Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 snoU13.14-201ENST00000459372 104 ntBASIC1.69□□□□□ -2.14
PKNOX2Q96KN3 AL121594.1-201ENST00000475906 575 ntBASIC1.69□□□□□ -2.14
PKNOX2Q96KN3 RNU6-685P-201ENST00000517088 95 ntBASIC1.69□□□□□ -2.14
PKNOX2Q96KN3 RNU6-1220P-201ENST00000517126 108 ntBASIC1.69□□□□□ -2.14
PKNOX2Q96KN3 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.69□□□□□ -2.14
PKNOX2Q96KN3 BNIP3P6-201ENST00000549284 499 ntBASIC1.69□□□□□ -2.14
PKNOX2Q96KN3 MTND1P24-201ENST00000552175 861 ntBASIC1.69□□□□□ -2.14
PKNOX2Q96KN3 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.69□□□□□ -2.14
PKNOX2Q96KN3 AC110588.1-201ENST00000559699 137 ntBASIC1.69□□□□□ -2.14
PKNOX2Q96KN3 AC005771.1-201ENST00000585581 349 ntBASIC1.69□□□□□ -2.14
PKNOX2Q96KN3 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.69□□□□□ -2.14
PKNOX2Q96KN3 AC012065.4-201ENST00000602445 679 ntBASIC1.69□□□□□ -2.14
PKNOX2Q96KN3 AC092354.1-201ENST00000606057 376 ntBASIC1.69□□□□□ -2.14
PKNOX2Q96KN3 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.69□□□□□ -2.14
PKNOX2Q96KN3 AC019226.2-201ENST00000625973 424 ntBASIC1.69□□□□□ -2.14
PKNOX2Q96KN3 FARSBP1-201ENST00000435808 1778 ntBASIC1.68□□□□□ -2.14
PKNOX2Q96KN3 Y_RNA.40-201ENST00000362645 93 ntBASIC1.68□□□□□ -2.14
PKNOX2Q96KN3 RNU6-179P-201ENST00000363350 107 ntBASIC1.68□□□□□ -2.14
PKNOX2Q96KN3 RNU6-169P-201ENST00000365336 107 ntBASIC1.68□□□□□ -2.14
PKNOX2Q96KN3 CBX3P9-201ENST00000402326 552 ntBASIC1.68□□□□□ -2.14
PKNOX2Q96KN3 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.68□□□□□ -2.14
PKNOX2Q96KN3 RNU2-48P-201ENST00000410694 191 ntBASIC1.68□□□□□ -2.14
PKNOX2Q96KN3 SRIP3-201ENST00000413200 219 ntBASIC1.68□□□□□ -2.14
PKNOX2Q96KN3 RPL21P90-201ENST00000415692 466 ntBASIC1.68□□□□□ -2.14
PKNOX2Q96KN3 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.68□□□□□ -2.14
PKNOX2Q96KN3 MTATP6P16-201ENST00000434543 526 ntBASIC1.68□□□□□ -2.14
PKNOX2Q96KN3 AC104850.1-201ENST00000435940 476 ntBASIC1.68□□□□□ -2.14
PKNOX2Q96KN3 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.68□□□□□ -2.14
PKNOX2Q96KN3 AC008549.1-201ENST00000512900 643 ntBASIC1.68□□□□□ -2.14
PKNOX2Q96KN3 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.68□□□□□ -2.14
PKNOX2Q96KN3 RNU1-86P-201ENST00000516108 154 ntBASIC1.68□□□□□ -2.14
PKNOX2Q96KN3 SCARNA24.1-201ENST00000516465 137 ntBASIC1.68□□□□□ -2.14
PKNOX2Q96KN3 RNU1-107P-201ENST00000516617 154 ntBASIC1.68□□□□□ -2.14
PKNOX2Q96KN3 AC106038.2-201ENST00000520706 568 ntBASIC1.68□□□□□ -2.14
PKNOX2Q96KN3 MIR5692A1-201ENST00000580523 69 ntBASIC1.68□□□□□ -2.14
PKNOX2Q96KN3 MIR4513-201ENST00000581077 86 ntBASIC1.68□□□□□ -2.14
PKNOX2Q96KN3 AL121992.2-201ENST00000606262 256 ntBASIC1.68□□□□□ -2.14
PKNOX2Q96KN3 AC009159.2-201ENST00000617603 606 ntBASIC1.68□□□□□ -2.14
PKNOX2Q96KN3 RMST_7.1-201ENST00000621935 268 ntBASIC1.68□□□□□ -2.14
PKNOX2Q96KN3 AC079248.2-201ENST00000623779 326 ntBASIC1.68□□□□□ -2.14
PKNOX2Q96KN3 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.68□□□□□ -2.14
PKNOX2Q96KN3 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.68□□□□□ -2.14
PKNOX2Q96KN3 RNU6-1210P-201ENST00000363775 107 ntBASIC1.67□□□□□ -2.14
PKNOX2Q96KN3 RNU6-1274P-201ENST00000384557 107 ntBASIC1.67□□□□□ -2.14
PKNOX2Q96KN3 Y_RNA.560-201ENST00000384689 102 ntBASIC1.67□□□□□ -2.14
PKNOX2Q96KN3 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
PKNOX2Q96KN3 SNORA48.1-201ENST00000390879 135 ntBASIC1.67□□□□□ -2.14
PKNOX2Q96KN3 RAP1BP3-201ENST00000407180 549 ntBASIC1.67□□□□□ -2.14
PKNOX2Q96KN3 MTND4P20-201ENST00000424125 869 ntBASIC1.67□□□□□ -2.14
PKNOX2Q96KN3 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC1.67□□□□□ -2.14
PKNOX2Q96KN3 MTND1P30-201ENST00000441241 901 ntBASIC1.67□□□□□ -2.14
PKNOX2Q96KN3 SNRPFP4-201ENST00000456366 242 ntBASIC1.67□□□□□ -2.14
PKNOX2Q96KN3 AC116562.3-201ENST00000506136 177 ntBASIC1.67□□□□□ -2.14
PKNOX2Q96KN3 MTND1P22-201ENST00000510572 951 ntBASIC1.67□□□□□ -2.14
PKNOX2Q96KN3 RNA5SP61-201ENST00000516453 100 ntBASIC1.67□□□□□ -2.14
PKNOX2Q96KN3 AC068587.5-201ENST00000528506 175 ntBASIC1.67□□□□□ -2.14
PKNOX2Q96KN3 AP000889.1-201ENST00000530968 660 ntBASIC1.67□□□□□ -2.14
PKNOX2Q96KN3 AP000763.2-201ENST00000540641 163 ntBASIC1.67□□□□□ -2.14
PKNOX2Q96KN3 ZNF321P-202ENST00000550843 495 ntBASIC1.67□□□□□ -2.14
PKNOX2Q96KN3 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.67□□□□□ -2.14
PKNOX2Q96KN3 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.67□□□□□ -2.14
PKNOX2Q96KN3 MIR548AB-201ENST00000584917 84 ntBASIC1.67□□□□□ -2.14
PKNOX2Q96KN3 CLIC4P2-201ENST00000601934 717 ntBASIC1.67□□□□□ -2.14
PKNOX2Q96KN3 AC012360.2-201ENST00000609349 391 ntBASIC1.67□□□□□ -2.14
PKNOX2Q96KN3 AL133173.2-201ENST00000614270 90 ntBASIC1.67□□□□□ -2.14
PKNOX2Q96KN3 RMST_4.1-201ENST00000616886 107 ntBASIC1.67□□□□□ -2.14
PKNOX2Q96KN3 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.67□□□□□ -2.14
PKNOX2Q96KN3 AC138649.3-201ENST00000622154 254 ntBASIC1.67□□□□□ -2.14
PKNOX2Q96KN3 AC093648.1-201ENST00000623546 606 ntBASIC1.67□□□□□ -2.14
PKNOX2Q96KN3 AL359740.1-201ENST00000624340 592 ntBASIC1.67□□□□□ -2.14
PKNOX2Q96KN3 AC090517.3-201ENST00000625170 141 ntBASIC1.67□□□□□ -2.14
PKNOX2Q96KN3 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
PKNOX2Q96KN3 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
PKNOX2Q96KN3 AL031577.2-201ENST00000404133 280 ntBASIC1.66□□□□□ -2.14
PKNOX2Q96KN3 RNU2-32P-201ENST00000411193 191 ntBASIC1.66□□□□□ -2.14
PKNOX2Q96KN3 CALM2P2-201ENST00000428512 440 ntBASIC1.66□□□□□ -2.14
PKNOX2Q96KN3 MTND5P25-201ENST00000430499 799 ntBASIC1.66□□□□□ -2.14
PKNOX2Q96KN3 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.66□□□□□ -2.14
PKNOX2Q96KN3 HMGB1P31-201ENST00000437242 427 ntBASIC1.66□□□□□ -2.14
PKNOX2Q96KN3 RPL7P54-201ENST00000438336 674 ntBASIC1.66□□□□□ -2.14
PKNOX2Q96KN3 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.66□□□□□ -2.14
PKNOX2Q96KN3 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.66□□□□□ -2.14
PKNOX2Q96KN3 AC104058.1-201ENST00000448028 297 ntBASIC1.66□□□□□ -2.14
PKNOX2Q96KN3 RNU7-125P-201ENST00000458760 62 ntBASIC1.66□□□□□ -2.14
PKNOX2Q96KN3 Vault.3-201ENST00000516676 95 ntBASIC1.66□□□□□ -2.14
PKNOX2Q96KN3 RNU6-232P-201ENST00000517144 64 ntBASIC1.66□□□□□ -2.14
PKNOX2Q96KN3 RN7SKP256-201ENST00000517201 314 ntBASIC1.66□□□□□ -2.14
PKNOX2Q96KN3 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.66□□□□□ -2.14
PKNOX2Q96KN3 AP003392.2-201ENST00000527269 208 ntBASIC1.66□□□□□ -2.14
PKNOX2Q96KN3 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.66□□□□□ -2.14
PKNOX2Q96KN3 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
PKNOX2Q96KN3 AC008015.1-201ENST00000555505 465 ntBASIC1.66□□□□□ -2.14
PKNOX2Q96KN3 BNIP3P8-201ENST00000597863 560 ntBASIC1.66□□□□□ -2.14
PKNOX2Q96KN3 AC026585.1-201ENST00000619582 524 ntBASIC1.66□□□□□ -2.14
PKNOX2Q96KN3 AC007792.1-201ENST00000623023 402 ntBASIC1.66□□□□□ -2.14
PKNOX2Q96KN3 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
PKNOX2Q96KN3 AC002543.1-201ENST00000299783 1954 ntBASIC1.65□□□□□ -2.14
PKNOX2Q96KN3 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
PKNOX2Q96KN3 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
PKNOX2Q96KN3 SNORD33-201ENST00000362761 85 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms