Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 RNU6-1271P-201ENST00000517049 105 ntBASIC3.48□□□□□ -1.85
SALL3Q9BXA9 H3F3AP1-201ENST00000559984 334 ntBASIC3.48□□□□□ -1.85
SALL3Q9BXA9 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.48□□□□□ -1.85
SALL3Q9BXA9 MIR548AC-201ENST00000585049 88 ntBASIC3.48□□□□□ -1.85
SALL3Q9BXA9 AC024153.1-201ENST00000603103 365 ntBASIC3.48□□□□□ -1.85
SALL3Q9BXA9 AC018889.1-201ENST00000605372 397 ntBASIC3.48□□□□□ -1.85
SALL3Q9BXA9 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SALL3Q9BXA9 AL021879.1-201ENST00000611756 288 ntBASIC3.48□□□□□ -1.85
SALL3Q9BXA9 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.48□□□□□ -1.85
SALL3Q9BXA9 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SALL3Q9BXA9 AC092593.1-201ENST00000515413 1815 ntBASIC3.48□□□□□ -1.85
SALL3Q9BXA9 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SALL3Q9BXA9 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SALL3Q9BXA9 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SALL3Q9BXA9 RNU6-851P-201ENST00000384565 107 ntBASIC3.47□□□□□ -1.85
SALL3Q9BXA9 RNU6-1222P-201ENST00000384615 107 ntBASIC3.47□□□□□ -1.85
SALL3Q9BXA9 MIR512-1-201ENST00000384913 84 ntBASIC3.47□□□□□ -1.85
SALL3Q9BXA9 MIR517A-201ENST00000385001 87 ntBASIC3.47□□□□□ -1.85
SALL3Q9BXA9 AL513331.1-201ENST00000411908 397 ntBASIC3.47□□□□□ -1.85
SALL3Q9BXA9 YPEL5P1-201ENST00000419731 367 ntBASIC3.47□□□□□ -1.85
SALL3Q9BXA9 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.47□□□□□ -1.85
SALL3Q9BXA9 DPH3P2-201ENST00000422618 250 ntBASIC3.47□□□□□ -1.85
SALL3Q9BXA9 MTCO1P39-201ENST00000426148 480 ntBASIC3.47□□□□□ -1.85
SALL3Q9BXA9 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.47□□□□□ -1.85
SALL3Q9BXA9 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.47□□□□□ -1.85
SALL3Q9BXA9 RPL23AP50-201ENST00000434149 455 ntBASIC3.47□□□□□ -1.85
SALL3Q9BXA9 AC244505.4-201ENST00000434905 287 ntBASIC3.47□□□□□ -1.85
SALL3Q9BXA9 Z98949.2-201ENST00000440996 144 ntBASIC3.47□□□□□ -1.85
SALL3Q9BXA9 AL135938.1-201ENST00000443141 297 ntBASIC3.47□□□□□ -1.85
SALL3Q9BXA9 SSXP5-201ENST00000443473 287 ntBASIC3.47□□□□□ -1.85
SALL3Q9BXA9 RPL23AP31-201ENST00000456160 467 ntBASIC3.47□□□□□ -1.85
SALL3Q9BXA9 RNU7-187P-201ENST00000458985 68 ntBASIC3.47□□□□□ -1.85
SALL3Q9BXA9 AC083906.5-201ENST00000503722 328 ntBASIC3.47□□□□□ -1.85
SALL3Q9BXA9 AC079600.2-201ENST00000550076 130 ntBASIC3.47□□□□□ -1.85
SALL3Q9BXA9 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.47□□□□□ -1.85
SALL3Q9BXA9 Z98751.3-201ENST00000604447 521 ntBASIC3.47□□□□□ -1.85
SALL3Q9BXA9 ELOCP5-201ENST00000604924 333 ntBASIC3.47□□□□□ -1.85
SALL3Q9BXA9 RNU6-85P-201ENST00000605989 107 ntBASIC3.47□□□□□ -1.85
SALL3Q9BXA9 AC100812.1-201ENST00000607622 580 ntBASIC3.47□□□□□ -1.85
SALL3Q9BXA9 AL138825.1-201ENST00000618587 192 ntBASIC3.47□□□□□ -1.85
SALL3Q9BXA9 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
SALL3Q9BXA9 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.47□□□□□ -1.85
SALL3Q9BXA9 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
SALL3Q9BXA9 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.47□□□□□ -1.85
SALL3Q9BXA9 AC091812.1-201ENST00000432235 1948 ntBASIC3.47□□□□□ -1.85
SALL3Q9BXA9 ZNF826P-207ENST00000622273 1910 ntBASIC3.47□□□□□ -1.85
SALL3Q9BXA9 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.47□□□□□ -1.85
SALL3Q9BXA9 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.85
SALL3Q9BXA9 Y_RNA.151-201ENST00000363566 112 ntBASIC3.46□□□□□ -1.85
SALL3Q9BXA9 RNU6-99P-201ENST00000364721 107 ntBASIC3.46□□□□□ -1.85
SALL3Q9BXA9 RNU6-1303P-201ENST00000364841 107 ntBASIC3.46□□□□□ -1.85
SALL3Q9BXA9 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.85
SALL3Q9BXA9 Y_RNA.577-201ENST00000384794 101 ntBASIC3.46□□□□□ -1.85
SALL3Q9BXA9 MIR578-201ENST00000384828 96 ntBASIC3.46□□□□□ -1.85
SALL3Q9BXA9 MIR301A-201ENST00000385261 86 ntBASIC3.46□□□□□ -1.85
SALL3Q9BXA9 MIR548I3-201ENST00000408378 149 ntBASIC3.46□□□□□ -1.85
SALL3Q9BXA9 MIR548I1-201ENST00000408810 149 ntBASIC3.46□□□□□ -1.85
SALL3Q9BXA9 CYCSP33-201ENST00000414485 327 ntBASIC3.46□□□□□ -1.85
SALL3Q9BXA9 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.46□□□□□ -1.85
SALL3Q9BXA9 HMGN2P20-201ENST00000437531 273 ntBASIC3.46□□□□□ -1.85
SALL3Q9BXA9 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.46□□□□□ -1.85
SALL3Q9BXA9 DAP3P1-201ENST00000441522 278 ntBASIC3.46□□□□□ -1.85
SALL3Q9BXA9 HSPE1P6-201ENST00000479457 291 ntBASIC3.46□□□□□ -1.85
SALL3Q9BXA9 RPL17P19-201ENST00000489069 552 ntBASIC3.46□□□□□ -1.85
SALL3Q9BXA9 AC093852.1-201ENST00000503587 266 ntBASIC3.46□□□□□ -1.85
SALL3Q9BXA9 MTND3P25-201ENST00000509243 135 ntBASIC3.46□□□□□ -1.85
SALL3Q9BXA9 Y_RNA.668-201ENST00000516233 93 ntBASIC3.46□□□□□ -1.85
SALL3Q9BXA9 SNORA31.8-201ENST00000516327 108 ntBASIC3.46□□□□□ -1.85
SALL3Q9BXA9 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
SALL3Q9BXA9 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.46□□□□□ -1.85
SALL3Q9BXA9 FAM60BP-201ENST00000578364 658 ntBASIC3.46□□□□□ -1.85
SALL3Q9BXA9 MIR1273C-201ENST00000578669 77 ntBASIC3.46□□□□□ -1.85
SALL3Q9BXA9 OR1M4P-201ENST00000589199 287 ntBASIC3.46□□□□□ -1.85
SALL3Q9BXA9 AC093732.2-201ENST00000607950 274 ntBASIC3.46□□□□□ -1.85
SALL3Q9BXA9 AC107871.2-201ENST00000612894 502 ntBASIC3.46□□□□□ -1.85
SALL3Q9BXA9 MIR6715A-201ENST00000615929 79 ntBASIC3.46□□□□□ -1.85
SALL3Q9BXA9 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.85
SALL3Q9BXA9 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.46□□□□□ -1.85
SALL3Q9BXA9 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
SALL3Q9BXA9 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
SALL3Q9BXA9 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SALL3Q9BXA9 AC000403.1-201ENST00000613696 3585 ntBASIC3.46□□□□□ -1.86
SALL3Q9BXA9 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.46□□□□□ -1.86
SALL3Q9BXA9 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SALL3Q9BXA9 RNU6-1059P-201ENST00000363752 98 ntBASIC3.45□□□□□ -1.86
SALL3Q9BXA9 RNU1-140P-201ENST00000365040 165 ntBASIC3.45□□□□□ -1.86
SALL3Q9BXA9 Y_RNA.424-201ENST00000384063 103 ntBASIC3.45□□□□□ -1.86
SALL3Q9BXA9 AL030996.1-201ENST00000411430 235 ntBASIC3.45□□□□□ -1.86
SALL3Q9BXA9 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.45□□□□□ -1.86
SALL3Q9BXA9 HMGB1P9-201ENST00000429856 646 ntBASIC3.45□□□□□ -1.86
SALL3Q9BXA9 AL133396.1-201ENST00000432048 687 ntBASIC3.45□□□□□ -1.86
SALL3Q9BXA9 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.45□□□□□ -1.86
SALL3Q9BXA9 AC010655.3-201ENST00000478818 450 ntBASIC3.45□□□□□ -1.86
SALL3Q9BXA9 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.45□□□□□ -1.86
SALL3Q9BXA9 RPL22P13-201ENST00000493291 347 ntBASIC3.45□□□□□ -1.86
SALL3Q9BXA9 AC091826.1-201ENST00000514065 313 ntBASIC3.45□□□□□ -1.86
SALL3Q9BXA9 RNU6-120P-201ENST00000516077 103 ntBASIC3.45□□□□□ -1.86
SALL3Q9BXA9 SNORA40.14-201ENST00000516543 86 ntBASIC3.45□□□□□ -1.86
SALL3Q9BXA9 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.45□□□□□ -1.86
SALL3Q9BXA9 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms