Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 AC007742.1-201ENST00000425789 329 ntBASIC-0.11□□□□□ -2.43
SPG11Q96JI7 ELOCP26-201ENST00000436067 329 ntBASIC-0.11□□□□□ -2.43
SPG11Q96JI7 RNA5SP269-201ENST00000459032 137 ntBASIC-0.11□□□□□ -2.43
SPG11Q96JI7 AC112771.1-201ENST00000463581 102 ntBASIC-0.11□□□□□ -2.43
SPG11Q96JI7 WDR78-207ENST00000488333 613 ntTSL 3 BASIC-0.11□□□□□ -2.43
SPG11Q96JI7 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC-0.11□□□□□ -2.43
SPG11Q96JI7 RPS26P48-201ENST00000491713 339 ntBASIC-0.11□□□□□ -2.43
SPG11Q96JI7 AC114981.1-201ENST00000503897 678 ntBASIC-0.11□□□□□ -2.43
SPG11Q96JI7 AC022493.2-201ENST00000506122 481 ntBASIC-0.11□□□□□ -2.43
SPG11Q96JI7 RN7SKP258-201ENST00000517151 304 ntBASIC-0.11□□□□□ -2.43
SPG11Q96JI7 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC-0.11□□□□□ -2.43
SPG11Q96JI7 AL442163.3-201ENST00000554110 156 ntBASIC-0.11□□□□□ -2.43
SPG11Q96JI7 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC-0.11□□□□□ -2.43
SPG11Q96JI7 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC-0.11□□□□□ -2.43
SPG11Q96JI7 SNORA42.1-201ENST00000363515 137 ntBASIC-0.12□□□□□ -2.43
SPG11Q96JI7 SNORA25B-201ENST00000365507 128 ntBASIC-0.12□□□□□ -2.43
SPG11Q96JI7 SNORD51-201ENST00000384320 80 ntBASIC-0.12□□□□□ -2.43
SPG11Q96JI7 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC-0.12□□□□□ -2.43
SPG11Q96JI7 SNORA16.2-201ENST00000390991 127 ntBASIC-0.12□□□□□ -2.43
SPG11Q96JI7 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC-0.12□□□□□ -2.43
SPG11Q96JI7 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC-0.12□□□□□ -2.43
SPG11Q96JI7 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC-0.12□□□□□ -2.43
SPG11Q96JI7 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC-0.12□□□□□ -2.43
SPG11Q96JI7 AC098831.1-201ENST00000440661 216 ntBASIC-0.12□□□□□ -2.43
SPG11Q96JI7 U8.21-201ENST00000459536 136 ntBASIC-0.12□□□□□ -2.43
SPG11Q96JI7 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC-0.12□□□□□ -2.43
SPG11Q96JI7 AC105758.1-201ENST00000506038 399 ntBASIC-0.12□□□□□ -2.43
SPG11Q96JI7 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC-0.12□□□□□ -2.43
SPG11Q96JI7 CR383656.7-201ENST00000548164 174 ntBASIC-0.12□□□□□ -2.43
SPG11Q96JI7 AC025588.3-201ENST00000604182 274 ntBASIC-0.12□□□□□ -2.43
SPG11Q96JI7 AC112220.3-201ENST00000605502 502 ntBASIC-0.12□□□□□ -2.43
SPG11Q96JI7 AL355802.4-201ENST00000607635 548 ntBASIC-0.12□□□□□ -2.43
SPG11Q96JI7 AP005229.2-201ENST00000609980 697 ntBASIC-0.12□□□□□ -2.43
SPG11Q96JI7 AL353149.1-201ENST00000610667 244 ntBASIC-0.12□□□□□ -2.43
SPG11Q96JI7 AL596245.1-201ENST00000618994 362 ntBASIC-0.12□□□□□ -2.43
SPG11Q96JI7 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC-0.12□□□□□ -2.43
SPG11Q96JI7 LINC02555-201ENST00000563933 1951 ntBASIC-0.12□□□□□ -2.43
SPG11Q96JI7 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC-0.12□□□□□ -2.43
SPG11Q96JI7 OR5T3-201ENST00000303059 1023 ntBASIC-0.12□□□□□ -2.43
SPG11Q96JI7 SNORA81-201ENST00000408493 178 ntBASIC-0.12□□□□□ -2.43
SPG11Q96JI7 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC-0.12□□□□□ -2.43
SPG11Q96JI7 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC-0.12□□□□□ -2.43
SPG11Q96JI7 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC-0.12□□□□□ -2.43
SPG11Q96JI7 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC-0.12□□□□□ -2.43
SPG11Q96JI7 KRTAP13-6P-201ENST00000508999 371 ntBASIC-0.12□□□□□ -2.43
SPG11Q96JI7 RNU6-27P-201ENST00000516146 107 ntBASIC-0.12□□□□□ -2.43
SPG11Q96JI7 RNA5SP461-201ENST00000516451 104 ntBASIC-0.12□□□□□ -2.43
SPG11Q96JI7 MIR4431-201ENST00000579990 94 ntBASIC-0.12□□□□□ -2.43
SPG11Q96JI7 ZNF92P3-201ENST00000596594 954 ntBASIC-0.12□□□□□ -2.43
SPG11Q96JI7 BNIP3P23-201ENST00000599655 511 ntBASIC-0.12□□□□□ -2.43
SPG11Q96JI7 AL583856.2-201ENST00000606298 543 ntBASIC-0.12□□□□□ -2.43
SPG11Q96JI7 AC021506.2-201ENST00000612354 169 ntBASIC-0.12□□□□□ -2.43
SPG11Q96JI7 Y_RNA.490-201ENST00000384413 102 ntBASIC-0.13□□□□□ -2.43
SPG11Q96JI7 RNU6-1035P-201ENST00000384477 107 ntBASIC-0.13□□□□□ -2.43
SPG11Q96JI7 RNA5SP56-201ENST00000410277 118 ntBASIC-0.13□□□□□ -2.43
SPG11Q96JI7 RAB28P5-201ENST00000427490 651 ntBASIC-0.13□□□□□ -2.43
SPG11Q96JI7 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC-0.13□□□□□ -2.43
SPG11Q96JI7 SNRPEP9-201ENST00000436794 238 ntBASIC-0.13□□□□□ -2.43
SPG11Q96JI7 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC-0.13□□□□□ -2.43
SPG11Q96JI7 AC010469.2-201ENST00000496412 480 ntBASIC-0.13□□□□□ -2.43
SPG11Q96JI7 HMGB1P29-201ENST00000505659 499 ntBASIC-0.13□□□□□ -2.43
SPG11Q96JI7 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC-0.13□□□□□ -2.43
SPG11Q96JI7 AC104057.1-201ENST00000515547 497 ntBASIC-0.13□□□□□ -2.43
SPG11Q96JI7 RNU6-319P-201ENST00000516025 108 ntBASIC-0.13□□□□□ -2.43
SPG11Q96JI7 RNA5SP168-201ENST00000516642 112 ntBASIC-0.13□□□□□ -2.43
SPG11Q96JI7 RNA5SP437-201ENST00000517249 129 ntBASIC-0.13□□□□□ -2.43
SPG11Q96JI7 AC006199.1-201ENST00000548728 219 ntBASIC-0.13□□□□□ -2.43
SPG11Q96JI7 AL390237.1-201ENST00000404226 1415 ntBASIC-0.13□□□□□ -2.43
SPG11Q96JI7 MTND5P17-201ENST00000418405 1603 ntBASIC-0.13□□□□□ -2.43
SPG11Q96JI7 RPL22P22-201ENST00000395439 379 ntBASIC-0.13□□□□□ -2.43
SPG11Q96JI7 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC-0.13□□□□□ -2.43
SPG11Q96JI7 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC-0.13□□□□□ -2.43
SPG11Q96JI7 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC-0.13□□□□□ -2.43
SPG11Q96JI7 AL049734.2-201ENST00000441066 616 ntBASIC-0.13□□□□□ -2.43
SPG11Q96JI7 AC048334.1-201ENST00000477975 159 ntBASIC-0.13□□□□□ -2.43
SPG11Q96JI7 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC-0.13□□□□□ -2.43
SPG11Q96JI7 RNU2-12P-201ENST00000517216 168 ntBASIC-0.13□□□□□ -2.43
SPG11Q96JI7 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC-0.13□□□□□ -2.43
SPG11Q96JI7 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC-0.13□□□□□ -2.43
SPG11Q96JI7 AL391813.1-201ENST00000603098 260 ntBASIC-0.13□□□□□ -2.43
SPG11Q96JI7 ANKRD36BP1-202ENST00000604892 1417 ntBASIC-0.13□□□□□ -2.43
SPG11Q96JI7 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC-0.14□□□□□ -2.43
SPG11Q96JI7 RNA5SP128-201ENST00000365305 116 ntBASIC-0.14□□□□□ -2.43
SPG11Q96JI7 Y_RNA.403-201ENST00000383977 101 ntBASIC-0.14□□□□□ -2.43
SPG11Q96JI7 SNORD65-201ENST00000391079 73 ntBASIC-0.14□□□□□ -2.43
SPG11Q96JI7 MRPS18CP6-201ENST00000423587 223 ntBASIC-0.14□□□□□ -2.43
SPG11Q96JI7 UBE2V1P4-201ENST00000425374 344 ntBASIC-0.14□□□□□ -2.43
SPG11Q96JI7 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC-0.14□□□□□ -2.43
SPG11Q96JI7 TRAPPC13P1-201ENST00000435991 1062 ntBASIC-0.14□□□□□ -2.43
SPG11Q96JI7 UBE2V1P8-201ENST00000437166 265 ntBASIC-0.14□□□□□ -2.43
SPG11Q96JI7 PTGES3P1-201ENST00000439531 483 ntBASIC-0.14□□□□□ -2.43
SPG11Q96JI7 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC-0.14□□□□□ -2.43
SPG11Q96JI7 AC011005.2-201ENST00000487324 359 ntBASIC-0.14□□□□□ -2.43
SPG11Q96JI7 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.14□□□□□ -2.43
SPG11Q96JI7 RNVU1-2-201ENST00000516326 135 ntBASIC-0.14□□□□□ -2.43
SPG11Q96JI7 SUMO2P16-201ENST00000519475 264 ntBASIC-0.14□□□□□ -2.43
SPG11Q96JI7 MDM2-232ENST00000544561 213 ntTSL 5 BASIC-0.14□□□□□ -2.43
SPG11Q96JI7 AC090888.2-201ENST00000559765 1144 ntBASIC-0.14□□□□□ -2.43
SPG11Q96JI7 AP003465.2-201ENST00000602571 373 ntBASIC-0.14□□□□□ -2.43
SPG11Q96JI7 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC-0.14□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms