Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.01□□□□□ -1.93
VPS52Q8N1B4 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.01□□□□□ -1.93
VPS52Q8N1B4 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.01□□□□□ -1.93
VPS52Q8N1B4 AC092436.3-201ENST00000511788 257 ntBASIC3.01□□□□□ -1.93
VPS52Q8N1B4 AC109479.2-201ENST00000517842 174 ntBASIC3.01□□□□□ -1.93
VPS52Q8N1B4 AP005639.2-201ENST00000527592 928 ntBASIC3.01□□□□□ -1.93
VPS52Q8N1B4 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.01□□□□□ -1.93
VPS52Q8N1B4 RPS3AP23-202ENST00000574601 686 ntBASIC3.01□□□□□ -1.93
VPS52Q8N1B4 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.01□□□□□ -1.93
VPS52Q8N1B4 C8orf59P2-201ENST00000603441 271 ntBASIC3.01□□□□□ -1.93
VPS52Q8N1B4 MIR6733-201ENST00000635723 61 ntBASIC3.01□□□□□ -1.93
VPS52Q8N1B4 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.01□□□□□ -1.93
VPS52Q8N1B4 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
VPS52Q8N1B4 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3□□□□□ -1.93
VPS52Q8N1B4 RNU6-78P-201ENST00000362897 107 ntBASIC3□□□□□ -1.93
VPS52Q8N1B4 RNU1-112P-201ENST00000364401 164 ntBASIC3□□□□□ -1.93
VPS52Q8N1B4 Y_RNA.474-201ENST00000384341 102 ntBASIC3□□□□□ -1.93
VPS52Q8N1B4 SNORD73A-201ENST00000386062 65 ntBASIC3□□□□□ -1.93
VPS52Q8N1B4 AL138827.1-201ENST00000402666 306 ntBASIC3□□□□□ -1.93
VPS52Q8N1B4 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3□□□□□ -1.93
VPS52Q8N1B4 AL645568.3-201ENST00000433683 316 ntBASIC3□□□□□ -1.93
VPS52Q8N1B4 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3□□□□□ -1.93
VPS52Q8N1B4 MTND5P5-201ENST00000503764 376 ntBASIC3□□□□□ -1.93
VPS52Q8N1B4 SEM1P1-201ENST00000506694 209 ntBASIC3□□□□□ -1.93
VPS52Q8N1B4 MTCYBP40-201ENST00000509390 1135 ntBASIC3□□□□□ -1.93
VPS52Q8N1B4 MTND3P22-201ENST00000510932 243 ntBASIC3□□□□□ -1.93
VPS52Q8N1B4 RNA5SP76-201ENST00000516277 87 ntBASIC3□□□□□ -1.93
VPS52Q8N1B4 Y_RNA.682-201ENST00000516457 100 ntBASIC3□□□□□ -1.93
VPS52Q8N1B4 SNORD19.2-201ENST00000516978 73 ntBASIC3□□□□□ -1.93
VPS52Q8N1B4 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3□□□□□ -1.93
VPS52Q8N1B4 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3□□□□□ -1.93
VPS52Q8N1B4 AC026371.1-201ENST00000551867 419 ntBASIC3□□□□□ -1.93
VPS52Q8N1B4 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3□□□□□ -1.93
VPS52Q8N1B4 UBE2Q2P8-201ENST00000560644 102 ntBASIC3□□□□□ -1.93
VPS52Q8N1B4 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3□□□□□ -1.93
VPS52Q8N1B4 ELOCP5-201ENST00000604924 333 ntBASIC3□□□□□ -1.93
VPS52Q8N1B4 AC104237.2-201ENST00000612456 443 ntBASIC3□□□□□ -1.93
VPS52Q8N1B4 AC138627.2-201ENST00000624202 601 ntBASIC3□□□□□ -1.93
VPS52Q8N1B4 U4.7-201ENST00000638126 106 ntBASIC3□□□□□ -1.93
VPS52Q8N1B4 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3□□□□□ -1.93
VPS52Q8N1B4 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3□□□□□ -1.93
VPS52Q8N1B4 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
VPS52Q8N1B4 SNORD21-201ENST00000383953 95 ntBASIC2.99□□□□□ -1.93
VPS52Q8N1B4 Y_RNA.529-201ENST00000384586 119 ntBASIC2.99□□□□□ -1.93
VPS52Q8N1B4 MIR9-1-201ENST00000385198 89 ntBASIC2.99□□□□□ -1.93
VPS52Q8N1B4 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.99□□□□□ -1.93
VPS52Q8N1B4 OOSP1P1-201ENST00000423265 274 ntBASIC2.99□□□□□ -1.93
VPS52Q8N1B4 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.99□□□□□ -1.93
VPS52Q8N1B4 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
VPS52Q8N1B4 EEF1B2P7-201ENST00000451177 676 ntBASIC2.99□□□□□ -1.93
VPS52Q8N1B4 GSTA11P-201ENST00000452866 669 ntBASIC2.99□□□□□ -1.93
VPS52Q8N1B4 RPS27AP9-201ENST00000477681 438 ntBASIC2.99□□□□□ -1.93
VPS52Q8N1B4 RNU6-277P-201ENST00000516272 106 ntBASIC2.99□□□□□ -1.93
VPS52Q8N1B4 SNORA43.2-201ENST00000516652 128 ntBASIC2.99□□□□□ -1.93
VPS52Q8N1B4 RPPH1-2P-201ENST00000516688 293 ntBASIC2.99□□□□□ -1.93
VPS52Q8N1B4 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.99□□□□□ -1.93
VPS52Q8N1B4 AC064836.2-201ENST00000609491 462 ntBASIC2.99□□□□□ -1.93
VPS52Q8N1B4 AL359697.1-201ENST00000624879 587 ntBASIC2.99□□□□□ -1.93
VPS52Q8N1B4 MIR3199-2-201ENST00000636243 86 ntBASIC2.99□□□□□ -1.93
VPS52Q8N1B4 ADAM3A-203ENST00000461344 2157 ntBASIC2.99□□□□□ -1.93
VPS52Q8N1B4 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
VPS52Q8N1B4 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
VPS52Q8N1B4 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
VPS52Q8N1B4 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
VPS52Q8N1B4 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.98□□□□□ -1.93
VPS52Q8N1B4 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.98□□□□□ -1.93
VPS52Q8N1B4 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.98□□□□□ -1.93
VPS52Q8N1B4 RNU6-859P-201ENST00000362728 107 ntBASIC2.98□□□□□ -1.93
VPS52Q8N1B4 RNU1-35P-201ENST00000362782 153 ntBASIC2.98□□□□□ -1.93
VPS52Q8N1B4 RNU6-1180P-201ENST00000364935 107 ntBASIC2.98□□□□□ -1.93
VPS52Q8N1B4 RNU5E-7P-201ENST00000365290 117 ntBASIC2.98□□□□□ -1.93
VPS52Q8N1B4 RNU6-95P-201ENST00000384697 107 ntBASIC2.98□□□□□ -1.93
VPS52Q8N1B4 AL078595.1-201ENST00000404458 226 ntBASIC2.98□□□□□ -1.93
VPS52Q8N1B4 RN7SKP158-201ENST00000410453 326 ntBASIC2.98□□□□□ -1.93
VPS52Q8N1B4 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.98□□□□□ -1.93
VPS52Q8N1B4 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.98□□□□□ -1.93
VPS52Q8N1B4 AC096649.2-201ENST00000416186 393 ntBASIC2.98□□□□□ -1.93
VPS52Q8N1B4 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
VPS52Q8N1B4 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.98□□□□□ -1.93
VPS52Q8N1B4 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.98□□□□□ -1.93
VPS52Q8N1B4 RPL39P40-201ENST00000445481 146 ntBASIC2.98□□□□□ -1.93
VPS52Q8N1B4 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.98□□□□□ -1.93
VPS52Q8N1B4 AC092001.1-201ENST00000453012 261 ntBASIC2.98□□□□□ -1.93
VPS52Q8N1B4 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
VPS52Q8N1B4 AC006026.2-201ENST00000457376 180 ntBASIC2.98□□□□□ -1.93
VPS52Q8N1B4 AC116655.1-201ENST00000508324 901 ntBASIC2.98□□□□□ -1.93
VPS52Q8N1B4 AC096745.1-201ENST00000509945 370 ntBASIC2.98□□□□□ -1.93
VPS52Q8N1B4 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.98□□□□□ -1.93
VPS52Q8N1B4 RNU6-273P-201ENST00000516937 96 ntBASIC2.98□□□□□ -1.93
VPS52Q8N1B4 CR383656.8-201ENST00000549046 145 ntBASIC2.98□□□□□ -1.93
VPS52Q8N1B4 AL121821.2-201ENST00000556081 394 ntBASIC2.98□□□□□ -1.93
VPS52Q8N1B4 AC025281.1-201ENST00000567026 265 ntBASIC2.98□□□□□ -1.93
VPS52Q8N1B4 AC007151.1-201ENST00000572774 483 ntBASIC2.98□□□□□ -1.93
VPS52Q8N1B4 MTCO3P13-201ENST00000577757 781 ntBASIC2.98□□□□□ -1.93
VPS52Q8N1B4 AC243960.4-201ENST00000600532 288 ntBASIC2.98□□□□□ -1.93
VPS52Q8N1B4 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.98□□□□□ -1.93
VPS52Q8N1B4 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
VPS52Q8N1B4 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
VPS52Q8N1B4 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.98□□□□□ -1.93
VPS52Q8N1B4 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms