Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 RNU4-52P-201ENST00000384209 138 ntBASIC1.68□□□□□ -2.14
FOXC2Q99958 U8.10-201ENST00000384260 133 ntBASIC1.68□□□□□ -2.14
FOXC2Q99958 SNORA51.11-201ENST00000384442 131 ntBASIC1.68□□□□□ -2.14
FOXC2Q99958 SNORA67.5-201ENST00000391036 107 ntBASIC1.68□□□□□ -2.14
FOXC2Q99958 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.68□□□□□ -2.14
FOXC2Q99958 AC138623.1-201ENST00000418060 216 ntBASIC1.68□□□□□ -2.14
FOXC2Q99958 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.68□□□□□ -2.14
FOXC2Q99958 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.68□□□□□ -2.14
FOXC2Q99958 PIGFP2-201ENST00000421400 651 ntBASIC1.68□□□□□ -2.14
FOXC2Q99958 RPL31P35-201ENST00000431058 377 ntBASIC1.68□□□□□ -2.14
FOXC2Q99958 MTCO3P5-201ENST00000433620 714 ntBASIC1.68□□□□□ -2.14
FOXC2Q99958 MTCO2P16-201ENST00000436962 677 ntBASIC1.68□□□□□ -2.14
FOXC2Q99958 DNAJC19P4-201ENST00000440115 345 ntBASIC1.68□□□□□ -2.14
FOXC2Q99958 NDUFB1P2-201ENST00000449477 176 ntBASIC1.68□□□□□ -2.14
FOXC2Q99958 MTCO2P18-201ENST00000457151 658 ntBASIC1.68□□□□□ -2.14
FOXC2Q99958 AC104435.1-201ENST00000483483 166 ntBASIC1.68□□□□□ -2.14
FOXC2Q99958 MTAPP1-201ENST00000489154 819 ntBASIC1.68□□□□□ -2.14
FOXC2Q99958 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.68□□□□□ -2.14
FOXC2Q99958 AC079140.3-201ENST00000511111 550 ntBASIC1.68□□□□□ -2.14
FOXC2Q99958 RNU6-586P-201ENST00000517265 104 ntBASIC1.68□□□□□ -2.14
FOXC2Q99958 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.68□□□□□ -2.14
FOXC2Q99958 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.68□□□□□ -2.14
FOXC2Q99958 MIR3913-1-201ENST00000577744 102 ntBASIC1.68□□□□□ -2.14
FOXC2Q99958 PIGPP4-201ENST00000584447 307 ntBASIC1.68□□□□□ -2.14
FOXC2Q99958 AC073410.2-201ENST00000603240 332 ntBASIC1.68□□□□□ -2.14
FOXC2Q99958 AL096840.1-201ENST00000603287 93 ntBASIC1.68□□□□□ -2.14
FOXC2Q99958 ELOCP5-201ENST00000604924 333 ntBASIC1.68□□□□□ -2.14
FOXC2Q99958 AL121917.1-203ENST00000605534 577 ntBASIC1.68□□□□□ -2.14
FOXC2Q99958 AC098614.4-201ENST00000607601 462 ntBASIC1.68□□□□□ -2.14
FOXC2Q99958 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.68□□□□□ -2.14
FOXC2Q99958 AC012409.4-201ENST00000612923 249 ntBASIC1.68□□□□□ -2.14
FOXC2Q99958 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.68□□□□□ -2.14
FOXC2Q99958 AL359547.2-201ENST00000615810 418 ntBASIC1.68□□□□□ -2.14
FOXC2Q99958 AC138649.3-201ENST00000622154 254 ntBASIC1.68□□□□□ -2.14
FOXC2Q99958 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.68□□□□□ -2.14
FOXC2Q99958 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
FOXC2Q99958 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
FOXC2Q99958 MTND5P17-201ENST00000418405 1603 ntBASIC1.67□□□□□ -2.14
FOXC2Q99958 RNU6-1097P-201ENST00000363586 107 ntBASIC1.67□□□□□ -2.14
FOXC2Q99958 RNU6-371P-201ENST00000364283 108 ntBASIC1.67□□□□□ -2.14
FOXC2Q99958 RNU6-282P-201ENST00000365357 103 ntBASIC1.67□□□□□ -2.14
FOXC2Q99958 SNORD116-2-201ENST00000384274 95 ntBASIC1.67□□□□□ -2.14
FOXC2Q99958 SNORD116-6-201ENST00000384711 96 ntBASIC1.67□□□□□ -2.14
FOXC2Q99958 MIR518A2-201ENST00000384966 87 ntBASIC1.67□□□□□ -2.14
FOXC2Q99958 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
FOXC2Q99958 CDK8P2-201ENST00000415020 547 ntBASIC1.67□□□□□ -2.14
FOXC2Q99958 C1DP2-201ENST00000418167 426 ntBASIC1.67□□□□□ -2.14
FOXC2Q99958 AL627311.1-201ENST00000431514 115 ntBASIC1.67□□□□□ -2.14
FOXC2Q99958 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.67□□□□□ -2.14
FOXC2Q99958 AL360221.1-201ENST00000445989 335 ntBASIC1.67□□□□□ -2.14
FOXC2Q99958 MTND1P29-201ENST00000448112 647 ntBASIC1.67□□□□□ -2.14
FOXC2Q99958 AC132479.1-201ENST00000449160 144 ntBASIC1.67□□□□□ -2.14
FOXC2Q99958 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.67□□□□□ -2.14
FOXC2Q99958 PMCHL2-203ENST00000457791 237 ntBASIC1.67□□□□□ -2.14
FOXC2Q99958 RPL31P3-201ENST00000458430 332 ntBASIC1.67□□□□□ -2.14
FOXC2Q99958 SNORD13-201ENST00000459299 104 ntBASIC1.67□□□□□ -2.14
FOXC2Q99958 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.67□□□□□ -2.14
FOXC2Q99958 HMGB1P35-201ENST00000503360 598 ntBASIC1.67□□□□□ -2.14
FOXC2Q99958 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.67□□□□□ -2.14
FOXC2Q99958 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.67□□□□□ -2.14
FOXC2Q99958 AC117522.1-201ENST00000509821 380 ntBASIC1.67□□□□□ -2.14
FOXC2Q99958 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.67□□□□□ -2.14
FOXC2Q99958 MRPS17P9-201ENST00000511924 393 ntBASIC1.67□□□□□ -2.14
FOXC2Q99958 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.67□□□□□ -2.14
FOXC2Q99958 MTCO2P4-201ENST00000517968 247 ntBASIC1.67□□□□□ -2.14
FOXC2Q99958 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.67□□□□□ -2.14
FOXC2Q99958 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.67□□□□□ -2.14
FOXC2Q99958 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.67□□□□□ -2.14
FOXC2Q99958 IMMP1LP2-201ENST00000552954 492 ntBASIC1.67□□□□□ -2.14
FOXC2Q99958 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.67□□□□□ -2.14
FOXC2Q99958 AC026271.5-201ENST00000577873 130 ntBASIC1.67□□□□□ -2.14
FOXC2Q99958 AC245014.2-201ENST00000603689 287 ntBASIC1.67□□□□□ -2.14
FOXC2Q99958 SNRPGP17-201ENST00000603780 214 ntBASIC1.67□□□□□ -2.14
FOXC2Q99958 AC246785.4-201ENST00000605374 287 ntBASIC1.67□□□□□ -2.14
FOXC2Q99958 AC021646.1-201ENST00000605469 484 ntBASIC1.67□□□□□ -2.14
FOXC2Q99958 AL139286.2-201ENST00000606838 396 ntBASIC1.67□□□□□ -2.14
FOXC2Q99958 AC093788.1-201ENST00000609356 927 ntBASIC1.67□□□□□ -2.14
FOXC2Q99958 uc_338.15-201ENST00000615470 191 ntBASIC1.67□□□□□ -2.14
FOXC2Q99958 YWHAEP7-203ENST00000622054 312 ntBASIC1.67□□□□□ -2.14
FOXC2Q99958 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.67□□□□□ -2.14
FOXC2Q99958 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.67□□□□□ -2.14
FOXC2Q99958 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
FOXC2Q99958 RNU6-661P-201ENST00000362409 107 ntBASIC1.66□□□□□ -2.14
FOXC2Q99958 RNU6-181P-201ENST00000363225 107 ntBASIC1.66□□□□□ -2.14
FOXC2Q99958 RNY1P12-201ENST00000364251 105 ntBASIC1.66□□□□□ -2.14
FOXC2Q99958 Y_RNA.367-201ENST00000365544 101 ntBASIC1.66□□□□□ -2.14
FOXC2Q99958 RNU6-72P-201ENST00000384285 79 ntBASIC1.66□□□□□ -2.14
FOXC2Q99958 MIR186-201ENST00000384988 86 ntBASIC1.66□□□□□ -2.14
FOXC2Q99958 MIR676-201ENST00000390702 67 ntBASIC1.66□□□□□ -2.14
FOXC2Q99958 RNA5SP450-201ENST00000411206 102 ntBASIC1.66□□□□□ -2.14
FOXC2Q99958 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.66□□□□□ -2.14
FOXC2Q99958 AL139156.1-201ENST00000412785 841 ntBASIC1.66□□□□□ -2.14
FOXC2Q99958 EEF1A1P40-201ENST00000412883 573 ntBASIC1.66□□□□□ -2.14
FOXC2Q99958 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.66□□□□□ -2.14
FOXC2Q99958 BX295541.1-201ENST00000417774 250 ntBASIC1.66□□□□□ -2.14
FOXC2Q99958 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.66□□□□□ -2.14
FOXC2Q99958 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.66□□□□□ -2.14
FOXC2Q99958 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.66□□□□□ -2.14
FOXC2Q99958 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.66□□□□□ -2.14
FOXC2Q99958 AL353689.1-201ENST00000438895 199 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms