Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.52□□□□□ -2.01
CMTM3Q96MX0 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.52□□□□□ -2.01
CMTM3Q96MX0 RNU5F-2P-201ENST00000516066 82 ntBASIC2.52□□□□□ -2.01
CMTM3Q96MX0 RNU6-1314P-201ENST00000517139 104 ntBASIC2.52□□□□□ -2.01
CMTM3Q96MX0 RNU6-586P-201ENST00000517265 104 ntBASIC2.52□□□□□ -2.01
CMTM3Q96MX0 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.52□□□□□ -2.01
CMTM3Q96MX0 SCOCP1-201ENST00000554676 349 ntBASIC2.52□□□□□ -2.01
CMTM3Q96MX0 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.52□□□□□ -2.01
CMTM3Q96MX0 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.52□□□□□ -2.01
CMTM3Q96MX0 AL670379.2-201ENST00000604983 252 ntBASIC2.52□□□□□ -2.01
CMTM3Q96MX0 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CMTM3Q96MX0 U4atac.1-201ENST00000618345 95 ntBASIC2.52□□□□□ -2.01
CMTM3Q96MX0 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
CMTM3Q96MX0 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
CMTM3Q96MX0 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
CMTM3Q96MX0 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.51□□□□□ -2.01
CMTM3Q96MX0 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
CMTM3Q96MX0 RNU1-52P-201ENST00000384190 164 ntBASIC2.51□□□□□ -2.01
CMTM3Q96MX0 SNORD67-201ENST00000390833 111 ntBASIC2.51□□□□□ -2.01
CMTM3Q96MX0 RN7SKP61-201ENST00000410642 295 ntBASIC2.51□□□□□ -2.01
CMTM3Q96MX0 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.51□□□□□ -2.01
CMTM3Q96MX0 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.51□□□□□ -2.01
CMTM3Q96MX0 AC244670.1-201ENST00000436879 112 ntBASIC2.51□□□□□ -2.01
CMTM3Q96MX0 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.51□□□□□ -2.01
CMTM3Q96MX0 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.51□□□□□ -2.01
CMTM3Q96MX0 AMD1P1-201ENST00000457220 922 ntBASIC2.51□□□□□ -2.01
CMTM3Q96MX0 U8.21-201ENST00000459536 136 ntBASIC2.51□□□□□ -2.01
CMTM3Q96MX0 AC090525.1-201ENST00000479116 478 ntBASIC2.51□□□□□ -2.01
CMTM3Q96MX0 RN7SL293P-201ENST00000481765 281 ntBASIC2.51□□□□□ -2.01
CMTM3Q96MX0 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.51□□□□□ -2.01
CMTM3Q96MX0 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.51□□□□□ -2.01
CMTM3Q96MX0 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.51□□□□□ -2.01
CMTM3Q96MX0 SNORA67.7-201ENST00000516664 135 ntBASIC2.51□□□□□ -2.01
CMTM3Q96MX0 RNU6-256P-201ENST00000516747 97 ntBASIC2.51□□□□□ -2.01
CMTM3Q96MX0 RNU6-612P-201ENST00000516909 102 ntBASIC2.51□□□□□ -2.01
CMTM3Q96MX0 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.51□□□□□ -2.01
CMTM3Q96MX0 AF235103.2-201ENST00000525753 346 ntBASIC2.51□□□□□ -2.01
CMTM3Q96MX0 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.51□□□□□ -2.01
CMTM3Q96MX0 AL160281.1-201ENST00000605307 311 ntBASIC2.51□□□□□ -2.01
CMTM3Q96MX0 AC018692.3-201ENST00000623929 123 ntBASIC2.51□□□□□ -2.01
CMTM3Q96MX0 AL160394.1-201ENST00000624765 724 ntBASIC2.51□□□□□ -2.01
CMTM3Q96MX0 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.51□□□□□ -2.01
CMTM3Q96MX0 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.51□□□□□ -2.01
CMTM3Q96MX0 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
CMTM3Q96MX0 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CMTM3Q96MX0 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CMTM3Q96MX0 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CMTM3Q96MX0 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.5□□□□□ -2.01
CMTM3Q96MX0 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.5□□□□□ -2.01
CMTM3Q96MX0 MIR22-201ENST00000362190 85 ntBASIC2.5□□□□□ -2.01
CMTM3Q96MX0 MIR26A1-201ENST00000362205 77 ntBASIC2.5□□□□□ -2.01
CMTM3Q96MX0 SNORA9.2-201ENST00000365361 133 ntBASIC2.5□□□□□ -2.01
CMTM3Q96MX0 SNORA48.7-201ENST00000391302 135 ntBASIC2.5□□□□□ -2.01
CMTM3Q96MX0 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.5□□□□□ -2.01
CMTM3Q96MX0 AL133396.1-201ENST00000432048 687 ntBASIC2.5□□□□□ -2.01
CMTM3Q96MX0 AL645568.3-201ENST00000433683 316 ntBASIC2.5□□□□□ -2.01
CMTM3Q96MX0 MTCO3P18-201ENST00000440206 761 ntBASIC2.5□□□□□ -2.01
CMTM3Q96MX0 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.5□□□□□ -2.01
CMTM3Q96MX0 AL139109.1-201ENST00000455491 297 ntBASIC2.5□□□□□ -2.01
CMTM3Q96MX0 RPS3P1-201ENST00000456781 192 ntBASIC2.5□□□□□ -2.01
CMTM3Q96MX0 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.5□□□□□ -2.01
CMTM3Q96MX0 HMGB1P35-201ENST00000503360 598 ntBASIC2.5□□□□□ -2.01
CMTM3Q96MX0 RPL39P5-202ENST00000512505 151 ntBASIC2.5□□□□□ -2.01
CMTM3Q96MX0 AC025465.4-201ENST00000513422 638 ntBASIC2.5□□□□□ -2.01
CMTM3Q96MX0 RN7SKP272-201ENST00000516988 232 ntBASIC2.5□□□□□ -2.01
CMTM3Q96MX0 SNORA48.11-201ENST00000517015 89 ntBASIC2.5□□□□□ -2.01
CMTM3Q96MX0 HSPE1P4-201ENST00000550617 308 ntBASIC2.5□□□□□ -2.01
CMTM3Q96MX0 MIR3136-201ENST00000583498 78 ntBASIC2.5□□□□□ -2.01
CMTM3Q96MX0 MIR3672-201ENST00000584290 82 ntBASIC2.5□□□□□ -2.01
CMTM3Q96MX0 AL162274.2-201ENST00000614406 332 ntBASIC2.5□□□□□ -2.01
CMTM3Q96MX0 AL138726.1-201ENST00000614873 333 ntBASIC2.5□□□□□ -2.01
CMTM3Q96MX0 AC009033.1-201ENST00000624279 431 ntBASIC2.5□□□□□ -2.01
CMTM3Q96MX0 AC090517.3-201ENST00000625170 141 ntBASIC2.5□□□□□ -2.01
CMTM3Q96MX0 ZNF271P-202ENST00000465539 1970 ntBASIC2.5□□□□□ -2.01
CMTM3Q96MX0 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.5□□□□□ -2.01
CMTM3Q96MX0 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.49□□□□□ -2.01
CMTM3Q96MX0 snoU2_19.1-201ENST00000362361 80 ntBASIC2.49□□□□□ -2.01
CMTM3Q96MX0 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CMTM3Q96MX0 MIR561-201ENST00000385216 97 ntBASIC2.49□□□□□ -2.01
CMTM3Q96MX0 MIR670-201ENST00000390142 98 ntBASIC2.49□□□□□ -2.01
CMTM3Q96MX0 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
CMTM3Q96MX0 UBA52P6-201ENST00000399822 382 ntBASIC2.49□□□□□ -2.01
CMTM3Q96MX0 AL030996.1-201ENST00000411430 235 ntBASIC2.49□□□□□ -2.01
CMTM3Q96MX0 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CMTM3Q96MX0 RPL32P28-201ENST00000443577 397 ntBASIC2.49□□□□□ -2.01
CMTM3Q96MX0 RN7SL863P-201ENST00000462370 296 ntBASIC2.49□□□□□ -2.01
CMTM3Q96MX0 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.49□□□□□ -2.01
CMTM3Q96MX0 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.49□□□□□ -2.01
CMTM3Q96MX0 AC069439.1-201ENST00000494739 167 ntBASIC2.49□□□□□ -2.01
CMTM3Q96MX0 AC096745.1-201ENST00000509945 370 ntBASIC2.49□□□□□ -2.01
CMTM3Q96MX0 RNU6-358P-201ENST00000516564 75 ntBASIC2.49□□□□□ -2.01
CMTM3Q96MX0 RN7SKP256-201ENST00000517201 314 ntBASIC2.49□□□□□ -2.01
CMTM3Q96MX0 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.49□□□□□ -2.01
CMTM3Q96MX0 AC121758.2-201ENST00000553271 193 ntBASIC2.49□□□□□ -2.01
CMTM3Q96MX0 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.49□□□□□ -2.01
CMTM3Q96MX0 MIR1254-2-201ENST00000579553 63 ntBASIC2.49□□□□□ -2.01
CMTM3Q96MX0 MIR3922-201ENST00000585192 84 ntBASIC2.49□□□□□ -2.01
CMTM3Q96MX0 AC060766.3-201ENST00000591442 263 ntBASIC2.49□□□□□ -2.01
CMTM3Q96MX0 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.49□□□□□ -2.01
CMTM3Q96MX0 AC012314.7-201ENST00000619693 93 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms