Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 GSTA9P-201ENST00000406231 611 ntBASIC2.43□□□□□ -2.02
CCDC89Q8N998 MIR1294-201ENST00000408503 142 ntBASIC2.43□□□□□ -2.02
CCDC89Q8N998 RNA5SP184-201ENST00000411071 108 ntBASIC2.43□□□□□ -2.02
CCDC89Q8N998 AL158823.1-201ENST00000418441 478 ntBASIC2.43□□□□□ -2.02
CCDC89Q8N998 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.43□□□□□ -2.02
CCDC89Q8N998 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.43□□□□□ -2.02
CCDC89Q8N998 AL031274.1-201ENST00000450334 232 ntBASIC2.43□□□□□ -2.02
CCDC89Q8N998 AC009646.1-201ENST00000510455 318 ntBASIC2.43□□□□□ -2.02
CCDC89Q8N998 AC026436.1-201ENST00000510537 270 ntBASIC2.43□□□□□ -2.02
CCDC89Q8N998 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.43□□□□□ -2.02
CCDC89Q8N998 HIF1AP1-201ENST00000553642 175 ntBASIC2.43□□□□□ -2.02
CCDC89Q8N998 AC007375.1-201ENST00000554513 578 ntBASIC2.43□□□□□ -2.02
CCDC89Q8N998 AC007336.1-201ENST00000576365 3828 ntBASIC2.43□□□□□ -2.02
CCDC89Q8N998 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.43□□□□□ -2.02
CCDC89Q8N998 AL034555.1-201ENST00000604816 211 ntBASIC2.43□□□□□ -2.02
CCDC89Q8N998 AL033523.1-201ENST00000605153 153 ntBASIC2.43□□□□□ -2.02
CCDC89Q8N998 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
CCDC89Q8N998 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.43□□□□□ -2.02
CCDC89Q8N998 AC241585.2-209ENST00000638217 143 ntBASIC2.43□□□□□ -2.02
CCDC89Q8N998 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CCDC89Q8N998 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC89Q8N998 AC005336.3-201ENST00000623833 2679 ntBASIC2.42□□□□□ -2.02
CCDC89Q8N998 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC89Q8N998 RNU6-743P-201ENST00000364151 106 ntBASIC2.42□□□□□ -2.02
CCDC89Q8N998 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC89Q8N998 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC89Q8N998 RNU6-142P-201ENST00000384019 107 ntBASIC2.42□□□□□ -2.02
CCDC89Q8N998 RNU6-43P-201ENST00000384302 107 ntBASIC2.42□□□□□ -2.02
CCDC89Q8N998 RNU6-692P-201ENST00000384496 107 ntBASIC2.42□□□□□ -2.02
CCDC89Q8N998 AL117339.3-201ENST00000418733 162 ntBASIC2.42□□□□□ -2.02
CCDC89Q8N998 AC002486.1-201ENST00000435098 391 ntBASIC2.42□□□□□ -2.02
CCDC89Q8N998 MTND2P29-201ENST00000438595 412 ntBASIC2.42□□□□□ -2.02
CCDC89Q8N998 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.42□□□□□ -2.02
CCDC89Q8N998 MTCO1P19-201ENST00000443487 500 ntBASIC2.42□□□□□ -2.02
CCDC89Q8N998 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.42□□□□□ -2.02
CCDC89Q8N998 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.42□□□□□ -2.02
CCDC89Q8N998 SNRPGP7-201ENST00000469016 106 ntBASIC2.42□□□□□ -2.02
CCDC89Q8N998 HMGB1P29-201ENST00000505659 499 ntBASIC2.42□□□□□ -2.02
CCDC89Q8N998 AC010424.1-201ENST00000506336 297 ntBASIC2.42□□□□□ -2.02
CCDC89Q8N998 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.42□□□□□ -2.02
CCDC89Q8N998 AK3P2-201ENST00000507976 429 ntBASIC2.42□□□□□ -2.02
CCDC89Q8N998 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.42□□□□□ -2.02
CCDC89Q8N998 RNA5SP356-201ENST00000515972 94 ntBASIC2.42□□□□□ -2.02
CCDC89Q8N998 MIR514B-201ENST00000516774 80 ntBASIC2.42□□□□□ -2.02
CCDC89Q8N998 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.42□□□□□ -2.02
CCDC89Q8N998 AC021269.2-201ENST00000532318 330 ntBASIC2.42□□□□□ -2.02
CCDC89Q8N998 TRAV32-201ENST00000553993 340 ntBASIC2.42□□□□□ -2.02
CCDC89Q8N998 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.42□□□□□ -2.02
CCDC89Q8N998 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.42□□□□□ -2.02
CCDC89Q8N998 AC004223.2-201ENST00000590309 544 ntBASIC2.42□□□□□ -2.02
CCDC89Q8N998 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.42□□□□□ -2.02
CCDC89Q8N998 AC243960.4-201ENST00000600532 288 ntBASIC2.42□□□□□ -2.02
CCDC89Q8N998 AC007684.1-201ENST00000609671 477 ntBASIC2.42□□□□□ -2.02
CCDC89Q8N998 AC104073.3-201ENST00000610942 955 ntBASIC2.42□□□□□ -2.02
CCDC89Q8N998 MIR6817-201ENST00000615588 66 ntBASIC2.42□□□□□ -2.02
CCDC89Q8N998 SNORD98-201ENST00000636377 67 ntBASIC2.42□□□□□ -2.02
CCDC89Q8N998 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.42□□□□□ -2.02
CCDC89Q8N998 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC89Q8N998 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
CCDC89Q8N998 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
CCDC89Q8N998 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
CCDC89Q8N998 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.42□□□□□ -2.02
CCDC89Q8N998 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CCDC89Q8N998 Y_RNA.296-201ENST00000364930 108 ntBASIC2.41□□□□□ -2.02
CCDC89Q8N998 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC89Q8N998 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.41□□□□□ -2.02
CCDC89Q8N998 MTCYBP8-201ENST00000422855 651 ntBASIC2.41□□□□□ -2.02
CCDC89Q8N998 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CCDC89Q8N998 AC010975.2-201ENST00000427781 588 ntBASIC2.41□□□□□ -2.02
CCDC89Q8N998 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.41□□□□□ -2.02
CCDC89Q8N998 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CCDC89Q8N998 AL163973.1-201ENST00000484753 577 ntBASIC2.41□□□□□ -2.02
CCDC89Q8N998 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC89Q8N998 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC89Q8N998 RNA5SP24-201ENST00000516478 95 ntBASIC2.41□□□□□ -2.02
CCDC89Q8N998 Y_RNA.688-201ENST00000516565 95 ntBASIC2.41□□□□□ -2.02
CCDC89Q8N998 EIF4BP1-201ENST00000554881 351 ntBASIC2.41□□□□□ -2.02
CCDC89Q8N998 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC89Q8N998 AP000654.2-201ENST00000605633 586 ntBASIC2.41□□□□□ -2.02
CCDC89Q8N998 AL359851.1-201ENST00000569460 4997 ntBASIC2.4□□□□□ -2.02
CCDC89Q8N998 AC009487.4-201ENST00000624969 3585 ntBASIC2.4□□□□□ -2.02
CCDC89Q8N998 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CCDC89Q8N998 RNA5SP68-201ENST00000363885 119 ntBASIC2.4□□□□□ -2.03
CCDC89Q8N998 SNORA80A-201ENST00000363922 136 ntBASIC2.4□□□□□ -2.03
CCDC89Q8N998 RNU4-56P-201ENST00000364700 142 ntBASIC2.4□□□□□ -2.03
CCDC89Q8N998 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC89Q8N998 AL139413.1-201ENST00000421309 217 ntBASIC2.4□□□□□ -2.03
CCDC89Q8N998 AC078809.1-201ENST00000427601 140 ntBASIC2.4□□□□□ -2.03
CCDC89Q8N998 AC244670.1-201ENST00000436879 112 ntBASIC2.4□□□□□ -2.03
CCDC89Q8N998 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.4□□□□□ -2.03
CCDC89Q8N998 RPL23AP6-201ENST00000446637 472 ntBASIC2.4□□□□□ -2.03
CCDC89Q8N998 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.4□□□□□ -2.03
CCDC89Q8N998 AL109933.2-201ENST00000452651 260 ntBASIC2.4□□□□□ -2.03
CCDC89Q8N998 RPL31P3-201ENST00000458430 332 ntBASIC2.4□□□□□ -2.03
CCDC89Q8N998 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC89Q8N998 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC89Q8N998 MRPS17P9-201ENST00000511924 393 ntBASIC2.4□□□□□ -2.03
CCDC89Q8N998 RNA5SP148-201ENST00000516527 94 ntBASIC2.4□□□□□ -2.03
CCDC89Q8N998 MTND4P7-201ENST00000523876 130 ntBASIC2.4□□□□□ -2.03
CCDC89Q8N998 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms