Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.38□□□□□ -1.71
DEPDC4Q8N2C3 RPS29P33-201ENST00000456717 146 ntBASIC4.38□□□□□ -1.71
DEPDC4Q8N2C3 AC010469.1-201ENST00000463864 576 ntBASIC4.38□□□□□ -1.71
DEPDC4Q8N2C3 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.38□□□□□ -1.71
DEPDC4Q8N2C3 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.38□□□□□ -1.71
DEPDC4Q8N2C3 AC018692.3-201ENST00000623929 123 ntBASIC4.38□□□□□ -1.71
DEPDC4Q8N2C3 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
DEPDC4Q8N2C3 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
DEPDC4Q8N2C3 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.38□□□□□ -1.71
DEPDC4Q8N2C3 AL136164.3-201ENST00000624429 3978 ntBASIC4.38□□□□□ -1.71
DEPDC4Q8N2C3 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
DEPDC4Q8N2C3 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
DEPDC4Q8N2C3 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
DEPDC4Q8N2C3 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
DEPDC4Q8N2C3 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
DEPDC4Q8N2C3 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.37□□□□□ -1.71
DEPDC4Q8N2C3 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
DEPDC4Q8N2C3 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
DEPDC4Q8N2C3 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.37□□□□□ -1.71
DEPDC4Q8N2C3 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
DEPDC4Q8N2C3 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.37□□□□□ -1.71
DEPDC4Q8N2C3 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
DEPDC4Q8N2C3 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
DEPDC4Q8N2C3 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
DEPDC4Q8N2C3 RNU1-75P-201ENST00000347264 129 ntBASIC4.37□□□□□ -1.71
DEPDC4Q8N2C3 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
DEPDC4Q8N2C3 AC004386.2-201ENST00000441858 148 ntBASIC4.37□□□□□ -1.71
DEPDC4Q8N2C3 RN7SL481P-201ENST00000477764 299 ntBASIC4.37□□□□□ -1.71
DEPDC4Q8N2C3 RPL31P41-201ENST00000477967 372 ntBASIC4.37□□□□□ -1.71
DEPDC4Q8N2C3 AC136628.3-201ENST00000521868 290 ntBASIC4.37□□□□□ -1.71
DEPDC4Q8N2C3 CARD18-203ENST00000532895 422 ntTSL 2 BASIC4.37□□□□□ -1.71
DEPDC4Q8N2C3 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC4.37□□□□□ -1.71
DEPDC4Q8N2C3 AL137843.1-201ENST00000605078 385 ntBASIC4.37□□□□□ -1.71
DEPDC4Q8N2C3 RPL17P51-201ENST00000605218 238 ntBASIC4.37□□□□□ -1.71
DEPDC4Q8N2C3 FAM27D1-201ENST00000612308 341 ntBASIC4.37□□□□□ -1.71
DEPDC4Q8N2C3 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.37□□□□□ -1.71
DEPDC4Q8N2C3 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
DEPDC4Q8N2C3 AP003122.5-201ENST00000527668 3766 ntBASIC4.37□□□□□ -1.71
DEPDC4Q8N2C3 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.37□□□□□ -1.71
DEPDC4Q8N2C3 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
DEPDC4Q8N2C3 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
DEPDC4Q8N2C3 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
DEPDC4Q8N2C3 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.36□□□□□ -1.71
DEPDC4Q8N2C3 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
DEPDC4Q8N2C3 RNU6-655P-201ENST00000362858 107 ntBASIC4.36□□□□□ -1.71
DEPDC4Q8N2C3 RNA5SP428-201ENST00000365129 132 ntBASIC4.36□□□□□ -1.71
DEPDC4Q8N2C3 MIR192-201ENST00000384915 110 ntBASIC4.36□□□□□ -1.71
DEPDC4Q8N2C3 MIR186-201ENST00000384988 86 ntBASIC4.36□□□□□ -1.71
DEPDC4Q8N2C3 MIR708-201ENST00000390708 88 ntBASIC4.36□□□□□ -1.71
DEPDC4Q8N2C3 RNU6-710P-201ENST00000410424 105 ntBASIC4.36□□□□□ -1.71
DEPDC4Q8N2C3 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.36□□□□□ -1.71
DEPDC4Q8N2C3 AC069285.2-201ENST00000440210 275 ntBASIC4.36□□□□□ -1.71
DEPDC4Q8N2C3 AC112498.1-201ENST00000444401 332 ntBASIC4.36□□□□□ -1.71
DEPDC4Q8N2C3 RPS27AP9-201ENST00000477681 438 ntBASIC4.36□□□□□ -1.71
DEPDC4Q8N2C3 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC4.36□□□□□ -1.71
DEPDC4Q8N2C3 RNA5SP497-201ENST00000516081 97 ntBASIC4.36□□□□□ -1.71
DEPDC4Q8N2C3 RNU6-107P-201ENST00000516643 102 ntBASIC4.36□□□□□ -1.71
DEPDC4Q8N2C3 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC4.36□□□□□ -1.71
DEPDC4Q8N2C3 MIR4691-201ENST00000583764 85 ntBASIC4.36□□□□□ -1.71
DEPDC4Q8N2C3 RN7SL722P-201ENST00000617780 284 ntBASIC4.36□□□□□ -1.71
DEPDC4Q8N2C3 RN7SL565P-201ENST00000618246 284 ntBASIC4.36□□□□□ -1.71
DEPDC4Q8N2C3 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.36□□□□□ -1.71
DEPDC4Q8N2C3 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
DEPDC4Q8N2C3 SDAD1P1-202ENST00000524156 2051 ntBASIC4.36□□□□□ -1.71
DEPDC4Q8N2C3 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
DEPDC4Q8N2C3 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
DEPDC4Q8N2C3 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
DEPDC4Q8N2C3 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
DEPDC4Q8N2C3 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
DEPDC4Q8N2C3 ZFRP1-201ENST00000457579 2970 ntBASIC4.35□□□□□ -1.71
DEPDC4Q8N2C3 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
DEPDC4Q8N2C3 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
DEPDC4Q8N2C3 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.35□□□□□ -1.71
DEPDC4Q8N2C3 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
DEPDC4Q8N2C3 RNU6-324P-201ENST00000363957 106 ntBASIC4.35□□□□□ -1.71
DEPDC4Q8N2C3 RNU1-57P-201ENST00000384491 166 ntBASIC4.35□□□□□ -1.71
DEPDC4Q8N2C3 U8.12-201ENST00000384701 133 ntBASIC4.35□□□□□ -1.71
DEPDC4Q8N2C3 RNA5SP38-201ENST00000410750 119 ntBASIC4.35□□□□□ -1.71
DEPDC4Q8N2C3 AC004866.1-201ENST00000411748 78 ntBASIC4.35□□□□□ -1.71
DEPDC4Q8N2C3 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC4.35□□□□□ -1.71
DEPDC4Q8N2C3 AC027124.2-201ENST00000428249 105 ntBASIC4.35□□□□□ -1.71
DEPDC4Q8N2C3 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.35□□□□□ -1.71
DEPDC4Q8N2C3 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.35□□□□□ -1.71
DEPDC4Q8N2C3 SCARNA10-201ENST00000459255 330 ntBASIC4.35□□□□□ -1.71
DEPDC4Q8N2C3 RPS26P28-201ENST00000470806 348 ntBASIC4.35□□□□□ -1.71
DEPDC4Q8N2C3 AL049830.2-201ENST00000480072 201 ntBASIC4.35□□□□□ -1.71
DEPDC4Q8N2C3 AC100767.1-201ENST00000528178 123 ntBASIC4.35□□□□□ -1.71
DEPDC4Q8N2C3 AC008033.2-201ENST00000542626 177 ntBASIC4.35□□□□□ -1.71
DEPDC4Q8N2C3 AC074050.1-201ENST00000563247 211 ntBASIC4.35□□□□□ -1.71
DEPDC4Q8N2C3 AC025281.1-201ENST00000567026 265 ntBASIC4.35□□□□□ -1.71
DEPDC4Q8N2C3 AC015912.2-201ENST00000571053 181 ntBASIC4.35□□□□□ -1.71
DEPDC4Q8N2C3 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.35□□□□□ -1.71
DEPDC4Q8N2C3 uc_338.14-201ENST00000613162 166 ntBASIC4.35□□□□□ -1.71
DEPDC4Q8N2C3 MIR7641-1-201ENST00000627518 61 ntBASIC4.35□□□□□ -1.71
DEPDC4Q8N2C3 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
DEPDC4Q8N2C3 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.35□□□□□ -1.71
DEPDC4Q8N2C3 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.35□□□□□ -1.71
DEPDC4Q8N2C3 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
DEPDC4Q8N2C3 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
DEPDC4Q8N2C3 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms