Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 RNU1-86P-201ENST00000516108 154 ntBASIC3.38□□□□□ -1.87
SIMC1Q8NDZ2 RNU1-107P-201ENST00000516617 154 ntBASIC3.38□□□□□ -1.87
SIMC1Q8NDZ2 AC084851.1-201ENST00000529105 249 ntBASIC3.38□□□□□ -1.87
SIMC1Q8NDZ2 TRAV32-201ENST00000553993 340 ntBASIC3.38□□□□□ -1.87
SIMC1Q8NDZ2 AL157871.3-201ENST00000557231 293 ntBASIC3.38□□□□□ -1.87
SIMC1Q8NDZ2 TGIF1P1-201ENST00000558095 802 ntBASIC3.38□□□□□ -1.87
SIMC1Q8NDZ2 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.38□□□□□ -1.87
SIMC1Q8NDZ2 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.38□□□□□ -1.87
SIMC1Q8NDZ2 AC006600.1-201ENST00000572529 153 ntBASIC3.38□□□□□ -1.87
SIMC1Q8NDZ2 CPDP1-201ENST00000579660 283 ntBASIC3.38□□□□□ -1.87
SIMC1Q8NDZ2 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.38□□□□□ -1.87
SIMC1Q8NDZ2 RAC1P9-201ENST00000604990 392 ntBASIC3.38□□□□□ -1.87
SIMC1Q8NDZ2 AC123912.5-201ENST00000605470 343 ntBASIC3.38□□□□□ -1.87
SIMC1Q8NDZ2 MIR3976-201ENST00000606807 139 ntBASIC3.38□□□□□ -1.87
SIMC1Q8NDZ2 AC107294.3-201ENST00000609211 526 ntBASIC3.38□□□□□ -1.87
SIMC1Q8NDZ2 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.38□□□□□ -1.87
SIMC1Q8NDZ2 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.37□□□□□ -1.87
SIMC1Q8NDZ2 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
SIMC1Q8NDZ2 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SIMC1Q8NDZ2 RNU1-75P-201ENST00000347264 129 ntBASIC3.37□□□□□ -1.87
SIMC1Q8NDZ2 SNORD9-201ENST00000362566 104 ntBASIC3.37□□□□□ -1.87
SIMC1Q8NDZ2 Y_RNA.33-201ENST00000362591 102 ntBASIC3.37□□□□□ -1.87
SIMC1Q8NDZ2 Y_RNA.64-201ENST00000362845 102 ntBASIC3.37□□□□□ -1.87
SIMC1Q8NDZ2 RNA5SP42-201ENST00000364278 115 ntBASIC3.37□□□□□ -1.87
SIMC1Q8NDZ2 RNU6-209P-201ENST00000384118 107 ntBASIC3.37□□□□□ -1.87
SIMC1Q8NDZ2 MIR767-201ENST00000390228 109 ntBASIC3.37□□□□□ -1.87
SIMC1Q8NDZ2 RNU2-38P-201ENST00000410856 79 ntBASIC3.37□□□□□ -1.87
SIMC1Q8NDZ2 AC125238.1-201ENST00000448842 249 ntBASIC3.37□□□□□ -1.87
SIMC1Q8NDZ2 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.37□□□□□ -1.87
SIMC1Q8NDZ2 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.37□□□□□ -1.87
SIMC1Q8NDZ2 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.37□□□□□ -1.87
SIMC1Q8NDZ2 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.37□□□□□ -1.87
SIMC1Q8NDZ2 RNU1-103P-201ENST00000516502 125 ntBASIC3.37□□□□□ -1.87
SIMC1Q8NDZ2 Y_RNA.687-201ENST00000516558 91 ntBASIC3.37□□□□□ -1.87
SIMC1Q8NDZ2 RNU7-4P-201ENST00000516961 62 ntBASIC3.37□□□□□ -1.87
SIMC1Q8NDZ2 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.37□□□□□ -1.87
SIMC1Q8NDZ2 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.37□□□□□ -1.87
SIMC1Q8NDZ2 HSPE1P20-201ENST00000538133 289 ntBASIC3.37□□□□□ -1.87
SIMC1Q8NDZ2 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.37□□□□□ -1.87
SIMC1Q8NDZ2 VN1R91P-201ENST00000594377 169 ntBASIC3.37□□□□□ -1.87
SIMC1Q8NDZ2 AC006077.1-201ENST00000604746 343 ntBASIC3.37□□□□□ -1.87
SIMC1Q8NDZ2 AC141273.2-201ENST00000618989 130 ntBASIC3.37□□□□□ -1.87
SIMC1Q8NDZ2 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.37□□□□□ -1.87
SIMC1Q8NDZ2 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.37□□□□□ -1.87
SIMC1Q8NDZ2 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SIMC1Q8NDZ2 AC099654.7-201ENST00000635788 2127 ntBASIC3.37□□□□□ -1.87
SIMC1Q8NDZ2 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SIMC1Q8NDZ2 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.36□□□□□ -1.87
SIMC1Q8NDZ2 OR56A5-201ENST00000340110 738 ntBASIC3.36□□□□□ -1.87
SIMC1Q8NDZ2 Y_RNA.14-201ENST00000362415 103 ntBASIC3.36□□□□□ -1.87
SIMC1Q8NDZ2 Y_RNA.60-201ENST00000362831 98 ntBASIC3.36□□□□□ -1.87
SIMC1Q8NDZ2 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.36□□□□□ -1.87
SIMC1Q8NDZ2 MIR183-201ENST00000384958 110 ntBASIC3.36□□□□□ -1.87
SIMC1Q8NDZ2 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.36□□□□□ -1.87
SIMC1Q8NDZ2 RPS3AP46-201ENST00000448352 682 ntBASIC3.36□□□□□ -1.87
SIMC1Q8NDZ2 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.36□□□□□ -1.87
SIMC1Q8NDZ2 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.36□□□□□ -1.87
SIMC1Q8NDZ2 AC022493.1-201ENST00000492984 337 ntBASIC3.36□□□□□ -1.87
SIMC1Q8NDZ2 AC104619.4-201ENST00000510773 249 ntBASIC3.36□□□□□ -1.87
SIMC1Q8NDZ2 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.36□□□□□ -1.87
SIMC1Q8NDZ2 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.36□□□□□ -1.87
SIMC1Q8NDZ2 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
SIMC1Q8NDZ2 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.36□□□□□ -1.87
SIMC1Q8NDZ2 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.36□□□□□ -1.87
SIMC1Q8NDZ2 AC007375.1-201ENST00000554513 578 ntBASIC3.36□□□□□ -1.87
SIMC1Q8NDZ2 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.36□□□□□ -1.87
SIMC1Q8NDZ2 AC090517.1-201ENST00000569307 266 ntBASIC3.36□□□□□ -1.87
SIMC1Q8NDZ2 AC011471.1-201ENST00000585766 187 ntBASIC3.36□□□□□ -1.87
SIMC1Q8NDZ2 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.36□□□□□ -1.87
SIMC1Q8NDZ2 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.36□□□□□ -1.87
SIMC1Q8NDZ2 MIR1244-1-201ENST00000612829 85 ntBASIC3.36□□□□□ -1.87
SIMC1Q8NDZ2 MIR1244-3-201ENST00000635744 85 ntBASIC3.36□□□□□ -1.87
SIMC1Q8NDZ2 MIR1244-2-201ENST00000636449 85 ntBASIC3.36□□□□□ -1.87
SIMC1Q8NDZ2 MIR1244-4-202ENST00000636813 85 ntBASIC3.36□□□□□ -1.87
SIMC1Q8NDZ2 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
SIMC1Q8NDZ2 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.36□□□□□ -1.87
SIMC1Q8NDZ2 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.36□□□□□ -1.87
SIMC1Q8NDZ2 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.35□□□□□ -1.87
SIMC1Q8NDZ2 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SIMC1Q8NDZ2 AC007496.3-201ENST00000624987 3443 ntBASIC3.35□□□□□ -1.87
SIMC1Q8NDZ2 MAPK10-322ENST00000641485 4530 ntBASIC3.35□□□□□ -1.87
SIMC1Q8NDZ2 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.35□□□□□ -1.87
SIMC1Q8NDZ2 RNU6-770P-201ENST00000363929 105 ntBASIC3.35□□□□□ -1.87
SIMC1Q8NDZ2 AP002088.1-201ENST00000382740 395 ntBASIC3.35□□□□□ -1.87
SIMC1Q8NDZ2 CD24P4-201ENST00000382840 243 ntBASIC3.35□□□□□ -1.87
SIMC1Q8NDZ2 Y_RNA.533-201ENST00000384596 114 ntBASIC3.35□□□□□ -1.87
SIMC1Q8NDZ2 Y_RNA.562-201ENST00000384695 113 ntBASIC3.35□□□□□ -1.87
SIMC1Q8NDZ2 MIR625-201ENST00000385047 85 ntBASIC3.35□□□□□ -1.87
SIMC1Q8NDZ2 SNORA48.8-201ENST00000391324 134 ntBASIC3.35□□□□□ -1.87
SIMC1Q8NDZ2 AL513475.1-201ENST00000406602 315 ntBASIC3.35□□□□□ -1.87
SIMC1Q8NDZ2 RNU6-1025P-201ENST00000410629 104 ntBASIC3.35□□□□□ -1.87
SIMC1Q8NDZ2 AC245291.1-201ENST00000419501 328 ntBASIC3.35□□□□□ -1.87
SIMC1Q8NDZ2 BX679664.1-201ENST00000434429 253 ntBASIC3.35□□□□□ -1.87
SIMC1Q8NDZ2 FCF1P4-201ENST00000448326 183 ntBASIC3.35□□□□□ -1.87
SIMC1Q8NDZ2 AC006483.1-201ENST00000487308 313 ntBASIC3.35□□□□□ -1.87
SIMC1Q8NDZ2 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.35□□□□□ -1.87
SIMC1Q8NDZ2 RNU6-1023P-201ENST00000516137 106 ntBASIC3.35□□□□□ -1.87
SIMC1Q8NDZ2 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.35□□□□□ -1.87
SIMC1Q8NDZ2 MIR4782-201ENST00000577987 79 ntBASIC3.35□□□□□ -1.87
SIMC1Q8NDZ2 AL158827.2-201ENST00000602494 330 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms