Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 MIR659-201ENST00000384963 97 ntBASIC4.56□□□□□ -1.68
CALR3Q96L12 MIR186-201ENST00000384988 86 ntBASIC4.56□□□□□ -1.68
CALR3Q96L12 MIR1178-201ENST00000408396 91 ntBASIC4.56□□□□□ -1.68
CALR3Q96L12 BX510359.3-201ENST00000422168 306 ntBASIC4.56□□□□□ -1.68
CALR3Q96L12 POLR2KP2-201ENST00000438155 177 ntBASIC4.56□□□□□ -1.68
CALR3Q96L12 SUMO1P3-201ENST00000439961 304 ntBASIC4.56□□□□□ -1.68
CALR3Q96L12 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.56□□□□□ -1.68
CALR3Q96L12 SUMO1P2-201ENST00000452524 304 ntBASIC4.56□□□□□ -1.68
CALR3Q96L12 AC105137.1-201ENST00000484355 562 ntBASIC4.56□□□□□ -1.68
CALR3Q96L12 RPS26P15-201ENST00000488067 348 ntBASIC4.56□□□□□ -1.68
CALR3Q96L12 RN7SL808P-201ENST00000496066 299 ntBASIC4.56□□□□□ -1.68
CALR3Q96L12 AP001781.1-201ENST00000530977 207 ntBASIC4.56□□□□□ -1.68
CALR3Q96L12 AL162424.1-201ENST00000602325 221 ntBASIC4.56□□□□□ -1.68
CALR3Q96L12 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
CALR3Q96L12 AL590240.4-201ENST00000616908 390 ntBASIC4.56□□□□□ -1.68
CALR3Q96L12 uc_338.13-201ENST00000618243 179 ntBASIC4.56□□□□□ -1.68
CALR3Q96L12 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC4.56□□□□□ -1.68
CALR3Q96L12 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CALR3Q96L12 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CALR3Q96L12 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CALR3Q96L12 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC4.55□□□□□ -1.68
CALR3Q96L12 AC018555.1-201ENST00000567548 1980 ntBASIC4.55□□□□□ -1.68
CALR3Q96L12 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
CALR3Q96L12 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CALR3Q96L12 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
CALR3Q96L12 RNU6-655P-201ENST00000362858 107 ntBASIC4.55□□□□□ -1.68
CALR3Q96L12 RNU1-105P-201ENST00000363470 161 ntBASIC4.55□□□□□ -1.68
CALR3Q96L12 RNU6-1210P-201ENST00000363775 107 ntBASIC4.55□□□□□ -1.68
CALR3Q96L12 Y_RNA.199-201ENST00000364014 102 ntBASIC4.55□□□□□ -1.68
CALR3Q96L12 RNU6-1062P-201ENST00000383908 107 ntBASIC4.55□□□□□ -1.68
CALR3Q96L12 Y_RNA.446-201ENST00000384178 104 ntBASIC4.55□□□□□ -1.68
CALR3Q96L12 MIR105-2-201ENST00000385083 81 ntBASIC4.55□□□□□ -1.68
CALR3Q96L12 IFNA11P-201ENST00000446352 526 ntBASIC4.55□□□□□ -1.68
CALR3Q96L12 AC005042.3-201ENST00000453230 174 ntBASIC4.55□□□□□ -1.68
CALR3Q96L12 AC112771.1-201ENST00000463581 102 ntBASIC4.55□□□□□ -1.68
CALR3Q96L12 RPL35AP15-201ENST00000468042 339 ntBASIC4.55□□□□□ -1.68
CALR3Q96L12 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC4.55□□□□□ -1.68
CALR3Q96L12 AC026470.2-201ENST00000561492 181 ntBASIC4.55□□□□□ -1.68
CALR3Q96L12 AL365434.2-201ENST00000607979 234 ntBASIC4.55□□□□□ -1.68
CALR3Q96L12 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.55□□□□□ -1.68
CALR3Q96L12 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC4.55□□□□□ -1.68
CALR3Q96L12 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
CALR3Q96L12 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
CALR3Q96L12 AC135776.4-201ENST00000624300 1904 ntBASIC4.54□□□□□ -1.68
CALR3Q96L12 TNPO1P3-201ENST00000436471 2662 ntBASIC4.54□□□□□ -1.68
CALR3Q96L12 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
CALR3Q96L12 RNU4-15P-201ENST00000362613 141 ntBASIC4.54□□□□□ -1.68
CALR3Q96L12 Y_RNA.76-201ENST00000362931 109 ntBASIC4.54□□□□□ -1.68
CALR3Q96L12 Y_RNA.136-201ENST00000363444 102 ntBASIC4.54□□□□□ -1.68
CALR3Q96L12 RNU6-740P-201ENST00000364734 105 ntBASIC4.54□□□□□ -1.68
CALR3Q96L12 RNU1-57P-201ENST00000384491 166 ntBASIC4.54□□□□□ -1.68
CALR3Q96L12 MIR767-201ENST00000390228 109 ntBASIC4.54□□□□□ -1.68
CALR3Q96L12 AL121594.1-201ENST00000475906 575 ntBASIC4.54□□□□□ -1.68
CALR3Q96L12 RPL23AP70-201ENST00000483361 460 ntBASIC4.54□□□□□ -1.68
CALR3Q96L12 RPL36AP48-201ENST00000485521 314 ntBASIC4.54□□□□□ -1.68
CALR3Q96L12 AC025554.1-201ENST00000505641 188 ntBASIC4.54□□□□□ -1.68
CALR3Q96L12 RNU6ATAC13P-201ENST00000516152 131 ntBASIC4.54□□□□□ -1.68
CALR3Q96L12 EIF4A1P12-201ENST00000551910 141 ntBASIC4.54□□□□□ -1.68
CALR3Q96L12 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC4.54□□□□□ -1.68
CALR3Q96L12 MIR4474-201ENST00000579189 78 ntBASIC4.54□□□□□ -1.68
CALR3Q96L12 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC4.54□□□□□ -1.68
CALR3Q96L12 FTX_2.1-201ENST00000618816 94 ntBASIC4.54□□□□□ -1.68
CALR3Q96L12 AC018445.2-201ENST00000622987 260 ntBASIC4.54□□□□□ -1.68
CALR3Q96L12 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.54□□□□□ -1.68
CALR3Q96L12 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.54□□□□□ -1.68
CALR3Q96L12 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CALR3Q96L12 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CALR3Q96L12 RAD17P1-201ENST00000418130 2042 ntBASIC4.53□□□□□ -1.68
CALR3Q96L12 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.53□□□□□ -1.68
CALR3Q96L12 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CALR3Q96L12 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.53□□□□□ -1.68
CALR3Q96L12 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CALR3Q96L12 U3.9-201ENST00000363823 204 ntBASIC4.53□□□□□ -1.68
CALR3Q96L12 Y_RNA.383-201ENST00000383855 97 ntBASIC4.53□□□□□ -1.68
CALR3Q96L12 RNU6-1310P-201ENST00000384153 107 ntBASIC4.53□□□□□ -1.68
CALR3Q96L12 SNORA46.1-201ENST00000391069 153 ntBASIC4.53□□□□□ -1.68
CALR3Q96L12 RNA5SP306-201ENST00000411087 107 ntBASIC4.53□□□□□ -1.68
CALR3Q96L12 ELOCP21-201ENST00000412558 336 ntBASIC4.53□□□□□ -1.68
CALR3Q96L12 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.53□□□□□ -1.68
CALR3Q96L12 AL159169.1-201ENST00000421119 127 ntBASIC4.53□□□□□ -1.68
CALR3Q96L12 RAB28P5-201ENST00000427490 651 ntBASIC4.53□□□□□ -1.68
CALR3Q96L12 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.53□□□□□ -1.68
CALR3Q96L12 NDUFB4P10-201ENST00000452541 359 ntBASIC4.53□□□□□ -1.68
CALR3Q96L12 RPL23AP3-201ENST00000453844 468 ntBASIC4.53□□□□□ -1.68
CALR3Q96L12 RPS3P1-201ENST00000456781 192 ntBASIC4.53□□□□□ -1.68
CALR3Q96L12 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.53□□□□□ -1.68
CALR3Q96L12 AC079598.5-201ENST00000547460 117 ntBASIC4.53□□□□□ -1.68
CALR3Q96L12 AC027176.1-201ENST00000560204 514 ntBASIC4.53□□□□□ -1.68
CALR3Q96L12 AC055872.1-201ENST00000570978 278 ntBASIC4.53□□□□□ -1.68
CALR3Q96L12 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.53□□□□□ -1.68
CALR3Q96L12 AC012603.1-201ENST00000606424 528 ntBASIC4.53□□□□□ -1.68
CALR3Q96L12 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC4.53□□□□□ -1.68
CALR3Q96L12 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CALR3Q96L12 AC007256.1-201ENST00000392253 2765 ntBASIC4.52□□□□□ -1.69
CALR3Q96L12 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CALR3Q96L12 RNU6-727P-201ENST00000363592 107 ntBASIC4.52□□□□□ -1.69
CALR3Q96L12 Y_RNA.275-201ENST00000364726 110 ntBASIC4.52□□□□□ -1.69
CALR3Q96L12 RPL19P1-201ENST00000411635 428 ntBASIC4.52□□□□□ -1.69
CALR3Q96L12 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC4.52□□□□□ -1.69
CALR3Q96L12 HMGN2P20-201ENST00000437531 273 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms