Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.3□□□□□ -1.72
SYNGAP1Q96PV0 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.3□□□□□ -1.72
SYNGAP1Q96PV0 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.3□□□□□ -1.72
SYNGAP1Q96PV0 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.3□□□□□ -1.72
SYNGAP1Q96PV0 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
SYNGAP1Q96PV0 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
SYNGAP1Q96PV0 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.29□□□□□ -1.72
SYNGAP1Q96PV0 RNU6-335P-201ENST00000364563 113 ntBASIC4.29□□□□□ -1.72
SYNGAP1Q96PV0 RNU6-21P-201ENST00000384710 107 ntBASIC4.29□□□□□ -1.72
SYNGAP1Q96PV0 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.29□□□□□ -1.72
SYNGAP1Q96PV0 TOMM22P1-201ENST00000418578 312 ntBASIC4.29□□□□□ -1.72
SYNGAP1Q96PV0 AC098614.2-201ENST00000426040 255 ntBASIC4.29□□□□□ -1.72
SYNGAP1Q96PV0 RPS15AP7-201ENST00000439294 405 ntBASIC4.29□□□□□ -1.72
SYNGAP1Q96PV0 HSPE1P25-201ENST00000455484 251 ntBASIC4.29□□□□□ -1.72
SYNGAP1Q96PV0 RNU7-120P-201ENST00000459334 63 ntBASIC4.29□□□□□ -1.72
SYNGAP1Q96PV0 RN7SL807P-201ENST00000470923 297 ntBASIC4.29□□□□□ -1.72
SYNGAP1Q96PV0 AC109925.1-201ENST00000478069 331 ntBASIC4.29□□□□□ -1.72
SYNGAP1Q96PV0 RPL31P13-201ENST00000484151 370 ntBASIC4.29□□□□□ -1.72
SYNGAP1Q96PV0 RPL23AP75-201ENST00000491601 451 ntBASIC4.29□□□□□ -1.72
SYNGAP1Q96PV0 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC4.29□□□□□ -1.72
SYNGAP1Q96PV0 RNU7-110P-201ENST00000516891 62 ntBASIC4.29□□□□□ -1.72
SYNGAP1Q96PV0 CBX3P4-201ENST00000538909 354 ntBASIC4.29□□□□□ -1.72
SYNGAP1Q96PV0 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.29□□□□□ -1.72
SYNGAP1Q96PV0 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.29□□□□□ -1.72
SYNGAP1Q96PV0 SCARNA4-202ENST00000625402 129 ntBASIC4.29□□□□□ -1.72
SYNGAP1Q96PV0 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.29□□□□□ -1.72
SYNGAP1Q96PV0 AC132825.6-201ENST00000638861 357 ntBASIC4.29□□□□□ -1.72
SYNGAP1Q96PV0 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
SYNGAP1Q96PV0 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
SYNGAP1Q96PV0 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
SYNGAP1Q96PV0 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SYNGAP1Q96PV0 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SYNGAP1Q96PV0 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SYNGAP1Q96PV0 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.28□□□□□ -1.72
SYNGAP1Q96PV0 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.28□□□□□ -1.72
SYNGAP1Q96PV0 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SYNGAP1Q96PV0 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SYNGAP1Q96PV0 RNU6-1159P-201ENST00000362933 107 ntBASIC4.28□□□□□ -1.72
SYNGAP1Q96PV0 RNU6-72P-201ENST00000384285 79 ntBASIC4.28□□□□□ -1.72
SYNGAP1Q96PV0 RNU6-125P-201ENST00000384505 107 ntBASIC4.28□□□□□ -1.72
SYNGAP1Q96PV0 RNU6-1245P-201ENST00000411130 106 ntBASIC4.28□□□□□ -1.72
SYNGAP1Q96PV0 Y_RNA.626-201ENST00000411288 95 ntBASIC4.28□□□□□ -1.72
SYNGAP1Q96PV0 NDUFB4P7-201ENST00000423198 363 ntBASIC4.28□□□□□ -1.72
SYNGAP1Q96PV0 AL356535.1-201ENST00000440335 398 ntBASIC4.28□□□□□ -1.72
SYNGAP1Q96PV0 SNORD105B-201ENST00000458770 79 ntBASIC4.28□□□□□ -1.72
SYNGAP1Q96PV0 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.28□□□□□ -1.72
SYNGAP1Q96PV0 AC022559.1-201ENST00000520905 205 ntBASIC4.28□□□□□ -1.72
SYNGAP1Q96PV0 AP006245.1-201ENST00000522549 120 ntBASIC4.28□□□□□ -1.72
SYNGAP1Q96PV0 EIF4BP1-201ENST00000554881 351 ntBASIC4.28□□□□□ -1.72
SYNGAP1Q96PV0 AL591424.2-201ENST00000617023 128 ntBASIC4.28□□□□□ -1.72
SYNGAP1Q96PV0 AC027309.3-201ENST00000623419 351 ntBASIC4.28□□□□□ -1.72
SYNGAP1Q96PV0 AC241585.2-209ENST00000638217 143 ntBASIC4.28□□□□□ -1.72
SYNGAP1Q96PV0 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SYNGAP1Q96PV0 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.28□□□□□ -1.72
SYNGAP1Q96PV0 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC4.28□□□□□ -1.72
SYNGAP1Q96PV0 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SYNGAP1Q96PV0 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SYNGAP1Q96PV0 AL139811.1-201ENST00000424779 2299 ntBASIC4.28□□□□□ -1.72
SYNGAP1Q96PV0 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SYNGAP1Q96PV0 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SYNGAP1Q96PV0 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.27□□□□□ -1.73
SYNGAP1Q96PV0 FTLP6-201ENST00000355274 422 ntBASIC4.27□□□□□ -1.73
SYNGAP1Q96PV0 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.27□□□□□ -1.73
SYNGAP1Q96PV0 AC074198.2-201ENST00000508153 258 ntBASIC4.27□□□□□ -1.73
SYNGAP1Q96PV0 VWA8P1-201ENST00000510889 176 ntBASIC4.27□□□□□ -1.73
SYNGAP1Q96PV0 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC4.27□□□□□ -1.73
SYNGAP1Q96PV0 RNU2-31P-201ENST00000516954 155 ntBASIC4.27□□□□□ -1.73
SYNGAP1Q96PV0 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.27□□□□□ -1.73
SYNGAP1Q96PV0 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC4.27□□□□□ -1.73
SYNGAP1Q96PV0 AC020895.1-201ENST00000595362 272 ntBASIC4.27□□□□□ -1.73
SYNGAP1Q96PV0 RNA5SP108-201ENST00000605921 117 ntBASIC4.27□□□□□ -1.73
SYNGAP1Q96PV0 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.27□□□□□ -1.73
SYNGAP1Q96PV0 MIR486-1-201ENST00000612171 68 ntBASIC4.27□□□□□ -1.73
SYNGAP1Q96PV0 AC090132.2-201ENST00000615881 347 ntBASIC4.27□□□□□ -1.73
SYNGAP1Q96PV0 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.27□□□□□ -1.73
SYNGAP1Q96PV0 MAPK10-373ENST00000641983 6772 ntBASIC4.27□□□□□ -1.73
SYNGAP1Q96PV0 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SYNGAP1Q96PV0 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SYNGAP1Q96PV0 IPO8P1-201ENST00000455509 3109 ntBASIC4.27□□□□□ -1.73
SYNGAP1Q96PV0 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
SYNGAP1Q96PV0 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.27□□□□□ -1.73
SYNGAP1Q96PV0 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SYNGAP1Q96PV0 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SYNGAP1Q96PV0 AC135776.4-201ENST00000624300 1904 ntBASIC4.26□□□□□ -1.73
SYNGAP1Q96PV0 RNU6-1020P-201ENST00000363684 107 ntBASIC4.26□□□□□ -1.73
SYNGAP1Q96PV0 RNU6-105P-201ENST00000363909 104 ntBASIC4.26□□□□□ -1.73
SYNGAP1Q96PV0 RNU6-740P-201ENST00000364734 105 ntBASIC4.26□□□□□ -1.73
SYNGAP1Q96PV0 U3.15-201ENST00000365398 212 ntBASIC4.26□□□□□ -1.73
SYNGAP1Q96PV0 RNU6-514P-201ENST00000384208 107 ntBASIC4.26□□□□□ -1.73
SYNGAP1Q96PV0 MIR325-201ENST00000385260 98 ntBASIC4.26□□□□□ -1.73
SYNGAP1Q96PV0 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SYNGAP1Q96PV0 Y_RNA.590-201ENST00000410140 107 ntBASIC4.26□□□□□ -1.73
SYNGAP1Q96PV0 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.26□□□□□ -1.73
SYNGAP1Q96PV0 OOSP1P1-201ENST00000423265 274 ntBASIC4.26□□□□□ -1.73
SYNGAP1Q96PV0 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SYNGAP1Q96PV0 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.26□□□□□ -1.73
SYNGAP1Q96PV0 CYCSP35-201ENST00000451978 304 ntBASIC4.26□□□□□ -1.73
SYNGAP1Q96PV0 RAC1P2-201ENST00000511164 579 ntBASIC4.26□□□□□ -1.73
SYNGAP1Q96PV0 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC4.26□□□□□ -1.73
SYNGAP1Q96PV0 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 274 ms