Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 AL353743.1-202ENST00000431724 1695 ntBASIC3.4□□□□□ -1.86
CCHCR1Q8TD31 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
CCHCR1Q8TD31 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.4□□□□□ -1.87
CCHCR1Q8TD31 RNY1P16-201ENST00000363063 111 ntBASIC3.4□□□□□ -1.87
CCHCR1Q8TD31 RNA5SP197-201ENST00000363357 119 ntBASIC3.4□□□□□ -1.87
CCHCR1Q8TD31 RNU6-784P-201ENST00000384330 106 ntBASIC3.4□□□□□ -1.87
CCHCR1Q8TD31 Y_RNA.577-201ENST00000384794 101 ntBASIC3.4□□□□□ -1.87
CCHCR1Q8TD31 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
CCHCR1Q8TD31 AL138885.1-201ENST00000405921 675 ntBASIC3.4□□□□□ -1.87
CCHCR1Q8TD31 FTH1P15-201ENST00000406984 280 ntBASIC3.4□□□□□ -1.87
CCHCR1Q8TD31 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.4□□□□□ -1.87
CCHCR1Q8TD31 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.4□□□□□ -1.87
CCHCR1Q8TD31 AC005300.1-201ENST00000428401 373 ntBASIC3.4□□□□□ -1.87
CCHCR1Q8TD31 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.4□□□□□ -1.87
CCHCR1Q8TD31 AC079354.2-201ENST00000453523 154 ntBASIC3.4□□□□□ -1.87
CCHCR1Q8TD31 RPS26P21-201ENST00000475397 348 ntBASIC3.4□□□□□ -1.87
CCHCR1Q8TD31 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.4□□□□□ -1.87
CCHCR1Q8TD31 RN7SKP282-201ENST00000516824 299 ntBASIC3.4□□□□□ -1.87
CCHCR1Q8TD31 SCARNA20.6-201ENST00000517251 106 ntBASIC3.4□□□□□ -1.87
CCHCR1Q8TD31 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.4□□□□□ -1.87
CCHCR1Q8TD31 MIR5701-3-201ENST00000578890 82 ntBASIC3.4□□□□□ -1.87
CCHCR1Q8TD31 MIR4680-201ENST00000580906 66 ntBASIC3.4□□□□□ -1.87
CCHCR1Q8TD31 MIR5701-1-201ENST00000585138 82 ntBASIC3.4□□□□□ -1.87
CCHCR1Q8TD31 AC008737.2-201ENST00000599446 118 ntBASIC3.4□□□□□ -1.87
CCHCR1Q8TD31 AC136443.5-201ENST00000603741 370 ntBASIC3.4□□□□□ -1.87
CCHCR1Q8TD31 AP001836.1-201ENST00000604675 523 ntBASIC3.4□□□□□ -1.87
CCHCR1Q8TD31 MIR5701-2-201ENST00000615634 82 ntBASIC3.4□□□□□ -1.87
CCHCR1Q8TD31 AC012314.7-201ENST00000619693 93 ntBASIC3.4□□□□□ -1.87
CCHCR1Q8TD31 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.4□□□□□ -1.87
CCHCR1Q8TD31 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.4□□□□□ -1.87
CCHCR1Q8TD31 AL049781.1-201ENST00000623195 3585 ntBASIC3.4□□□□□ -1.87
CCHCR1Q8TD31 ZNF299P-201ENST00000406845 1804 ntBASIC3.4□□□□□ -1.87
CCHCR1Q8TD31 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CCHCR1Q8TD31 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.39□□□□□ -1.87
CCHCR1Q8TD31 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CCHCR1Q8TD31 GABRG2-229ENST00000641017 3628 ntBASIC3.39□□□□□ -1.87
CCHCR1Q8TD31 SNORA71.3-201ENST00000362582 128 ntBASIC3.39□□□□□ -1.87
CCHCR1Q8TD31 Y_RNA.80-201ENST00000362996 102 ntBASIC3.39□□□□□ -1.87
CCHCR1Q8TD31 RNU6-595P-201ENST00000363944 107 ntBASIC3.39□□□□□ -1.87
CCHCR1Q8TD31 Y_RNA.364-201ENST00000365532 101 ntBASIC3.39□□□□□ -1.87
CCHCR1Q8TD31 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CCHCR1Q8TD31 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CCHCR1Q8TD31 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.39□□□□□ -1.87
CCHCR1Q8TD31 RNU6-1077P-201ENST00000410506 102 ntBASIC3.39□□□□□ -1.87
CCHCR1Q8TD31 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.39□□□□□ -1.87
CCHCR1Q8TD31 AC113618.1-201ENST00000416747 285 ntBASIC3.39□□□□□ -1.87
CCHCR1Q8TD31 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.39□□□□□ -1.87
CCHCR1Q8TD31 AL353997.1-201ENST00000432936 108 ntBASIC3.39□□□□□ -1.87
CCHCR1Q8TD31 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CCHCR1Q8TD31 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.39□□□□□ -1.87
CCHCR1Q8TD31 AL358232.1-201ENST00000448030 501 ntBASIC3.39□□□□□ -1.87
CCHCR1Q8TD31 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CCHCR1Q8TD31 PRSS3P4-201ENST00000453323 162 ntBASIC3.39□□□□□ -1.87
CCHCR1Q8TD31 RN7SL75P-201ENST00000461926 281 ntBASIC3.39□□□□□ -1.87
CCHCR1Q8TD31 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.39□□□□□ -1.87
CCHCR1Q8TD31 RPL23AP49-201ENST00000492925 468 ntBASIC3.39□□□□□ -1.87
CCHCR1Q8TD31 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.39□□□□□ -1.87
CCHCR1Q8TD31 RNU1-143P-201ENST00000516296 146 ntBASIC3.39□□□□□ -1.87
CCHCR1Q8TD31 AP000867.2-201ENST00000532468 320 ntBASIC3.39□□□□□ -1.87
CCHCR1Q8TD31 AC007458.1-201ENST00000542812 373 ntBASIC3.39□□□□□ -1.87
CCHCR1Q8TD31 AC006199.1-201ENST00000548728 219 ntBASIC3.39□□□□□ -1.87
CCHCR1Q8TD31 DNAJC8P1-201ENST00000554535 372 ntBASIC3.39□□□□□ -1.87
CCHCR1Q8TD31 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.39□□□□□ -1.87
CCHCR1Q8TD31 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.39□□□□□ -1.87
CCHCR1Q8TD31 U1.23-201ENST00000610293 146 ntBASIC3.39□□□□□ -1.87
CCHCR1Q8TD31 RNU1-68P-201ENST00000615382 146 ntBASIC3.39□□□□□ -1.87
CCHCR1Q8TD31 U1.39-201ENST00000621562 146 ntBASIC3.39□□□□□ -1.87
CCHCR1Q8TD31 AC241585.2-209ENST00000638217 143 ntBASIC3.39□□□□□ -1.87
CCHCR1Q8TD31 RNU6-527P-201ENST00000363425 104 ntBASIC3.38□□□□□ -1.87
CCHCR1Q8TD31 RNA5SP72-201ENST00000364442 117 ntBASIC3.38□□□□□ -1.87
CCHCR1Q8TD31 RNU6-1280P-201ENST00000365211 107 ntBASIC3.38□□□□□ -1.87
CCHCR1Q8TD31 MIR490-201ENST00000384865 128 ntBASIC3.38□□□□□ -1.87
CCHCR1Q8TD31 MIR183-201ENST00000384958 110 ntBASIC3.38□□□□□ -1.87
CCHCR1Q8TD31 RNA5SP171-201ENST00000391071 115 ntBASIC3.38□□□□□ -1.87
CCHCR1Q8TD31 MIR887-201ENST00000401258 79 ntBASIC3.38□□□□□ -1.87
CCHCR1Q8TD31 RNU6-985P-201ENST00000410182 104 ntBASIC3.38□□□□□ -1.87
CCHCR1Q8TD31 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.38□□□□□ -1.87
CCHCR1Q8TD31 AC243964.1-201ENST00000441814 261 ntBASIC3.38□□□□□ -1.87
CCHCR1Q8TD31 AC124916.1-201ENST00000444020 547 ntBASIC3.38□□□□□ -1.87
CCHCR1Q8TD31 MRPL42P6-201ENST00000486397 371 ntBASIC3.38□□□□□ -1.87
CCHCR1Q8TD31 Y_RNA.720-201ENST00000517166 92 ntBASIC3.38□□□□□ -1.87
CCHCR1Q8TD31 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.38□□□□□ -1.87
CCHCR1Q8TD31 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.38□□□□□ -1.87
CCHCR1Q8TD31 AC007536.1-201ENST00000533382 349 ntBASIC3.38□□□□□ -1.87
CCHCR1Q8TD31 GNAI2P1-201ENST00000541815 315 ntBASIC3.38□□□□□ -1.87
CCHCR1Q8TD31 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.38□□□□□ -1.87
CCHCR1Q8TD31 AC092447.9-201ENST00000603395 144 ntBASIC3.38□□□□□ -1.87
CCHCR1Q8TD31 HMGB1P24-202ENST00000615653 685 ntBASIC3.38□□□□□ -1.87
CCHCR1Q8TD31 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.38□□□□□ -1.87
CCHCR1Q8TD31 U6.105-201ENST00000637379 88 ntBASIC3.38□□□□□ -1.87
CCHCR1Q8TD31 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCHCR1Q8TD31 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.37□□□□□ -1.87
CCHCR1Q8TD31 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCHCR1Q8TD31 RNU1-33P-201ENST00000364249 162 ntBASIC3.37□□□□□ -1.87
CCHCR1Q8TD31 RNU6-99P-201ENST00000364721 107 ntBASIC3.37□□□□□ -1.87
CCHCR1Q8TD31 SNORD116-20-201ENST00000384529 92 ntBASIC3.37□□□□□ -1.87
CCHCR1Q8TD31 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
CCHCR1Q8TD31 RNA5SP229-201ENST00000410809 99 ntBASIC3.37□□□□□ -1.87
CCHCR1Q8TD31 AC023141.4-201ENST00000412031 328 ntBASIC3.37□□□□□ -1.87
CCHCR1Q8TD31 AC074117.2-201ENST00000417130 397 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms