Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.15□□□□□ -1.9
ATG4AQ8WYN0 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
ATG4AQ8WYN0 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
ATG4AQ8WYN0 MTND5P9-201ENST00000503854 1755 ntBASIC3.15□□□□□ -1.9
ATG4AQ8WYN0 SNORA63.1-201ENST00000362493 131 ntBASIC3.15□□□□□ -1.91
ATG4AQ8WYN0 RNU6-527P-201ENST00000363425 104 ntBASIC3.15□□□□□ -1.91
ATG4AQ8WYN0 SNORA7.4-201ENST00000384249 137 ntBASIC3.15□□□□□ -1.91
ATG4AQ8WYN0 Y_RNA.577-201ENST00000384794 101 ntBASIC3.15□□□□□ -1.91
ATG4AQ8WYN0 MIR183-201ENST00000384958 110 ntBASIC3.15□□□□□ -1.91
ATG4AQ8WYN0 RNA5SP38-201ENST00000410750 119 ntBASIC3.15□□□□□ -1.91
ATG4AQ8WYN0 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.15□□□□□ -1.91
ATG4AQ8WYN0 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.15□□□□□ -1.91
ATG4AQ8WYN0 NUP35P1-201ENST00000422734 947 ntBASIC3.15□□□□□ -1.91
ATG4AQ8WYN0 MRPS18CP6-201ENST00000423587 223 ntBASIC3.15□□□□□ -1.91
ATG4AQ8WYN0 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.15□□□□□ -1.91
ATG4AQ8WYN0 RPL7P49-201ENST00000471402 708 ntBASIC3.15□□□□□ -1.91
ATG4AQ8WYN0 AP004217.1-201ENST00000480579 346 ntBASIC3.15□□□□□ -1.91
ATG4AQ8WYN0 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.15□□□□□ -1.91
ATG4AQ8WYN0 RN7SL633P-201ENST00000488974 297 ntBASIC3.15□□□□□ -1.91
ATG4AQ8WYN0 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.15□□□□□ -1.91
ATG4AQ8WYN0 RN7SKP43-201ENST00000516173 320 ntBASIC3.15□□□□□ -1.91
ATG4AQ8WYN0 AP000867.2-201ENST00000532468 320 ntBASIC3.15□□□□□ -1.91
ATG4AQ8WYN0 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.15□□□□□ -1.91
ATG4AQ8WYN0 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.15□□□□□ -1.91
ATG4AQ8WYN0 MIR5696-201ENST00000578474 85 ntBASIC3.15□□□□□ -1.91
ATG4AQ8WYN0 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.15□□□□□ -1.91
ATG4AQ8WYN0 HMGN2P15-201ENST00000585707 270 ntBASIC3.15□□□□□ -1.91
ATG4AQ8WYN0 AC092447.9-201ENST00000603395 144 ntBASIC3.15□□□□□ -1.91
ATG4AQ8WYN0 AC069200.1-201ENST00000609511 323 ntBASIC3.15□□□□□ -1.91
ATG4AQ8WYN0 AC018692.3-201ENST00000623929 123 ntBASIC3.15□□□□□ -1.91
ATG4AQ8WYN0 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
ATG4AQ8WYN0 AP001148.1-201ENST00000624124 2359 ntBASIC3.15□□□□□ -1.91
ATG4AQ8WYN0 ADAM3A-203ENST00000461344 2157 ntBASIC3.14□□□□□ -1.91
ATG4AQ8WYN0 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.14□□□□□ -1.91
ATG4AQ8WYN0 AC093010.3-201ENST00000570269 15214 ntBASIC3.14□□□□□ -1.91
ATG4AQ8WYN0 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
ATG4AQ8WYN0 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.14□□□□□ -1.91
ATG4AQ8WYN0 SNORD50.1-201ENST00000362987 71 ntBASIC3.14□□□□□ -1.91
ATG4AQ8WYN0 Y_RNA.80-201ENST00000362996 102 ntBASIC3.14□□□□□ -1.91
ATG4AQ8WYN0 RNU6-1280P-201ENST00000365211 107 ntBASIC3.14□□□□□ -1.91
ATG4AQ8WYN0 RNU6-784P-201ENST00000384330 106 ntBASIC3.14□□□□□ -1.91
ATG4AQ8WYN0 SNORD116-20-201ENST00000384529 92 ntBASIC3.14□□□□□ -1.91
ATG4AQ8WYN0 AL138885.1-201ENST00000405921 675 ntBASIC3.14□□□□□ -1.91
ATG4AQ8WYN0 AP000275.1-201ENST00000411943 390 ntBASIC3.14□□□□□ -1.91
ATG4AQ8WYN0 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.14□□□□□ -1.91
ATG4AQ8WYN0 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.14□□□□□ -1.91
ATG4AQ8WYN0 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.14□□□□□ -1.91
ATG4AQ8WYN0 AC009969.1-201ENST00000438726 172 ntBASIC3.14□□□□□ -1.91
ATG4AQ8WYN0 CYCSP32-201ENST00000440548 321 ntBASIC3.14□□□□□ -1.91
ATG4AQ8WYN0 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.14□□□□□ -1.91
ATG4AQ8WYN0 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
ATG4AQ8WYN0 AC010099.1-201ENST00000455434 375 ntBASIC3.14□□□□□ -1.91
ATG4AQ8WYN0 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.14□□□□□ -1.91
ATG4AQ8WYN0 RNU6-1137P-201ENST00000517073 99 ntBASIC3.14□□□□□ -1.91
ATG4AQ8WYN0 Y_RNA.720-201ENST00000517166 92 ntBASIC3.14□□□□□ -1.91
ATG4AQ8WYN0 GNAI2P1-201ENST00000541815 315 ntBASIC3.14□□□□□ -1.91
ATG4AQ8WYN0 AC021739.1-201ENST00000559631 174 ntBASIC3.14□□□□□ -1.91
ATG4AQ8WYN0 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.14□□□□□ -1.91
ATG4AQ8WYN0 AC010653.1-201ENST00000571108 881 ntBASIC3.14□□□□□ -1.91
ATG4AQ8WYN0 AC009318.2-201ENST00000610917 651 ntBASIC3.14□□□□□ -1.91
ATG4AQ8WYN0 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
ATG4AQ8WYN0 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
ATG4AQ8WYN0 AC008264.2-201ENST00000610193 3731 ntBASIC3.14□□□□□ -1.91
ATG4AQ8WYN0 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.14□□□□□ -1.91
ATG4AQ8WYN0 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
ATG4AQ8WYN0 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.13□□□□□ -1.91
ATG4AQ8WYN0 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
ATG4AQ8WYN0 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
ATG4AQ8WYN0 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
ATG4AQ8WYN0 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.13□□□□□ -1.91
ATG4AQ8WYN0 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.13□□□□□ -1.91
ATG4AQ8WYN0 RNU6-99P-201ENST00000364721 107 ntBASIC3.13□□□□□ -1.91
ATG4AQ8WYN0 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.13□□□□□ -1.91
ATG4AQ8WYN0 SNORA70.4-201ENST00000365509 134 ntBASIC3.13□□□□□ -1.91
ATG4AQ8WYN0 Y_RNA.459-201ENST00000384251 102 ntBASIC3.13□□□□□ -1.91
ATG4AQ8WYN0 SNORD15B-201ENST00000384714 146 ntBASIC3.13□□□□□ -1.91
ATG4AQ8WYN0 FTH1P15-201ENST00000406984 280 ntBASIC3.13□□□□□ -1.91
ATG4AQ8WYN0 RNA5SP274-201ENST00000410484 108 ntBASIC3.13□□□□□ -1.91
ATG4AQ8WYN0 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.13□□□□□ -1.91
ATG4AQ8WYN0 AL591043.1-201ENST00000432461 424 ntBASIC3.13□□□□□ -1.91
ATG4AQ8WYN0 AC244505.4-201ENST00000434905 287 ntBASIC3.13□□□□□ -1.91
ATG4AQ8WYN0 AL714022.1-201ENST00000439897 151 ntBASIC3.13□□□□□ -1.91
ATG4AQ8WYN0 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.13□□□□□ -1.91
ATG4AQ8WYN0 SSXP5-201ENST00000443473 287 ntBASIC3.13□□□□□ -1.91
ATG4AQ8WYN0 PRSS3P4-201ENST00000453323 162 ntBASIC3.13□□□□□ -1.91
ATG4AQ8WYN0 AC079354.2-201ENST00000453523 154 ntBASIC3.13□□□□□ -1.91
ATG4AQ8WYN0 MTND5P22-201ENST00000458380 195 ntBASIC3.13□□□□□ -1.91
ATG4AQ8WYN0 snoU13.22-201ENST00000459428 104 ntBASIC3.13□□□□□ -1.91
ATG4AQ8WYN0 AC109925.1-201ENST00000478069 331 ntBASIC3.13□□□□□ -1.91
ATG4AQ8WYN0 MRPL42P6-201ENST00000486397 371 ntBASIC3.13□□□□□ -1.91
ATG4AQ8WYN0 AC105758.1-201ENST00000506038 399 ntBASIC3.13□□□□□ -1.91
ATG4AQ8WYN0 AC006199.1-201ENST00000548728 219 ntBASIC3.13□□□□□ -1.91
ATG4AQ8WYN0 CR383656.8-201ENST00000549046 145 ntBASIC3.13□□□□□ -1.91
ATG4AQ8WYN0 AP001836.1-201ENST00000604675 523 ntBASIC3.13□□□□□ -1.91
ATG4AQ8WYN0 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.13□□□□□ -1.91
ATG4AQ8WYN0 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.13□□□□□ -1.91
ATG4AQ8WYN0 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.13□□□□□ -1.91
ATG4AQ8WYN0 AC097372.5-201ENST00000623665 376 ntBASIC3.13□□□□□ -1.91
ATG4AQ8WYN0 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.13□□□□□ -1.91
ATG4AQ8WYN0 AC241585.2-209ENST00000638217 143 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms