Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 AC098657.3-201ENST00000620434 263 ntBASIC2.14□□□□□ -2.07
CCDC197Q8NCU1 AC068137.3-201ENST00000639191 341 ntBASIC2.14□□□□□ -2.07
CCDC197Q8NCU1 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.14□□□□□ -2.07
CCDC197Q8NCU1 AL365361.1-201ENST00000566942 3481 ntBASIC2.13□□□□□ -2.07
CCDC197Q8NCU1 RNU6-1210P-201ENST00000363775 107 ntBASIC2.13□□□□□ -2.07
CCDC197Q8NCU1 RNU4-66P-201ENST00000365199 138 ntBASIC2.13□□□□□ -2.07
CCDC197Q8NCU1 SNORA48.3-201ENST00000391081 134 ntBASIC2.13□□□□□ -2.07
CCDC197Q8NCU1 RPL17P50-201ENST00000396131 546 ntBASIC2.13□□□□□ -2.07
CCDC197Q8NCU1 RPS29P13-201ENST00000402041 169 ntBASIC2.13□□□□□ -2.07
CCDC197Q8NCU1 POLHP1-201ENST00000411806 470 ntBASIC2.13□□□□□ -2.07
CCDC197Q8NCU1 AIMP1P2-201ENST00000425294 312 ntBASIC2.13□□□□□ -2.07
CCDC197Q8NCU1 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.13□□□□□ -2.07
CCDC197Q8NCU1 AC105272.1-201ENST00000438604 198 ntBASIC2.13□□□□□ -2.07
CCDC197Q8NCU1 AL161788.1-201ENST00000441805 169 ntBASIC2.13□□□□□ -2.07
CCDC197Q8NCU1 MTND3P16-201ENST00000452205 344 ntBASIC2.13□□□□□ -2.07
CCDC197Q8NCU1 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.13□□□□□ -2.07
CCDC197Q8NCU1 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.13□□□□□ -2.07
CCDC197Q8NCU1 RN7SL274P-201ENST00000492268 272 ntBASIC2.13□□□□□ -2.07
CCDC197Q8NCU1 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.13□□□□□ -2.07
CCDC197Q8NCU1 Y_RNA.655-201ENST00000515919 96 ntBASIC2.13□□□□□ -2.07
CCDC197Q8NCU1 SNORA14.1-201ENST00000516113 141 ntBASIC2.13□□□□□ -2.07
CCDC197Q8NCU1 RNU6-189P-201ENST00000516120 101 ntBASIC2.13□□□□□ -2.07
CCDC197Q8NCU1 Y_RNA.704-201ENST00000516851 102 ntBASIC2.13□□□□□ -2.07
CCDC197Q8NCU1 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.13□□□□□ -2.07
CCDC197Q8NCU1 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.13□□□□□ -2.07
CCDC197Q8NCU1 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.13□□□□□ -2.07
CCDC197Q8NCU1 MIR3158-1-201ENST00000583596 81 ntBASIC2.13□□□□□ -2.07
CCDC197Q8NCU1 VN1R107P-201ENST00000601784 209 ntBASIC2.13□□□□□ -2.07
CCDC197Q8NCU1 AC103705.1-201ENST00000619013 241 ntBASIC2.13□□□□□ -2.07
CCDC197Q8NCU1 YWHAEP7-203ENST00000622054 312 ntBASIC2.13□□□□□ -2.07
CCDC197Q8NCU1 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.13□□□□□ -2.07
CCDC197Q8NCU1 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.13□□□□□ -2.07
CCDC197Q8NCU1 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.13□□□□□ -2.07
CCDC197Q8NCU1 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC2.12□□□□□ -2.07
CCDC197Q8NCU1 Y_RNA.3-201ENST00000362331 103 ntBASIC2.12□□□□□ -2.07
CCDC197Q8NCU1 RNU6-212P-201ENST00000362642 104 ntBASIC2.12□□□□□ -2.07
CCDC197Q8NCU1 RNU6-655P-201ENST00000362858 107 ntBASIC2.12□□□□□ -2.07
CCDC197Q8NCU1 Y_RNA.167-201ENST00000363735 109 ntBASIC2.12□□□□□ -2.07
CCDC197Q8NCU1 RNA5SP240-201ENST00000365355 128 ntBASIC2.12□□□□□ -2.07
CCDC197Q8NCU1 Y_RNA.378-201ENST00000365652 113 ntBASIC2.12□□□□□ -2.07
CCDC197Q8NCU1 RNU6-483P-201ENST00000384088 108 ntBASIC2.12□□□□□ -2.07
CCDC197Q8NCU1 SUMO2P12-201ENST00000405924 140 ntBASIC2.12□□□□□ -2.07
CCDC197Q8NCU1 RNU6-908P-201ENST00000410160 94 ntBASIC2.12□□□□□ -2.07
CCDC197Q8NCU1 RNU2-63P-201ENST00000410792 194 ntBASIC2.12□□□□□ -2.07
CCDC197Q8NCU1 RNU2-40P-201ENST00000410833 196 ntBASIC2.12□□□□□ -2.07
CCDC197Q8NCU1 ARL5AP4-201ENST00000430731 512 ntBASIC2.12□□□□□ -2.07
CCDC197Q8NCU1 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.12□□□□□ -2.07
CCDC197Q8NCU1 SEPT14P3-201ENST00000439401 183 ntBASIC2.12□□□□□ -2.07
CCDC197Q8NCU1 AC243964.1-201ENST00000441814 261 ntBASIC2.12□□□□□ -2.07
CCDC197Q8NCU1 USP9YP8-201ENST00000441913 500 ntBASIC2.12□□□□□ -2.07
CCDC197Q8NCU1 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.12□□□□□ -2.07
CCDC197Q8NCU1 AL732372.2-207ENST00000445840 183 ntBASIC2.12□□□□□ -2.07
CCDC197Q8NCU1 SEPT14P2-201ENST00000453405 183 ntBASIC2.12□□□□□ -2.07
CCDC197Q8NCU1 CYP2C59P-201ENST00000457790 269 ntBASIC2.12□□□□□ -2.07
CCDC197Q8NCU1 SNORA84-201ENST00000459229 133 ntBASIC2.12□□□□□ -2.07
CCDC197Q8NCU1 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.12□□□□□ -2.07
CCDC197Q8NCU1 Y_RNA.654-201ENST00000497848 106 ntBASIC2.12□□□□□ -2.07
CCDC197Q8NCU1 AC091435.1-201ENST00000505442 584 ntBASIC2.12□□□□□ -2.07
CCDC197Q8NCU1 AC091885.1-201ENST00000506658 268 ntBASIC2.12□□□□□ -2.07
CCDC197Q8NCU1 AC074250.1-201ENST00000511117 192 ntBASIC2.12□□□□□ -2.07
CCDC197Q8NCU1 SEPT14P4-201ENST00000513445 186 ntBASIC2.12□□□□□ -2.07
CCDC197Q8NCU1 RNU6-1281P-201ENST00000516223 105 ntBASIC2.12□□□□□ -2.07
CCDC197Q8NCU1 RNA5SP24-201ENST00000516478 95 ntBASIC2.12□□□□□ -2.07
CCDC197Q8NCU1 SNORA48.11-201ENST00000517015 89 ntBASIC2.12□□□□□ -2.07
CCDC197Q8NCU1 FO082796.1-201ENST00000523795 183 ntBASIC2.12□□□□□ -2.07
CCDC197Q8NCU1 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.12□□□□□ -2.07
CCDC197Q8NCU1 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.12□□□□□ -2.07
CCDC197Q8NCU1 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.12□□□□□ -2.07
CCDC197Q8NCU1 IMMP1LP2-201ENST00000552954 492 ntBASIC2.12□□□□□ -2.07
CCDC197Q8NCU1 AC027807.1-201ENST00000559921 996 ntBASIC2.12□□□□□ -2.07
CCDC197Q8NCU1 AC091135.1-201ENST00000585943 307 ntBASIC2.12□□□□□ -2.07
CCDC197Q8NCU1 BNIP3P16-201ENST00000589779 534 ntBASIC2.12□□□□□ -2.07
CCDC197Q8NCU1 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.12□□□□□ -2.07
CCDC197Q8NCU1 AC092747.3-201ENST00000603769 301 ntBASIC2.12□□□□□ -2.07
CCDC197Q8NCU1 AC006023.1-201ENST00000603944 259 ntBASIC2.12□□□□□ -2.07
CCDC197Q8NCU1 RNU6-85P-201ENST00000605989 107 ntBASIC2.12□□□□□ -2.07
CCDC197Q8NCU1 AC093732.2-201ENST00000607950 274 ntBASIC2.12□□□□□ -2.07
CCDC197Q8NCU1 AC046143.2-201ENST00000609789 160 ntBASIC2.12□□□□□ -2.07
CCDC197Q8NCU1 AC007792.1-201ENST00000623023 402 ntBASIC2.12□□□□□ -2.07
CCDC197Q8NCU1 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.12□□□□□ -2.07
CCDC197Q8NCU1 MIR203B-201ENST00000636080 86 ntBASIC2.12□□□□□ -2.07
CCDC197Q8NCU1 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.11□□□□□ -2.07
CCDC197Q8NCU1 SNORA6-201ENST00000384033 151 ntBASIC2.11□□□□□ -2.07
CCDC197Q8NCU1 RNU6-1032P-201ENST00000384100 107 ntBASIC2.11□□□□□ -2.07
CCDC197Q8NCU1 SNORA44-201ENST00000384584 132 ntBASIC2.11□□□□□ -2.07
CCDC197Q8NCU1 MIR544A-201ENST00000384855 91 ntBASIC2.11□□□□□ -2.07
CCDC197Q8NCU1 MIR181A1-201ENST00000385026 110 ntBASIC2.11□□□□□ -2.07
CCDC197Q8NCU1 CBX3P9-201ENST00000402326 552 ntBASIC2.11□□□□□ -2.07
CCDC197Q8NCU1 AL355497.1-201ENST00000406262 551 ntBASIC2.11□□□□□ -2.07
CCDC197Q8NCU1 RNU6-1068P-201ENST00000410958 103 ntBASIC2.11□□□□□ -2.07
CCDC197Q8NCU1 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.11□□□□□ -2.07
CCDC197Q8NCU1 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.11□□□□□ -2.07
CCDC197Q8NCU1 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.11□□□□□ -2.07
CCDC197Q8NCU1 IPO7P1-201ENST00000442031 636 ntBASIC2.11□□□□□ -2.07
CCDC197Q8NCU1 RPL39P29-201ENST00000447779 157 ntBASIC2.11□□□□□ -2.07
CCDC197Q8NCU1 AL031274.1-201ENST00000450334 232 ntBASIC2.11□□□□□ -2.07
CCDC197Q8NCU1 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.11□□□□□ -2.07
CCDC197Q8NCU1 RNU7-138P-201ENST00000459479 64 ntBASIC2.11□□□□□ -2.07
CCDC197Q8NCU1 RNU6-1208P-201ENST00000459588 107 ntBASIC2.11□□□□□ -2.07
CCDC197Q8NCU1 AC068781.1-201ENST00000488231 618 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms