00000428233 350 ntBASIC3.96□□□□□ -1.78
LRRC3Q9BY71 SNORA71B-202ENST00000439232 272 ntBASIC3.96□□□□□ -1.78
LRRC3Q9BY71 AC010099.1-201ENST00000455434 375 ntBASIC3.96□□□□□ -1.78
LRRC3Q9BY71 snoU13.6-201ENST00000458785 104 ntBASIC3.96□□□□□ -1.78
LRRC3Q9BY71 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC3.96□□□□□ -1.78
LRRC3Q9BY71 AP001025.1-201ENST00000486139 332 ntBASIC3.96□□□□□ -1.78
LRRC3Q9BY71 RAC1P2-201ENST00000511164 579 ntBASIC3.96□□□□□ -1.78
LRRC3Q9BY71 AC026726.1-201ENST00000512859 601 ntBASIC3.96□□□□□ -1.78
LRRC3Q9BY71 DEFB108E-201ENST00000524692 240 ntBASIC3.96□□□□□ -1.78
LRRC3Q9BY71 AC115990.1-201ENST00000526957 301 ntBASIC3.96□□□□□ -1.78
LRRC3Q9BY71 GNRHR2P1-201ENST00000555315 631 ntBASIC3.96□□□□□ -1.78
LRRC3Q9BY71 AC136932.1-201ENST00000574771 208 ntBASIC3.96□□□□□ -1.78
LRRC3Q9BY71 AC012433.1-201ENST00000588916 398 ntBASIC3.96□□□□□ -1.78
LRRC3Q9BY71 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.96□□□□□ -1.78
LRRC3Q9BY71 AC019176.2-201ENST00000611579 315 ntBASIC3.96□□□□□ -1.78
LRRC3Q9BY71 AC141273.2-201ENST00000618989 130 ntBASIC3.96□□□□□ -1.78
LRRC3Q9BY71 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
LRRC3Q9BY71 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.96□□□□□ -1.78
LRRC3Q9BY71 AC002546.1-201ENST00000588041 2504 ntBASIC3.95□□□□□ -1.78
LRRC3Q9BY71 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LRRC3Q9BY71 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LRRC3Q9BY71 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
LRRC3Q9BY71 AF127577.6-201ENST00000623352 2191 ntBASIC3.95□□□□□ -1.78
LRRC3Q9BY71 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.95□□□□□ -1.78
LRRC3Q9BY71 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LRRC3Q9BY71 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LRRC3Q9BY71 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.95□□□□□ -1.78
LRRC3Q9BY71 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.95□□□□□ -1.78
LRRC3Q9BY71 SNORD81.1-201ENST00000363064 77 ntBASIC3.95□□□□□ -1.78
LRRC3Q9BY71 SNORD27-201ENST00000363981 72 ntBASIC3.95□□□□□ -1.78
LRRC3Q9BY71 MIR215-201ENST00000384858 110 ntBASIC3.95□□□□□ -1.78
LRRC3Q9BY71 MIR147B-201ENST00000390185 80 ntBASIC3.95□□□□□ -1.78
LRRC3Q9BY71 MRPL35P1-201ENST00000404272 572 ntBASIC3.95□□□□□ -1.78
LRRC3Q9BY71 SNORD12B-201ENST00000410433 91 ntBASIC3.95□□□□□ -1.78
LRRC3Q9BY71 RNU2-49P-201ENST00000410666 184 ntBASIC3.95□□□□□ -1.78
LRRC3Q9BY71 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.95□□□□□ -1.78
LRRC3Q9BY71 RAC1P3-201ENST00000416129 580 ntBASIC3.95□□□□□ -1.78
LRRC3Q9BY71 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.95□□□□□ -1.78
LRRC3Q9BY71 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.95□□□□□ -1.78
LRRC3Q9BY71 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.95□□□□□ -1.78
LRRC3Q9BY71 WARS2P1-201ENST00000429678 537 ntBASIC3.95□□□□□ -1.78
LRRC3Q9BY71 AL445305.1-201ENST00000432577 575 ntBASIC3.95□□□□□ -1.78
LRRC3Q9BY71 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.95□□□□□ -1.78
LRRC3Q9BY71 SNORA31.6-201ENST00000516241 130 ntBASIC3.95□□□□□ -1.78
LRRC3Q9BY71 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.95□□□□□ -1.78
LRRC3Q9BY71 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.95□□□□□ -1.78
LRRC3Q9BY71 AC027288.2-201ENST00000553028 243 ntBASIC3.95□□□□□ -1.78
LRRC3Q9BY71 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.95□□□□□ -1.78
LRRC3Q9BY71 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.95□□□□□ -1.78
LRRC3Q9BY71 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.95□□□□□ -1.78
LRRC3Q9BY71 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
LRRC3Q9BY71 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.95□□□□□ -1.78
LRRC3Q9BY71 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.95□□□□□ -1.78
LRRC3Q9BY71 AL391261.4-201ENST00000616012 481 ntBASIC3.95□□□□□ -1.78
LRRC3Q9BY71 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.95□□□□□ -1.78
LRRC3Q9BY71 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.95□□□□□ -1.78
LRRC3Q9BY71 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LRRC3Q9BY71 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.95□□□□□ -1.78
LRRC3Q9BY71 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.95□□□□□ -1.78
LRRC3Q9BY71 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LRRC3Q9BY71 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.95□□□□□ -1.78
LRRC3Q9BY71 AC002543.1-201ENST00000299783 1954 ntBASIC3.94□□□□□ -1.78
LRRC3Q9BY71 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
LRRC3Q9BY71 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.94□□□□□ -1.78
LRRC3Q9BY71 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
LRRC3Q9BY71 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
LRRC3Q9BY71 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
LRRC3Q9BY71 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
LRRC3Q9BY71 Y_RNA.54-201ENST00000362766 105 ntBASIC3.94□□□□□ -1.78
LRRC3Q9BY71 Y_RNA.237-201ENST00000364439 102 ntBASIC3.94□□□□□ -1.78
LRRC3Q9BY71 Y_RNA.333-201ENST00000365274 102 ntBASIC3.94□□□□□ -1.78
LRRC3Q9BY71 RNU6-937P-201ENST00000384325 106 ntBASIC3.94□□□□□ -1.78
LRRC3Q9BY71 RNA5SP38-201ENST00000410750 119 ntBASIC3.94□□□□□ -1.78
LRRC3Q9BY71 AC245291.1-201ENST00000419501 328 ntBASIC3.94□□□□□ -1.78
LRRC3Q9BY71 AL590135.1-201ENST00000422215 156 ntBASIC3.94□□□□□ -1.78
LRRC3Q9BY71 AC019205.3-201ENST00000424573 156 ntBASIC3.94□□□□□ -1.78
LRRC3Q9BY71 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.94□□□□□ -1.78
LRRC3Q9BY71 AC096638.1-201ENST00000444678 216 ntBASIC3.94□□□□□ -1.78
LRRC3Q9BY71 RPL7P49-201ENST00000471402 708 ntBASIC3.94□□□□□ -1.78
LRRC3Q9BY71 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.94□□□□□ -1.78
LRRC3Q9BY71 RNU6-567P-201ENST00000516746 107 ntBASIC3.94□□□□□ -1.78
LRRC3Q9BY71 SNORD19.2-201ENST00000516978 73 ntBASIC3.94□□□□□ -1.78
LRRC3Q9BY71 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.94□□□□□ -1.78
LRRC3Q9BY71 UBL5P4-201ENST00000562584 236 ntBASIC3.94□□□□□ -1.78
LRRC3Q9BY71 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.94□□□□□ -1.78
LRRC3Q9BY71 AL138880.2-201ENST00000616214 239 ntBASIC3.94□□□□□ -1.78
LRRC3Q9BY71 AC012314.7-201ENST00000619693 93 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 147.3 ms