Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 HMGB3P8-201ENST00000449709 577 ntBASIC3.67□□□□□ -1.82
NUP43Q8NFH3 Y_RNA.650-201ENST00000459002 102 ntBASIC3.67□□□□□ -1.82
NUP43Q8NFH3 AC117440.1-201ENST00000474107 571 ntBASIC3.67□□□□□ -1.82
NUP43Q8NFH3 RPS4XP22-201ENST00000480755 780 ntBASIC3.67□□□□□ -1.82
NUP43Q8NFH3 RNU2-58P-201ENST00000516403 183 ntBASIC3.67□□□□□ -1.82
NUP43Q8NFH3 Y_RNA.777-201ENST00000516982 102 ntBASIC3.67□□□□□ -1.82
NUP43Q8NFH3 AL391261.3-201ENST00000557194 520 ntBASIC3.67□□□□□ -1.82
NUP43Q8NFH3 MIR4429-201ENST00000580105 73 ntBASIC3.67□□□□□ -1.82
NUP43Q8NFH3 Y_RNA.771-201ENST00000598668 102 ntBASIC3.67□□□□□ -1.82
NUP43Q8NFH3 AC072026.1-201ENST00000605023 201 ntBASIC3.67□□□□□ -1.82
NUP43Q8NFH3 Y_RNA.789-201ENST00000622480 102 ntBASIC3.67□□□□□ -1.82
NUP43Q8NFH3 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NUP43Q8NFH3 USP8P1-201ENST00000494673 3183 ntBASIC3.67□□□□□ -1.82
NUP43Q8NFH3 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.66□□□□□ -1.82
NUP43Q8NFH3 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NUP43Q8NFH3 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.66□□□□□ -1.82
NUP43Q8NFH3 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NUP43Q8NFH3 AC135776.4-201ENST00000624300 1904 ntBASIC3.66□□□□□ -1.82
NUP43Q8NFH3 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
NUP43Q8NFH3 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NUP43Q8NFH3 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.66□□□□□ -1.82
NUP43Q8NFH3 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NUP43Q8NFH3 RNA5SP197-201ENST00000363357 119 ntBASIC3.66□□□□□ -1.82
NUP43Q8NFH3 SNORD115-8-201ENST00000363856 82 ntBASIC3.66□□□□□ -1.82
NUP43Q8NFH3 Y_RNA.230-201ENST00000364348 109 ntBASIC3.66□□□□□ -1.82
NUP43Q8NFH3 SNORD115-38-201ENST00000365037 82 ntBASIC3.66□□□□□ -1.82
NUP43Q8NFH3 SNORD113-1-201ENST00000365321 69 ntBASIC3.66□□□□□ -1.82
NUP43Q8NFH3 Y_RNA.418-201ENST00000384029 102 ntBASIC3.66□□□□□ -1.82
NUP43Q8NFH3 SNORA36A-201ENST00000384221 132 ntBASIC3.66□□□□□ -1.82
NUP43Q8NFH3 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.66□□□□□ -1.82
NUP43Q8NFH3 PPIAP31-201ENST00000405422 495 ntBASIC3.66□□□□□ -1.82
NUP43Q8NFH3 Y_RNA.590-201ENST00000410140 107 ntBASIC3.66□□□□□ -1.82
NUP43Q8NFH3 RNU2-61P-201ENST00000411069 191 ntBASIC3.66□□□□□ -1.82
NUP43Q8NFH3 VDAC1P3-201ENST00000434069 851 ntBASIC3.66□□□□□ -1.82
NUP43Q8NFH3 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.66□□□□□ -1.82
NUP43Q8NFH3 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.66□□□□□ -1.82
NUP43Q8NFH3 snoU13.22-201ENST00000459428 104 ntBASIC3.66□□□□□ -1.82
NUP43Q8NFH3 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.66□□□□□ -1.82
NUP43Q8NFH3 AC091959.1-201ENST00000495857 238 ntBASIC3.66□□□□□ -1.82
NUP43Q8NFH3 VWA8P1-201ENST00000510889 176 ntBASIC3.66□□□□□ -1.82
NUP43Q8NFH3 SNORA31.23-201ENST00000517219 133 ntBASIC3.66□□□□□ -1.82
NUP43Q8NFH3 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.66□□□□□ -1.82
NUP43Q8NFH3 YPEL5P3-201ENST00000547227 352 ntBASIC3.66□□□□□ -1.82
NUP43Q8NFH3 HSPE1P4-201ENST00000550617 308 ntBASIC3.66□□□□□ -1.82
NUP43Q8NFH3 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.66□□□□□ -1.82
NUP43Q8NFH3 KLKP1-201ENST00000595979 403 ntBASIC3.66□□□□□ -1.82
NUP43Q8NFH3 uc_338.32-201ENST00000615087 172 ntBASIC3.66□□□□□ -1.82
NUP43Q8NFH3 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
NUP43Q8NFH3 RNA5SP196-201ENST00000625967 102 ntBASIC3.66□□□□□ -1.82
NUP43Q8NFH3 AC021753.1-201ENST00000635724 168 ntBASIC3.66□□□□□ -1.82
NUP43Q8NFH3 IGHVIII-44-202ENST00000636235 289 ntBASIC3.66□□□□□ -1.82
NUP43Q8NFH3 MAPK10-373ENST00000641983 6772 ntBASIC3.66□□□□□ -1.82
NUP43Q8NFH3 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.66□□□□□ -1.82
NUP43Q8NFH3 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NUP43Q8NFH3 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.65□□□□□ -1.82
NUP43Q8NFH3 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
NUP43Q8NFH3 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.65□□□□□ -1.82
NUP43Q8NFH3 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.65□□□□□ -1.82
NUP43Q8NFH3 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.65□□□□□ -1.82
NUP43Q8NFH3 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.83
NUP43Q8NFH3 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
NUP43Q8NFH3 MIR410-201ENST00000362222 80 ntBASIC3.65□□□□□ -1.83
NUP43Q8NFH3 Y_RNA.136-201ENST00000363444 102 ntBASIC3.65□□□□□ -1.83
NUP43Q8NFH3 Y_RNA.170-201ENST00000363746 110 ntBASIC3.65□□□□□ -1.83
NUP43Q8NFH3 RNU6-1141P-201ENST00000364520 107 ntBASIC3.65□□□□□ -1.83
NUP43Q8NFH3 RNU6-1175P-201ENST00000365200 107 ntBASIC3.65□□□□□ -1.83
NUP43Q8NFH3 MIR544A-201ENST00000384855 91 ntBASIC3.65□□□□□ -1.83
NUP43Q8NFH3 RN7SKP61-201ENST00000410642 295 ntBASIC3.65□□□□□ -1.83
NUP43Q8NFH3 RN7SKP51-201ENST00000410781 304 ntBASIC3.65□□□□□ -1.83
NUP43Q8NFH3 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
NUP43Q8NFH3 MTCO1P5-201ENST00000433573 344 ntBASIC3.65□□□□□ -1.83
NUP43Q8NFH3 GPM6BP3-201ENST00000442797 145 ntBASIC3.65□□□□□ -1.83
NUP43Q8NFH3 AL500522.2-201ENST00000448562 343 ntBASIC3.65□□□□□ -1.83
NUP43Q8NFH3 SNRPGP7-201ENST00000469016 106 ntBASIC3.65□□□□□ -1.83
NUP43Q8NFH3 AC109925.1-201ENST00000478069 331 ntBASIC3.65□□□□□ -1.83
NUP43Q8NFH3 PPIAP15-201ENST00000479662 484 ntBASIC3.65□□□□□ -1.83
NUP43Q8NFH3 RPS27AP10-201ENST00000496103 208 ntBASIC3.65□□□□□ -1.83
NUP43Q8NFH3 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC3.65□□□□□ -1.83
NUP43Q8NFH3 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.65□□□□□ -1.83
NUP43Q8NFH3 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.65□□□□□ -1.83
NUP43Q8NFH3 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.65□□□□□ -1.83
NUP43Q8NFH3 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.65□□□□□ -1.83
NUP43Q8NFH3 AC008749.1-201ENST00000597650 306 ntBASIC3.65□□□□□ -1.83
NUP43Q8NFH3 AC132825.6-201ENST00000638861 357 ntBASIC3.65□□□□□ -1.83
NUP43Q8NFH3 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
NUP43Q8NFH3 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
NUP43Q8NFH3 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.65□□□□□ -1.83
NUP43Q8NFH3 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
NUP43Q8NFH3 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
NUP43Q8NFH3 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
NUP43Q8NFH3 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
NUP43Q8NFH3 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
NUP43Q8NFH3 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NUP43Q8NFH3 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NUP43Q8NFH3 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NUP43Q8NFH3 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NUP43Q8NFH3 RNA5SP97-201ENST00000365006 84 ntBASIC3.64□□□□□ -1.83
NUP43Q8NFH3 RNA5SP317-201ENST00000410176 116 ntBASIC3.64□□□□□ -1.83
NUP43Q8NFH3 RNA5SP311-201ENST00000411290 116 ntBASIC3.64□□□□□ -1.83
NUP43Q8NFH3 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms