Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 RPL31P41-201ENST00000477967 372 ntBASIC3.51□□□□□ -1.85
CHMP4CQ96CF2 RN7SL499P-201ENST00000481141 276 ntBASIC3.51□□□□□ -1.85
CHMP4CQ96CF2 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.51□□□□□ -1.85
CHMP4CQ96CF2 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.51□□□□□ -1.85
CHMP4CQ96CF2 AC007536.1-201ENST00000533382 349 ntBASIC3.51□□□□□ -1.85
CHMP4CQ96CF2 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.51□□□□□ -1.85
CHMP4CQ96CF2 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.51□□□□□ -1.85
CHMP4CQ96CF2 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.51□□□□□ -1.85
CHMP4CQ96CF2 BNIP3P16-201ENST00000589779 534 ntBASIC3.51□□□□□ -1.85
CHMP4CQ96CF2 MIR6733-201ENST00000635723 61 ntBASIC3.51□□□□□ -1.85
CHMP4CQ96CF2 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.51□□□□□ -1.85
CHMP4CQ96CF2 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
CHMP4CQ96CF2 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
CHMP4CQ96CF2 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CHMP4CQ96CF2 RNU6-487P-201ENST00000365430 104 ntBASIC3.5□□□□□ -1.85
CHMP4CQ96CF2 Y_RNA.529-201ENST00000384586 119 ntBASIC3.5□□□□□ -1.85
CHMP4CQ96CF2 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.5□□□□□ -1.85
CHMP4CQ96CF2 AC104332.2-201ENST00000429959 156 ntBASIC3.5□□□□□ -1.85
CHMP4CQ96CF2 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.5□□□□□ -1.85
CHMP4CQ96CF2 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.5□□□□□ -1.85
CHMP4CQ96CF2 AP001324.2-201ENST00000461163 319 ntBASIC3.5□□□□□ -1.85
CHMP4CQ96CF2 MTND4P17-201ENST00000470444 350 ntBASIC3.5□□□□□ -1.85
CHMP4CQ96CF2 AC114801.2-201ENST00000503825 781 ntBASIC3.5□□□□□ -1.85
CHMP4CQ96CF2 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.5□□□□□ -1.85
CHMP4CQ96CF2 RNU5B-3P-201ENST00000516601 115 ntBASIC3.5□□□□□ -1.85
CHMP4CQ96CF2 SNORA31.18-201ENST00000517043 134 ntBASIC3.5□□□□□ -1.85
CHMP4CQ96CF2 SNORA31.23-201ENST00000517219 133 ntBASIC3.5□□□□□ -1.85
CHMP4CQ96CF2 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.5□□□□□ -1.85
CHMP4CQ96CF2 RPS3AP23-202ENST00000574601 686 ntBASIC3.5□□□□□ -1.85
CHMP4CQ96CF2 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.5□□□□□ -1.85
CHMP4CQ96CF2 RPL23AP78-201ENST00000599928 470 ntBASIC3.5□□□□□ -1.85
CHMP4CQ96CF2 VN1R107P-201ENST00000601784 209 ntBASIC3.5□□□□□ -1.85
CHMP4CQ96CF2 RNU6-91P-201ENST00000607774 107 ntBASIC3.5□□□□□ -1.85
CHMP4CQ96CF2 AC005046.1-201ENST00000608515 625 ntBASIC3.5□□□□□ -1.85
CHMP4CQ96CF2 AL132765.2-201ENST00000610812 351 ntBASIC3.5□□□□□ -1.85
CHMP4CQ96CF2 uc_338.14-201ENST00000613162 166 ntBASIC3.5□□□□□ -1.85
CHMP4CQ96CF2 AC090617.7-201ENST00000623952 126 ntBASIC3.5□□□□□ -1.85
CHMP4CQ96CF2 AC138627.2-201ENST00000624202 601 ntBASIC3.5□□□□□ -1.85
CHMP4CQ96CF2 MIR1302-1-201ENST00000637932 143 ntBASIC3.5□□□□□ -1.85
CHMP4CQ96CF2 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.5□□□□□ -1.85
CHMP4CQ96CF2 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.49□□□□□ -1.85
CHMP4CQ96CF2 AC073325.2-201ENST00000339545 159 ntBASIC3.49□□□□□ -1.85
CHMP4CQ96CF2 Y_RNA.151-201ENST00000363566 112 ntBASIC3.49□□□□□ -1.85
CHMP4CQ96CF2 RNU6-1317P-201ENST00000364582 104 ntBASIC3.49□□□□□ -1.85
CHMP4CQ96CF2 RNU6-1083P-201ENST00000384022 107 ntBASIC3.49□□□□□ -1.85
CHMP4CQ96CF2 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CHMP4CQ96CF2 AL133475.1-201ENST00000404414 305 ntBASIC3.49□□□□□ -1.85
CHMP4CQ96CF2 RN7SKP158-201ENST00000410453 326 ntBASIC3.49□□□□□ -1.85
CHMP4CQ96CF2 AC138623.1-201ENST00000418060 216 ntBASIC3.49□□□□□ -1.85
CHMP4CQ96CF2 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CHMP4CQ96CF2 AC004383.1-201ENST00000438135 289 ntBASIC3.49□□□□□ -1.85
CHMP4CQ96CF2 AC009296.1-201ENST00000443146 155 ntBASIC3.49□□□□□ -1.85
CHMP4CQ96CF2 SEM1P1-201ENST00000506694 209 ntBASIC3.49□□□□□ -1.85
CHMP4CQ96CF2 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.49□□□□□ -1.85
CHMP4CQ96CF2 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.49□□□□□ -1.85
CHMP4CQ96CF2 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.49□□□□□ -1.85
CHMP4CQ96CF2 AC113139.1-201ENST00000605049 239 ntBASIC3.49□□□□□ -1.85
CHMP4CQ96CF2 AC124303.1-201ENST00000605703 360 ntBASIC3.49□□□□□ -1.85
CHMP4CQ96CF2 AC019193.3-201ENST00000609144 554 ntBASIC3.49□□□□□ -1.85
CHMP4CQ96CF2 AC096772.1-201ENST00000609146 564 ntBASIC3.49□□□□□ -1.85
CHMP4CQ96CF2 AC090115.4-201ENST00000609970 188 ntBASIC3.49□□□□□ -1.85
CHMP4CQ96CF2 AL161423.1-201ENST00000613700 262 ntBASIC3.49□□□□□ -1.85
CHMP4CQ96CF2 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.49□□□□□ -1.85
CHMP4CQ96CF2 AC096644.4-201ENST00000563417 2912 ntBASIC3.48□□□□□ -1.85
CHMP4CQ96CF2 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CHMP4CQ96CF2 RNU1-140P-201ENST00000365040 165 ntBASIC3.48□□□□□ -1.85
CHMP4CQ96CF2 Y_RNA.339-201ENST00000365325 102 ntBASIC3.48□□□□□ -1.85
CHMP4CQ96CF2 SNORA9.2-201ENST00000365361 133 ntBASIC3.48□□□□□ -1.85
CHMP4CQ96CF2 Y_RNA.384-201ENST00000383909 102 ntBASIC3.48□□□□□ -1.85
CHMP4CQ96CF2 MIR517A-201ENST00000385001 87 ntBASIC3.48□□□□□ -1.85
CHMP4CQ96CF2 SNORA59A-201ENST00000459326 152 ntBASIC3.48□□□□□ -1.85
CHMP4CQ96CF2 FGF7P4-201ENST00000509595 295 ntBASIC3.48□□□□□ -1.85
CHMP4CQ96CF2 AC116337.1-201ENST00000509680 687 ntBASIC3.48□□□□□ -1.85
CHMP4CQ96CF2 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.48□□□□□ -1.85
CHMP4CQ96CF2 RNU6-612P-201ENST00000516909 102 ntBASIC3.48□□□□□ -1.85
CHMP4CQ96CF2 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.48□□□□□ -1.85
CHMP4CQ96CF2 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.48□□□□□ -1.85
CHMP4CQ96CF2 RAB11AP2-201ENST00000545905 639 ntBASIC3.48□□□□□ -1.85
CHMP4CQ96CF2 AC009233.1-201ENST00000616477 371 ntBASIC3.48□□□□□ -1.85
CHMP4CQ96CF2 AC104985.2-201ENST00000620598 500 ntBASIC3.48□□□□□ -1.85
CHMP4CQ96CF2 AC112487.2-201ENST00000637950 304 ntBASIC3.48□□□□□ -1.85
CHMP4CQ96CF2 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.48□□□□□ -1.85
CHMP4CQ96CF2 AC000403.1-201ENST00000613696 3585 ntBASIC3.48□□□□□ -1.85
CHMP4CQ96CF2 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CHMP4CQ96CF2 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
CHMP4CQ96CF2 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
CHMP4CQ96CF2 RNU6-593P-201ENST00000364716 112 ntBASIC3.47□□□□□ -1.85
CHMP4CQ96CF2 SNORD21-201ENST00000383953 95 ntBASIC3.47□□□□□ -1.85
CHMP4CQ96CF2 RNU6-601P-201ENST00000384540 107 ntBASIC3.47□□□□□ -1.85
CHMP4CQ96CF2 RNU6-306P-201ENST00000384617 107 ntBASIC3.47□□□□□ -1.85
CHMP4CQ96CF2 AL513475.1-201ENST00000406602 315 ntBASIC3.47□□□□□ -1.85
CHMP4CQ96CF2 RNA5SP390-201ENST00000410191 113 ntBASIC3.47□□□□□ -1.85
CHMP4CQ96CF2 RNA5SP344-201ENST00000411081 104 ntBASIC3.47□□□□□ -1.85
CHMP4CQ96CF2 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.47□□□□□ -1.85
CHMP4CQ96CF2 FABP5P14-201ENST00000437273 393 ntBASIC3.47□□□□□ -1.85
CHMP4CQ96CF2 DAP3P1-201ENST00000441522 278 ntBASIC3.47□□□□□ -1.85
CHMP4CQ96CF2 AC105137.2-201ENST00000569073 466 ntBASIC3.47□□□□□ -1.85
CHMP4CQ96CF2 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.47□□□□□ -1.85
CHMP4CQ96CF2 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.47□□□□□ -1.85
CHMP4CQ96CF2 AC018889.1-201ENST00000605372 397 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms