Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 HMGN2P15-201ENST00000585707 270 ntBASIC3.28□□□□□ -1.88
SMOQ99835 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.28□□□□□ -1.88
SMOQ99835 MIR622-201ENST00000638396 96 ntBASIC3.28□□□□□ -1.88
SMOQ99835 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SMOQ99835 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
SMOQ99835 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.28□□□□□ -1.89
SMOQ99835 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
SMOQ99835 AL353743.1-202ENST00000431724 1695 ntBASIC3.27□□□□□ -1.89
SMOQ99835 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
SMOQ99835 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.27□□□□□ -1.89
SMOQ99835 AC002546.1-201ENST00000588041 2504 ntBASIC3.27□□□□□ -1.89
SMOQ99835 CDC27P3-201ENST00000635418 1910 ntBASIC3.27□□□□□ -1.89
SMOQ99835 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
SMOQ99835 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
SMOQ99835 SNORD15B-201ENST00000384714 146 ntBASIC3.27□□□□□ -1.89
SMOQ99835 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
SMOQ99835 SNORA48.5-201ENST00000391143 135 ntBASIC3.27□□□□□ -1.89
SMOQ99835 EI24P2-201ENST00000397776 1076 ntBASIC3.27□□□□□ -1.89
SMOQ99835 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SMOQ99835 EIF4EP2-201ENST00000422816 654 ntBASIC3.27□□□□□ -1.89
SMOQ99835 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SMOQ99835 MTND5P22-201ENST00000458380 195 ntBASIC3.27□□□□□ -1.89
SMOQ99835 RPS4XP22-201ENST00000480755 780 ntBASIC3.27□□□□□ -1.89
SMOQ99835 AC021146.2-201ENST00000504736 556 ntBASIC3.27□□□□□ -1.89
SMOQ99835 RNU6-581P-201ENST00000516214 105 ntBASIC3.27□□□□□ -1.89
SMOQ99835 RNA5SP341-201ENST00000516261 117 ntBASIC3.27□□□□□ -1.89
SMOQ99835 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SMOQ99835 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.27□□□□□ -1.89
SMOQ99835 AC010653.1-201ENST00000571108 881 ntBASIC3.27□□□□□ -1.89
SMOQ99835 MIR5696-201ENST00000578474 85 ntBASIC3.27□□□□□ -1.89
SMOQ99835 MIR4325-201ENST00000583049 90 ntBASIC3.27□□□□□ -1.89
SMOQ99835 AC005000.2-201ENST00000605468 310 ntBASIC3.27□□□□□ -1.89
SMOQ99835 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.27□□□□□ -1.89
SMOQ99835 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.27□□□□□ -1.89
SMOQ99835 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SMOQ99835 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
SMOQ99835 MTND5P7-201ENST00000413558 1798 ntBASIC3.26□□□□□ -1.89
SMOQ99835 MTND5P9-201ENST00000503854 1755 ntBASIC3.26□□□□□ -1.89
SMOQ99835 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SMOQ99835 MIR422A-201ENST00000362286 90 ntBASIC3.26□□□□□ -1.89
SMOQ99835 RNU6-227P-201ENST00000362865 103 ntBASIC3.26□□□□□ -1.89
SMOQ99835 Y_RNA.80-201ENST00000362996 102 ntBASIC3.26□□□□□ -1.89
SMOQ99835 RNU6-527P-201ENST00000363425 104 ntBASIC3.26□□□□□ -1.89
SMOQ99835 RNU1-115P-201ENST00000365329 160 ntBASIC3.26□□□□□ -1.89
SMOQ99835 Y_RNA.485-201ENST00000384395 102 ntBASIC3.26□□□□□ -1.89
SMOQ99835 SNORD116-20-201ENST00000384529 92 ntBASIC3.26□□□□□ -1.89
SMOQ99835 Y_RNA.527-201ENST00000384573 102 ntBASIC3.26□□□□□ -1.89
SMOQ99835 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
SMOQ99835 Y_RNA.645-201ENST00000391229 102 ntBASIC3.26□□□□□ -1.89
SMOQ99835 AL356057.3-201ENST00000402607 340 ntBASIC3.26□□□□□ -1.89
SMOQ99835 FTH1P15-201ENST00000406984 280 ntBASIC3.26□□□□□ -1.89
SMOQ99835 RNU6-985P-201ENST00000410182 104 ntBASIC3.26□□□□□ -1.89
SMOQ99835 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.26□□□□□ -1.89
SMOQ99835 MTND3P2-201ENST00000438452 342 ntBASIC3.26□□□□□ -1.89
SMOQ99835 AC099799.1-201ENST00000439809 192 ntBASIC3.26□□□□□ -1.89
SMOQ99835 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.26□□□□□ -1.89
SMOQ99835 RPS12P18-201ENST00000442381 270 ntBASIC3.26□□□□□ -1.89
SMOQ99835 HMGN2P10-201ENST00000448085 265 ntBASIC3.26□□□□□ -1.89
SMOQ99835 AC125238.1-201ENST00000448842 249 ntBASIC3.26□□□□□ -1.89
SMOQ99835 CHEK2P4-201ENST00000450340 246 ntBASIC3.26□□□□□ -1.89
SMOQ99835 SSXP4-201ENST00000451349 245 ntBASIC3.26□□□□□ -1.89
SMOQ99835 AC079354.2-201ENST00000453523 154 ntBASIC3.26□□□□□ -1.89
SMOQ99835 AC006539.3-201ENST00000454258 129 ntBASIC3.26□□□□□ -1.89
SMOQ99835 AC128713.1-201ENST00000471495 306 ntBASIC3.26□□□□□ -1.89
SMOQ99835 RPL23AP49-201ENST00000492925 468 ntBASIC3.26□□□□□ -1.89
SMOQ99835 AC114801.2-201ENST00000503825 781 ntBASIC3.26□□□□□ -1.89
SMOQ99835 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.26□□□□□ -1.89
SMOQ99835 RNU4-77P-201ENST00000516692 156 ntBASIC3.26□□□□□ -1.89
SMOQ99835 AP000867.2-201ENST00000532468 320 ntBASIC3.26□□□□□ -1.89
SMOQ99835 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.26□□□□□ -1.89
SMOQ99835 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.26□□□□□ -1.89
SMOQ99835 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.26□□□□□ -1.89
SMOQ99835 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.26□□□□□ -1.89
SMOQ99835 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.26□□□□□ -1.89
SMOQ99835 AC009318.2-201ENST00000610917 651 ntBASIC3.26□□□□□ -1.89
SMOQ99835 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.26□□□□□ -1.89
SMOQ99835 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.26□□□□□ -1.89
SMOQ99835 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
SMOQ99835 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.26□□□□□ -1.89
SMOQ99835 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SMOQ99835 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.25□□□□□ -1.89
SMOQ99835 Y_RNA.314-201ENST00000365114 102 ntBASIC3.25□□□□□ -1.89
SMOQ99835 Y_RNA.577-201ENST00000384794 101 ntBASIC3.25□□□□□ -1.89
SMOQ99835 AL138885.1-201ENST00000405921 675 ntBASIC3.25□□□□□ -1.89
SMOQ99835 RNU6-1156P-201ENST00000410365 100 ntBASIC3.25□□□□□ -1.89
SMOQ99835 RN7SKP220-201ENST00000410611 288 ntBASIC3.25□□□□□ -1.89
SMOQ99835 RNA5SP38-201ENST00000410750 119 ntBASIC3.25□□□□□ -1.89
SMOQ99835 AL358176.2-201ENST00000425769 204 ntBASIC3.25□□□□□ -1.89
SMOQ99835 SNRPEP4-201ENST00000435815 279 ntBASIC3.25□□□□□ -1.89
SMOQ99835 HMGN2P20-201ENST00000437531 273 ntBASIC3.25□□□□□ -1.89
SMOQ99835 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.25□□□□□ -1.89
SMOQ99835 AC010099.1-201ENST00000455434 375 ntBASIC3.25□□□□□ -1.89
SMOQ99835 RPL27AP5-201ENST00000469428 449 ntBASIC3.25□□□□□ -1.89
SMOQ99835 RN7SL442P-201ENST00000473804 320 ntBASIC3.25□□□□□ -1.89
SMOQ99835 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.25□□□□□ -1.89
SMOQ99835 AC116655.1-201ENST00000508324 901 ntBASIC3.25□□□□□ -1.89
SMOQ99835 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.25□□□□□ -1.89
SMOQ99835 SNORA64.4-201ENST00000516632 81 ntBASIC3.25□□□□□ -1.89
SMOQ99835 AC010186.2-204ENST00000537668 439 ntBASIC3.25□□□□□ -1.89
SMOQ99835 NACAP3-201ENST00000552100 481 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms