Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 IMMP1LP2-201ENST00000552954 492 ntBASIC1.76□□□□□ -2.13
USP47Q96K76 AL359999.1-201ENST00000604513 294 ntBASIC1.76□□□□□ -2.13
USP47Q96K76 AC022709.1-201ENST00000615967 87 ntBASIC1.76□□□□□ -2.13
USP47Q96K76 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.76□□□□□ -2.13
USP47Q96K76 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
USP47Q96K76 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
USP47Q96K76 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
USP47Q96K76 RNU4-28P-201ENST00000364739 141 ntBASIC1.75□□□□□ -2.13
USP47Q96K76 SNORD116-20-201ENST00000384529 92 ntBASIC1.75□□□□□ -2.13
USP47Q96K76 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.75□□□□□ -2.13
USP47Q96K76 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.75□□□□□ -2.13
USP47Q96K76 CALM1P1-201ENST00000442082 433 ntBASIC1.75□□□□□ -2.13
USP47Q96K76 MTND6P13-201ENST00000443510 523 ntBASIC1.75□□□□□ -2.13
USP47Q96K76 NDUFB1P2-201ENST00000449477 176 ntBASIC1.75□□□□□ -2.13
USP47Q96K76 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.75□□□□□ -2.13
USP47Q96K76 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.75□□□□□ -2.13
USP47Q96K76 RNU6-667P-201ENST00000517186 102 ntBASIC1.75□□□□□ -2.13
USP47Q96K76 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.75□□□□□ -2.13
USP47Q96K76 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.75□□□□□ -2.13
USP47Q96K76 AC008751.2-201ENST00000597885 980 ntBASIC1.75□□□□□ -2.13
USP47Q96K76 AL138889.2-201ENST00000603883 242 ntBASIC1.75□□□□□ -2.13
USP47Q96K76 AC080078.3-201ENST00000605407 463 ntBASIC1.75□□□□□ -2.13
USP47Q96K76 AL627230.6-201ENST00000611129 280 ntBASIC1.75□□□□□ -2.13
USP47Q96K76 AC090517.3-201ENST00000625170 141 ntBASIC1.75□□□□□ -2.13
USP47Q96K76 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
USP47Q96K76 RNA5SP450-201ENST00000411206 102 ntBASIC1.74□□□□□ -2.13
USP47Q96K76 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC1.74□□□□□ -2.13
USP47Q96K76 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.74□□□□□ -2.13
USP47Q96K76 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.74□□□□□ -2.13
USP47Q96K76 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.74□□□□□ -2.13
USP47Q96K76 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.74□□□□□ -2.13
USP47Q96K76 RPS29P23-201ENST00000458635 123 ntBASIC1.74□□□□□ -2.13
USP47Q96K76 AC006512.1-201ENST00000468816 291 ntBASIC1.74□□□□□ -2.13
USP47Q96K76 AP001025.1-201ENST00000486139 332 ntBASIC1.74□□□□□ -2.13
USP47Q96K76 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
USP47Q96K76 MRPS36P3-201ENST00000519284 130 ntBASIC1.74□□□□□ -2.13
USP47Q96K76 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.74□□□□□ -2.13
USP47Q96K76 CYCSP27-201ENST00000527643 293 ntBASIC1.74□□□□□ -2.13
USP47Q96K76 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.74□□□□□ -2.13
USP47Q96K76 MIR548AC-201ENST00000585049 88 ntBASIC1.74□□□□□ -2.13
USP47Q96K76 SNRPGP17-201ENST00000603780 214 ntBASIC1.74□□□□□ -2.13
USP47Q96K76 AL139286.2-201ENST00000606838 396 ntBASIC1.74□□□□□ -2.13
USP47Q96K76 AC012409.4-201ENST00000612923 249 ntBASIC1.74□□□□□ -2.13
USP47Q96K76 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.74□□□□□ -2.13
USP47Q96K76 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
USP47Q96K76 AC009878.1-201ENST00000621819 340 ntBASIC1.74□□□□□ -2.13
USP47Q96K76 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.74□□□□□ -2.13
USP47Q96K76 RNU6-500P-201ENST00000362349 107 ntBASIC1.73□□□□□ -2.13
USP47Q96K76 SNORD115-3-201ENST00000363100 82 ntBASIC1.73□□□□□ -2.13
USP47Q96K76 RNU5F-7P-201ENST00000363696 115 ntBASIC1.73□□□□□ -2.13
USP47Q96K76 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
USP47Q96K76 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.73□□□□□ -2.13
USP47Q96K76 RNU6-622P-201ENST00000384272 103 ntBASIC1.73□□□□□ -2.13
USP47Q96K76 MIR578-201ENST00000384828 96 ntBASIC1.73□□□□□ -2.13
USP47Q96K76 RNU2-39P-201ENST00000410604 198 ntBASIC1.73□□□□□ -2.13
USP47Q96K76 ELOCP4-201ENST00000420090 333 ntBASIC1.73□□□□□ -2.13
USP47Q96K76 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.73□□□□□ -2.13
USP47Q96K76 AL353689.1-201ENST00000438895 199 ntBASIC1.73□□□□□ -2.13
USP47Q96K76 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.73□□□□□ -2.13
USP47Q96K76 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.73□□□□□ -2.13
USP47Q96K76 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.73□□□□□ -2.13
USP47Q96K76 MTND2P14-201ENST00000482139 351 ntBASIC1.73□□□□□ -2.13
USP47Q96K76 MRPS17P9-201ENST00000511924 393 ntBASIC1.73□□□□□ -2.13
USP47Q96K76 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.73□□□□□ -2.13
USP47Q96K76 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC1.73□□□□□ -2.13
USP47Q96K76 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC1.73□□□□□ -2.13
USP47Q96K76 CLIC4P2-201ENST00000601934 717 ntBASIC1.73□□□□□ -2.13
USP47Q96K76 AL773524.1-201ENST00000614065 229 ntBASIC1.73□□□□□ -2.13
USP47Q96K76 AC092140.2-201ENST00000618027 521 ntBASIC1.73□□□□□ -2.13
USP47Q96K76 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.73□□□□□ -2.13
USP47Q96K76 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.73□□□□□ -2.13
USP47Q96K76 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
USP47Q96K76 HAUS6P2-201ENST00000433254 2404 ntBASIC1.73□□□□□ -2.13
USP47Q96K76 RNU6-655P-201ENST00000362858 107 ntBASIC1.72□□□□□ -2.13
USP47Q96K76 SNORD14B-201ENST00000364533 90 ntBASIC1.72□□□□□ -2.13
USP47Q96K76 SNORA24.1-201ENST00000384401 135 ntBASIC1.72□□□□□ -2.13
USP47Q96K76 SNORA40.19-201ENST00000390846 128 ntBASIC1.72□□□□□ -2.13
USP47Q96K76 RNU2-32P-201ENST00000411193 191 ntBASIC1.72□□□□□ -2.13
USP47Q96K76 RNA5SP111-201ENST00000411386 101 ntBASIC1.72□□□□□ -2.13
USP47Q96K76 RPL31P63-201ENST00000422565 375 ntBASIC1.72□□□□□ -2.13
USP47Q96K76 XKRYP1-201ENST00000423438 492 ntBASIC1.72□□□□□ -2.13
USP47Q96K76 XKRYP2-201ENST00000432915 492 ntBASIC1.72□□□□□ -2.13
USP47Q96K76 RPL23AP6-201ENST00000446637 472 ntBASIC1.72□□□□□ -2.13
USP47Q96K76 MTCO2P29-201ENST00000465212 189 ntBASIC1.72□□□□□ -2.13
USP47Q96K76 COX6CP14-201ENST00000469580 174 ntBASIC1.72□□□□□ -2.13
USP47Q96K76 RBBP4P6-201ENST00000508098 202 ntBASIC1.72□□□□□ -2.13
USP47Q96K76 AC117522.1-201ENST00000509821 380 ntBASIC1.72□□□□□ -2.13
USP47Q96K76 Y_RNA.687-201ENST00000516558 91 ntBASIC1.72□□□□□ -2.13
USP47Q96K76 AP005660.1-201ENST00000522972 293 ntBASIC1.72□□□□□ -2.13
USP47Q96K76 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.72□□□□□ -2.13
USP47Q96K76 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.72□□□□□ -2.13
USP47Q96K76 BNIP3P6-201ENST00000549284 499 ntBASIC1.72□□□□□ -2.13
USP47Q96K76 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.72□□□□□ -2.13
USP47Q96K76 MIR4299-201ENST00000577899 72 ntBASIC1.72□□□□□ -2.13
USP47Q96K76 HMGN1P30-201ENST00000589286 268 ntBASIC1.72□□□□□ -2.13
USP47Q96K76 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.72□□□□□ -2.13
USP47Q96K76 AC243960.4-201ENST00000600532 288 ntBASIC1.72□□□□□ -2.13
USP47Q96K76 AL136370.1-201ENST00000608166 691 ntBASIC1.72□□□□□ -2.13
USP47Q96K76 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.72□□□□□ -2.13
USP47Q96K76 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 135.4 ms