Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 SNORD56-201ENST00000413522 71 ntBASIC3.31□□□□□ -1.88
PDLIM2Q96JY6 AC009310.1-201ENST00000414414 451 ntBASIC3.31□□□□□ -1.88
PDLIM2Q96JY6 Z85995.1-201ENST00000415547 335 ntBASIC3.31□□□□□ -1.88
PDLIM2Q96JY6 TOMM20P4-201ENST00000427861 435 ntBASIC3.31□□□□□ -1.88
PDLIM2Q96JY6 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.31□□□□□ -1.88
PDLIM2Q96JY6 AL356867.1-201ENST00000429623 299 ntBASIC3.31□□□□□ -1.88
PDLIM2Q96JY6 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.31□□□□□ -1.88
PDLIM2Q96JY6 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
PDLIM2Q96JY6 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.31□□□□□ -1.88
PDLIM2Q96JY6 MTCO3P8-201ENST00000453691 755 ntBASIC3.31□□□□□ -1.88
PDLIM2Q96JY6 AL583843.1-201ENST00000456070 346 ntBASIC3.31□□□□□ -1.88
PDLIM2Q96JY6 RPS20P22-201ENST00000473700 357 ntBASIC3.31□□□□□ -1.88
PDLIM2Q96JY6 RNU6-388P-201ENST00000517012 105 ntBASIC3.31□□□□□ -1.88
PDLIM2Q96JY6 RNU6-389P-201ENST00000517048 105 ntBASIC3.31□□□□□ -1.88
PDLIM2Q96JY6 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.31□□□□□ -1.88
PDLIM2Q96JY6 ATP5F1P5-201ENST00000526403 760 ntBASIC3.31□□□□□ -1.88
PDLIM2Q96JY6 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.31□□□□□ -1.88
PDLIM2Q96JY6 AP000889.1-201ENST00000530968 660 ntBASIC3.31□□□□□ -1.88
PDLIM2Q96JY6 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.31□□□□□ -1.88
PDLIM2Q96JY6 HMGB1P14-201ENST00000557424 591 ntBASIC3.31□□□□□ -1.88
PDLIM2Q96JY6 MIR4444-1-201ENST00000581696 74 ntBASIC3.31□□□□□ -1.88
PDLIM2Q96JY6 MIR4444-2-201ENST00000584390 74 ntBASIC3.31□□□□□ -1.88
PDLIM2Q96JY6 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.31□□□□□ -1.88
PDLIM2Q96JY6 AL158827.2-201ENST00000602494 330 ntBASIC3.31□□□□□ -1.88
PDLIM2Q96JY6 AC009314.1-201ENST00000603871 304 ntBASIC3.31□□□□□ -1.88
PDLIM2Q96JY6 MTND4LP5-201ENST00000605152 292 ntBASIC3.31□□□□□ -1.88
PDLIM2Q96JY6 AP002826.1-201ENST00000608835 315 ntBASIC3.31□□□□□ -1.88
PDLIM2Q96JY6 MIR1244-1-201ENST00000612829 85 ntBASIC3.31□□□□□ -1.88
PDLIM2Q96JY6 MIR8062-201ENST00000621515 85 ntBASIC3.31□□□□□ -1.88
PDLIM2Q96JY6 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.31□□□□□ -1.88
PDLIM2Q96JY6 AC138627.2-201ENST00000624202 601 ntBASIC3.31□□□□□ -1.88
PDLIM2Q96JY6 AL691447.3-201ENST00000635020 330 ntBASIC3.31□□□□□ -1.88
PDLIM2Q96JY6 MIR1244-3-201ENST00000635744 85 ntBASIC3.31□□□□□ -1.88
PDLIM2Q96JY6 MIR1244-2-201ENST00000636449 85 ntBASIC3.31□□□□□ -1.88
PDLIM2Q96JY6 MIR1244-4-202ENST00000636813 85 ntBASIC3.31□□□□□ -1.88
PDLIM2Q96JY6 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.31□□□□□ -1.88
PDLIM2Q96JY6 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.31□□□□□ -1.88
PDLIM2Q96JY6 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.3□□□□□ -1.88
PDLIM2Q96JY6 SNORA71.3-201ENST00000362582 128 ntBASIC3.3□□□□□ -1.88
PDLIM2Q96JY6 RNU6-827P-201ENST00000365553 106 ntBASIC3.3□□□□□ -1.88
PDLIM2Q96JY6 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PDLIM2Q96JY6 RNU6-1181P-201ENST00000384191 106 ntBASIC3.3□□□□□ -1.88
PDLIM2Q96JY6 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
PDLIM2Q96JY6 AL591034.2-201ENST00000402839 359 ntBASIC3.3□□□□□ -1.88
PDLIM2Q96JY6 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.3□□□□□ -1.88
PDLIM2Q96JY6 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.3□□□□□ -1.88
PDLIM2Q96JY6 MYL8P-204ENST00000431574 518 ntBASIC3.3□□□□□ -1.88
PDLIM2Q96JY6 AC092573.2-201ENST00000434546 243 ntBASIC3.3□□□□□ -1.88
PDLIM2Q96JY6 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.3□□□□□ -1.88
PDLIM2Q96JY6 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.3□□□□□ -1.88
PDLIM2Q96JY6 AC093852.1-201ENST00000503587 266 ntBASIC3.3□□□□□ -1.88
PDLIM2Q96JY6 AC144568.1-201ENST00000520139 137 ntBASIC3.3□□□□□ -1.88
PDLIM2Q96JY6 AC025755.1-201ENST00000521306 278 ntBASIC3.3□□□□□ -1.88
PDLIM2Q96JY6 AC004486.1-201ENST00000546846 233 ntBASIC3.3□□□□□ -1.88
PDLIM2Q96JY6 AC004584.2-201ENST00000570407 410 ntBASIC3.3□□□□□ -1.88
PDLIM2Q96JY6 AC005357.1-201ENST00000588399 301 ntBASIC3.3□□□□□ -1.88
PDLIM2Q96JY6 AC125232.2-201ENST00000592457 143 ntBASIC3.3□□□□□ -1.88
PDLIM2Q96JY6 AC008739.3-201ENST00000603262 127 ntBASIC3.3□□□□□ -1.88
PDLIM2Q96JY6 AL355810.1-201ENST00000614629 552 ntBASIC3.3□□□□□ -1.88
PDLIM2Q96JY6 HMGB1P24-202ENST00000615653 685 ntBASIC3.3□□□□□ -1.88
PDLIM2Q96JY6 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
PDLIM2Q96JY6 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PDLIM2Q96JY6 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PDLIM2Q96JY6 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.29□□□□□ -1.88
PDLIM2Q96JY6 SNORD14B-201ENST00000364533 90 ntBASIC3.29□□□□□ -1.88
PDLIM2Q96JY6 Y_RNA.489-201ENST00000384410 101 ntBASIC3.29□□□□□ -1.88
PDLIM2Q96JY6 RNA5SP171-201ENST00000391071 115 ntBASIC3.29□□□□□ -1.88
PDLIM2Q96JY6 RPL21P1-201ENST00000399532 476 ntBASIC3.29□□□□□ -1.88
PDLIM2Q96JY6 Y_RNA.623-201ENST00000411128 95 ntBASIC3.29□□□□□ -1.88
PDLIM2Q96JY6 NDUFB4P7-201ENST00000423198 363 ntBASIC3.29□□□□□ -1.88
PDLIM2Q96JY6 RPL27AP8-201ENST00000424277 446 ntBASIC3.29□□□□□ -1.88
PDLIM2Q96JY6 AC092423.1-201ENST00000430165 186 ntBASIC3.29□□□□□ -1.88
PDLIM2Q96JY6 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.29□□□□□ -1.88
PDLIM2Q96JY6 RPS24P6-201ENST00000452670 400 ntBASIC3.29□□□□□ -1.88
PDLIM2Q96JY6 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.29□□□□□ -1.88
PDLIM2Q96JY6 snoU13.4-201ENST00000458916 104 ntBASIC3.29□□□□□ -1.88
PDLIM2Q96JY6 U8.21-201ENST00000459536 136 ntBASIC3.29□□□□□ -1.88
PDLIM2Q96JY6 RPL23AP45-201ENST00000476406 468 ntBASIC3.29□□□□□ -1.88
PDLIM2Q96JY6 RPS27AP9-201ENST00000477681 438 ntBASIC3.29□□□□□ -1.88
PDLIM2Q96JY6 RPS29P2-201ENST00000479278 136 ntBASIC3.29□□□□□ -1.88
PDLIM2Q96JY6 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.29□□□□□ -1.88
PDLIM2Q96JY6 RNU6-826P-201ENST00000516827 104 ntBASIC3.29□□□□□ -1.88
PDLIM2Q96JY6 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.29□□□□□ -1.88
PDLIM2Q96JY6 AP005902.1-201ENST00000521358 186 ntBASIC3.29□□□□□ -1.88
PDLIM2Q96JY6 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.29□□□□□ -1.88
PDLIM2Q96JY6 MIR3670-2-201ENST00000582974 65 ntBASIC3.29□□□□□ -1.88
PDLIM2Q96JY6 MIR3670-1-201ENST00000584160 65 ntBASIC3.29□□□□□ -1.88
PDLIM2Q96JY6 MIR3670-3-201ENST00000584855 65 ntBASIC3.29□□□□□ -1.88
PDLIM2Q96JY6 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.29□□□□□ -1.88
PDLIM2Q96JY6 VN1R91P-201ENST00000594377 169 ntBASIC3.29□□□□□ -1.88
PDLIM2Q96JY6 MIR3670-4-201ENST00000612260 65 ntBASIC3.29□□□□□ -1.88
PDLIM2Q96JY6 AC004852.3-201ENST00000614131 326 ntBASIC3.29□□□□□ -1.88
PDLIM2Q96JY6 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PDLIM2Q96JY6 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
PDLIM2Q96JY6 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PDLIM2Q96JY6 Y_RNA.222-201ENST00000364264 102 ntBASIC3.28□□□□□ -1.88
PDLIM2Q96JY6 Y_RNA.288-201ENST00000364854 92 ntBASIC3.28□□□□□ -1.88
PDLIM2Q96JY6 Y_RNA.461-201ENST00000384263 103 ntBASIC3.28□□□□□ -1.88
PDLIM2Q96JY6 MIR10A-201ENST00000385043 110 ntBASIC3.28□□□□□ -1.88
PDLIM2Q96JY6 SNORD67-201ENST00000390833 111 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms