Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 RNA5SP317-201ENST00000410176 116 ntBASIC3.76□□□□□ -1.81
ATG4DQ86TL0 RNA5SP311-201ENST00000411290 116 ntBASIC3.76□□□□□ -1.81
ATG4DQ86TL0 AL160275.2-201ENST00000412010 394 ntBASIC3.76□□□□□ -1.81
ATG4DQ86TL0 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.76□□□□□ -1.81
ATG4DQ86TL0 RPL23AP58-201ENST00000440453 469 ntBASIC3.76□□□□□ -1.81
ATG4DQ86TL0 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.76□□□□□ -1.81
ATG4DQ86TL0 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
ATG4DQ86TL0 RNA5SP315-201ENST00000516340 116 ntBASIC3.76□□□□□ -1.81
ATG4DQ86TL0 RNA5SP312-201ENST00000517068 116 ntBASIC3.76□□□□□ -1.81
ATG4DQ86TL0 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.76□□□□□ -1.81
ATG4DQ86TL0 AC018448.1-201ENST00000552843 316 ntBASIC3.76□□□□□ -1.81
ATG4DQ86TL0 AC007224.1-201ENST00000564410 144 ntBASIC3.76□□□□□ -1.81
ATG4DQ86TL0 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.76□□□□□ -1.81
ATG4DQ86TL0 AC010999.1-201ENST00000611856 324 ntBASIC3.76□□□□□ -1.81
ATG4DQ86TL0 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.76□□□□□ -1.81
ATG4DQ86TL0 AC068700.1-201ENST00000565862 3754 ntBASIC3.76□□□□□ -1.81
ATG4DQ86TL0 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.76□□□□□ -1.81
ATG4DQ86TL0 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.76□□□□□ -1.81
ATG4DQ86TL0 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.76□□□□□ -1.81
ATG4DQ86TL0 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.76□□□□□ -1.81
ATG4DQ86TL0 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
ATG4DQ86TL0 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.75□□□□□ -1.81
ATG4DQ86TL0 AL356489.2-201ENST00000566968 3528 ntBASIC3.75□□□□□ -1.81
ATG4DQ86TL0 SNORD74.4-201ENST00000364129 80 ntBASIC3.75□□□□□ -1.81
ATG4DQ86TL0 RNU6-142P-201ENST00000384019 107 ntBASIC3.75□□□□□ -1.81
ATG4DQ86TL0 MIR153-1-201ENST00000384914 90 ntBASIC3.75□□□□□ -1.81
ATG4DQ86TL0 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.75□□□□□ -1.81
ATG4DQ86TL0 CYP4F29P-201ENST00000420685 446 ntBASIC3.75□□□□□ -1.81
ATG4DQ86TL0 AC098614.2-201ENST00000426040 255 ntBASIC3.75□□□□□ -1.81
ATG4DQ86TL0 RPL12P46-201ENST00000436610 195 ntBASIC3.75□□□□□ -1.81
ATG4DQ86TL0 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.75□□□□□ -1.81
ATG4DQ86TL0 snoU13.6-201ENST00000458785 104 ntBASIC3.75□□□□□ -1.81
ATG4DQ86TL0 KC877373.1-201ENST00000479066 408 ntBASIC3.75□□□□□ -1.81
ATG4DQ86TL0 UBE2CP3-201ENST00000502715 450 ntBASIC3.75□□□□□ -1.81
ATG4DQ86TL0 AC025445.1-201ENST00000502728 300 ntBASIC3.75□□□□□ -1.81
ATG4DQ86TL0 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
ATG4DQ86TL0 SCARNA15.2-201ENST00000516409 127 ntBASIC3.75□□□□□ -1.81
ATG4DQ86TL0 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.75□□□□□ -1.81
ATG4DQ86TL0 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.75□□□□□ -1.81
ATG4DQ86TL0 AL138963.2-201ENST00000605137 226 ntBASIC3.75□□□□□ -1.81
ATG4DQ86TL0 AC027309.3-201ENST00000623419 351 ntBASIC3.75□□□□□ -1.81
ATG4DQ86TL0 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
ATG4DQ86TL0 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.75□□□□□ -1.81
ATG4DQ86TL0 MARK2P15-201ENST00000432204 2186 ntBASIC3.75□□□□□ -1.81
ATG4DQ86TL0 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
ATG4DQ86TL0 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.74□□□□□ -1.81
ATG4DQ86TL0 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.74□□□□□ -1.81
ATG4DQ86TL0 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.74□□□□□ -1.81
ATG4DQ86TL0 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
ATG4DQ86TL0 MIR448-201ENST00000362131 111 ntBASIC3.74□□□□□ -1.81
ATG4DQ86TL0 MIR372-201ENST00000362225 67 ntBASIC3.74□□□□□ -1.81
ATG4DQ86TL0 RNU6-137P-201ENST00000363680 108 ntBASIC3.74□□□□□ -1.81
ATG4DQ86TL0 RNA5SP513-201ENST00000364648 118 ntBASIC3.74□□□□□ -1.81
ATG4DQ86TL0 RNU1-140P-201ENST00000365040 165 ntBASIC3.74□□□□□ -1.81
ATG4DQ86TL0 RNU6-147P-201ENST00000383983 107 ntBASIC3.74□□□□□ -1.81
ATG4DQ86TL0 RNU6-1144P-201ENST00000384247 104 ntBASIC3.74□□□□□ -1.81
ATG4DQ86TL0 Y_RNA.498-201ENST00000384460 102 ntBASIC3.74□□□□□ -1.81
ATG4DQ86TL0 RNU1-13P-201ENST00000384499 162 ntBASIC3.74□□□□□ -1.81
ATG4DQ86TL0 Y_RNA.572-201ENST00000384757 98 ntBASIC3.74□□□□□ -1.81
ATG4DQ86TL0 MIR888-201ENST00000401186 77 ntBASIC3.74□□□□□ -1.81
ATG4DQ86TL0 U3.37-201ENST00000408528 213 ntBASIC3.74□□□□□ -1.81
ATG4DQ86TL0 RNU2-68P-201ENST00000410878 191 ntBASIC3.74□□□□□ -1.81
ATG4DQ86TL0 RNA5SP104-201ENST00000410989 118 ntBASIC3.74□□□□□ -1.81
ATG4DQ86TL0 RNA5SP31-201ENST00000411144 127 ntBASIC3.74□□□□□ -1.81
ATG4DQ86TL0 AC006461.1-201ENST00000412637 326 ntBASIC3.74□□□□□ -1.81
ATG4DQ86TL0 AC006011.1-201ENST00000442758 349 ntBASIC3.74□□□□□ -1.81
ATG4DQ86TL0 AL357134.1-201ENST00000445848 426 ntBASIC3.74□□□□□ -1.81
ATG4DQ86TL0 IFNWP4-201ENST00000453148 294 ntBASIC3.74□□□□□ -1.81
ATG4DQ86TL0 AC092991.1-201ENST00000477176 376 ntBASIC3.74□□□□□ -1.81
ATG4DQ86TL0 RN7SKP164-201ENST00000516138 266 ntBASIC3.74□□□□□ -1.81
ATG4DQ86TL0 RNU7-143P-201ENST00000516781 65 ntBASIC3.74□□□□□ -1.81
ATG4DQ86TL0 RNU2-56P-201ENST00000516826 190 ntBASIC3.74□□□□□ -1.81
ATG4DQ86TL0 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.74□□□□□ -1.81
ATG4DQ86TL0 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.74□□□□□ -1.81
ATG4DQ86TL0 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.74□□□□□ -1.81
ATG4DQ86TL0 AC009127.3-201ENST00000570531 403 ntBASIC3.74□□□□□ -1.81
ATG4DQ86TL0 RN7SL600P-201ENST00000581811 299 ntBASIC3.74□□□□□ -1.81
ATG4DQ86TL0 AC024153.1-201ENST00000603103 365 ntBASIC3.74□□□□□ -1.81
ATG4DQ86TL0 MIR7151-201ENST00000617477 60 ntBASIC3.74□□□□□ -1.81
ATG4DQ86TL0 RNA5SP196-201ENST00000625967 102 ntBASIC3.74□□□□□ -1.81
ATG4DQ86TL0 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
ATG4DQ86TL0 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.74□□□□□ -1.81
ATG4DQ86TL0 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
ATG4DQ86TL0 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
ATG4DQ86TL0 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.73□□□□□ -1.81
ATG4DQ86TL0 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
ATG4DQ86TL0 MTND5P35-201ENST00000557537 1720 ntBASIC3.73□□□□□ -1.81
ATG4DQ86TL0 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
ATG4DQ86TL0 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.73□□□□□ -1.81
ATG4DQ86TL0 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
ATG4DQ86TL0 RNU6-173P-201ENST00000364215 104 ntBASIC3.73□□□□□ -1.81
ATG4DQ86TL0 Y_RNA.329-201ENST00000365209 107 ntBASIC3.73□□□□□ -1.81
ATG4DQ86TL0 Y_RNA.337-201ENST00000365312 102 ntBASIC3.73□□□□□ -1.81
ATG4DQ86TL0 RNU6-376P-201ENST00000384731 106 ntBASIC3.73□□□□□ -1.81
ATG4DQ86TL0 RPS26P8-201ENST00000393490 348 ntBASIC3.73□□□□□ -1.81
ATG4DQ86TL0 RNA5SP89-201ENST00000410300 108 ntBASIC3.73□□□□□ -1.81
ATG4DQ86TL0 RNU6-1245P-201ENST00000411130 106 ntBASIC3.73□□□□□ -1.81
ATG4DQ86TL0 AL358075.3-201ENST00000426289 226 ntBASIC3.73□□□□□ -1.81
ATG4DQ86TL0 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.73□□□□□ -1.81
ATG4DQ86TL0 AL353748.1-201ENST00000440753 474 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms