Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 RNU6-908P-201ENST00000410160 94 ntBASIC2.09□□□□□ -2.07
RAB40CQ96S21 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.09□□□□□ -2.07
RAB40CQ96S21 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
RAB40CQ96S21 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.09□□□□□ -2.07
RAB40CQ96S21 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.09□□□□□ -2.07
RAB40CQ96S21 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.09□□□□□ -2.07
RAB40CQ96S21 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.09□□□□□ -2.07
RAB40CQ96S21 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
RAB40CQ96S21 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.09□□□□□ -2.07
RAB40CQ96S21 RPS3P1-201ENST00000456781 192 ntBASIC2.09□□□□□ -2.07
RAB40CQ96S21 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.09□□□□□ -2.07
RAB40CQ96S21 snoU13.14-201ENST00000459372 104 ntBASIC2.09□□□□□ -2.07
RAB40CQ96S21 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.09□□□□□ -2.07
RAB40CQ96S21 RPS29P26-201ENST00000477483 171 ntBASIC2.09□□□□□ -2.07
RAB40CQ96S21 RNU7-193P-201ENST00000516723 65 ntBASIC2.09□□□□□ -2.07
RAB40CQ96S21 ZNF519P2-201ENST00000557032 169 ntBASIC2.09□□□□□ -2.07
RAB40CQ96S21 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.09□□□□□ -2.07
RAB40CQ96S21 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.09□□□□□ -2.07
RAB40CQ96S21 TPRKBP2-201ENST00000565969 475 ntBASIC2.09□□□□□ -2.07
RAB40CQ96S21 AC091135.1-201ENST00000585943 307 ntBASIC2.09□□□□□ -2.07
RAB40CQ96S21 BNIP3P16-201ENST00000589779 534 ntBASIC2.09□□□□□ -2.07
RAB40CQ96S21 AL670379.2-201ENST00000604983 252 ntBASIC2.09□□□□□ -2.07
RAB40CQ96S21 AC005000.2-201ENST00000605468 310 ntBASIC2.09□□□□□ -2.07
RAB40CQ96S21 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.09□□□□□ -2.07
RAB40CQ96S21 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.09□□□□□ -2.07
RAB40CQ96S21 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
RAB40CQ96S21 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
RAB40CQ96S21 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.09□□□□□ -2.08
RAB40CQ96S21 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
RAB40CQ96S21 SNORA6-201ENST00000384033 151 ntBASIC2.08□□□□□ -2.08
RAB40CQ96S21 RNU6-1032P-201ENST00000384100 107 ntBASIC2.08□□□□□ -2.08
RAB40CQ96S21 RNU6-1222P-201ENST00000384615 107 ntBASIC2.08□□□□□ -2.08
RAB40CQ96S21 USP9YP20-201ENST00000419224 558 ntBASIC2.08□□□□□ -2.08
RAB40CQ96S21 MTCO1P20-201ENST00000425366 358 ntBASIC2.08□□□□□ -2.08
RAB40CQ96S21 AL139132.1-201ENST00000431587 344 ntBASIC2.08□□□□□ -2.08
RAB40CQ96S21 ERLEC1P1-201ENST00000433806 578 ntBASIC2.08□□□□□ -2.08
RAB40CQ96S21 MTND1P34-201ENST00000438556 671 ntBASIC2.08□□□□□ -2.08
RAB40CQ96S21 AC243964.1-201ENST00000441814 261 ntBASIC2.08□□□□□ -2.08
RAB40CQ96S21 USP9YP8-201ENST00000441913 500 ntBASIC2.08□□□□□ -2.08
RAB40CQ96S21 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.08□□□□□ -2.08
RAB40CQ96S21 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.08□□□□□ -2.08
RAB40CQ96S21 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.08□□□□□ -2.08
RAB40CQ96S21 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.08□□□□□ -2.08
RAB40CQ96S21 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.08□□□□□ -2.08
RAB40CQ96S21 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.08□□□□□ -2.08
RAB40CQ96S21 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.08□□□□□ -2.08
RAB40CQ96S21 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.08□□□□□ -2.08
RAB40CQ96S21 SNORA19.2-201ENST00000516013 114 ntBASIC2.08□□□□□ -2.08
RAB40CQ96S21 AC109635.3-201ENST00000529536 185 ntBASIC2.08□□□□□ -2.08
RAB40CQ96S21 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.08□□□□□ -2.08
RAB40CQ96S21 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.08□□□□□ -2.08
RAB40CQ96S21 MIR3126-201ENST00000577443 74 ntBASIC2.08□□□□□ -2.08
RAB40CQ96S21 MIR3200-201ENST00000580767 85 ntBASIC2.08□□□□□ -2.08
RAB40CQ96S21 AC010525.2-201ENST00000590920 195 ntBASIC2.08□□□□□ -2.08
RAB40CQ96S21 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.08□□□□□ -2.08
RAB40CQ96S21 AC135507.2-201ENST00000612443 309 ntBASIC2.08□□□□□ -2.08
RAB40CQ96S21 AL159153.1-201ENST00000619688 317 ntBASIC2.08□□□□□ -2.08
RAB40CQ96S21 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.08□□□□□ -2.08
RAB40CQ96S21 AC090517.3-201ENST00000625170 141 ntBASIC2.08□□□□□ -2.08
RAB40CQ96S21 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.08□□□□□ -2.08
RAB40CQ96S21 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
RAB40CQ96S21 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
RAB40CQ96S21 AC131280.1-202ENST00000624067 4211 ntBASIC2.07□□□□□ -2.08
RAB40CQ96S21 Y_RNA.9-201ENST00000362354 101 ntBASIC2.07□□□□□ -2.08
RAB40CQ96S21 Y_RNA.38-201ENST00000362617 102 ntBASIC2.07□□□□□ -2.08
RAB40CQ96S21 RNY3P3-201ENST00000363816 102 ntBASIC2.07□□□□□ -2.08
RAB40CQ96S21 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
RAB40CQ96S21 Y_RNA.402-201ENST00000383972 102 ntBASIC2.07□□□□□ -2.08
RAB40CQ96S21 RNU6-692P-201ENST00000384496 107 ntBASIC2.07□□□□□ -2.08
RAB40CQ96S21 Y_RNA.554-201ENST00000384672 102 ntBASIC2.07□□□□□ -2.08
RAB40CQ96S21 SNORD73A-201ENST00000386062 65 ntBASIC2.07□□□□□ -2.08
RAB40CQ96S21 RPS29P13-201ENST00000402041 169 ntBASIC2.07□□□□□ -2.08
RAB40CQ96S21 CBX3P9-201ENST00000402326 552 ntBASIC2.07□□□□□ -2.08
RAB40CQ96S21 AL162578.1-201ENST00000406202 378 ntBASIC2.07□□□□□ -2.08
RAB40CQ96S21 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.07□□□□□ -2.08
RAB40CQ96S21 AIMP1P2-201ENST00000425294 312 ntBASIC2.07□□□□□ -2.08
RAB40CQ96S21 C8orf59P1-201ENST00000429930 303 ntBASIC2.07□□□□□ -2.08
RAB40CQ96S21 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.07□□□□□ -2.08
RAB40CQ96S21 IPO7P1-201ENST00000442031 636 ntBASIC2.07□□□□□ -2.08
RAB40CQ96S21 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.07□□□□□ -2.08
RAB40CQ96S21 SNRPGP7-201ENST00000469016 106 ntBASIC2.07□□□□□ -2.08
RAB40CQ96S21 RNA5SP282-201ENST00000516355 108 ntBASIC2.07□□□□□ -2.08
RAB40CQ96S21 RNU6-1069P-201ENST00000516612 133 ntBASIC2.07□□□□□ -2.08
RAB40CQ96S21 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.07□□□□□ -2.08
RAB40CQ96S21 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.07□□□□□ -2.08
RAB40CQ96S21 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.07□□□□□ -2.08
RAB40CQ96S21 RNU6-323P-201ENST00000521915 107 ntBASIC2.07□□□□□ -2.08
RAB40CQ96S21 AC087241.2-201ENST00000535801 324 ntBASIC2.07□□□□□ -2.08
RAB40CQ96S21 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.07□□□□□ -2.08
RAB40CQ96S21 IMMP1LP2-201ENST00000552954 492 ntBASIC2.07□□□□□ -2.08
RAB40CQ96S21 AC078814.3-201ENST00000553036 491 ntBASIC2.07□□□□□ -2.08
RAB40CQ96S21 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.07□□□□□ -2.08
RAB40CQ96S21 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.07□□□□□ -2.08
RAB40CQ96S21 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.07□□□□□ -2.08
RAB40CQ96S21 AC078899.2-201ENST00000595282 212 ntBASIC2.07□□□□□ -2.08
RAB40CQ96S21 VN1R107P-201ENST00000601784 209 ntBASIC2.07□□□□□ -2.08
RAB40CQ96S21 RNU6-89P-201ENST00000606519 100 ntBASIC2.07□□□□□ -2.08
RAB40CQ96S21 AL357078.3-201ENST00000607528 618 ntBASIC2.07□□□□□ -2.08
RAB40CQ96S21 AL121757.2-201ENST00000611223 313 ntBASIC2.07□□□□□ -2.08
RAB40CQ96S21 AL137790.1-201ENST00000634283 177 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 157.5 ms