Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.62□□□□□ -1.99
PACS1Q6VY07 Y_RNA.70-201ENST00000362886 110 ntBASIC2.62□□□□□ -1.99
PACS1Q6VY07 RNU6-867P-201ENST00000364956 107 ntBASIC2.62□□□□□ -1.99
PACS1Q6VY07 AL356057.3-201ENST00000402607 340 ntBASIC2.62□□□□□ -1.99
PACS1Q6VY07 NDUFB4P4-201ENST00000404822 243 ntBASIC2.62□□□□□ -1.99
PACS1Q6VY07 U3.37-201ENST00000408528 213 ntBASIC2.62□□□□□ -1.99
PACS1Q6VY07 MTND3P8-201ENST00000412909 339 ntBASIC2.62□□□□□ -1.99
PACS1Q6VY07 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.62□□□□□ -1.99
PACS1Q6VY07 VN1R36P-201ENST00000414936 291 ntBASIC2.62□□□□□ -1.99
PACS1Q6VY07 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.62□□□□□ -1.99
PACS1Q6VY07 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.62□□□□□ -1.99
PACS1Q6VY07 AL445687.1-201ENST00000439946 251 ntBASIC2.62□□□□□ -1.99
PACS1Q6VY07 AC011816.1-201ENST00000441346 546 ntBASIC2.62□□□□□ -1.99
PACS1Q6VY07 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.62□□□□□ -1.99
PACS1Q6VY07 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.62□□□□□ -1.99
PACS1Q6VY07 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.62□□□□□ -1.99
PACS1Q6VY07 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.62□□□□□ -1.99
PACS1Q6VY07 AL139109.1-201ENST00000455491 297 ntBASIC2.62□□□□□ -1.99
PACS1Q6VY07 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.62□□□□□ -1.99
PACS1Q6VY07 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.62□□□□□ -1.99
PACS1Q6VY07 RNU6-864P-201ENST00000516256 108 ntBASIC2.62□□□□□ -1.99
PACS1Q6VY07 RNU7-30P-201ENST00000516835 62 ntBASIC2.62□□□□□ -1.99
PACS1Q6VY07 Y_RNA.702-201ENST00000516843 96 ntBASIC2.62□□□□□ -1.99
PACS1Q6VY07 RNU6-1088P-201ENST00000516850 104 ntBASIC2.62□□□□□ -1.99
PACS1Q6VY07 RNA5SP402-201ENST00000517148 110 ntBASIC2.62□□□□□ -1.99
PACS1Q6VY07 AC069113.1-201ENST00000517763 267 ntBASIC2.62□□□□□ -1.99
PACS1Q6VY07 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
PACS1Q6VY07 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.62□□□□□ -1.99
PACS1Q6VY07 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.62□□□□□ -1.99
PACS1Q6VY07 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.62□□□□□ -1.99
PACS1Q6VY07 AC090616.3-201ENST00000582184 217 ntBASIC2.62□□□□□ -1.99
PACS1Q6VY07 MIR3616-201ENST00000584070 92 ntBASIC2.62□□□□□ -1.99
PACS1Q6VY07 AC011471.1-201ENST00000585766 187 ntBASIC2.62□□□□□ -1.99
PACS1Q6VY07 AC008121.1-201ENST00000603244 268 ntBASIC2.62□□□□□ -1.99
PACS1Q6VY07 AL670379.10-201ENST00000604330 253 ntBASIC2.62□□□□□ -1.99
PACS1Q6VY07 AL670379.9-201ENST00000605428 253 ntBASIC2.62□□□□□ -1.99
PACS1Q6VY07 AC009994.1-201ENST00000606889 253 ntBASIC2.62□□□□□ -1.99
PACS1Q6VY07 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.62□□□□□ -1.99
PACS1Q6VY07 MIR7106-201ENST00000612419 65 ntBASIC2.62□□□□□ -1.99
PACS1Q6VY07 AC006386.2-201ENST00000624491 75 ntBASIC2.62□□□□□ -1.99
PACS1Q6VY07 AC012005.1-201ENST00000624575 75 ntBASIC2.62□□□□□ -1.99
PACS1Q6VY07 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
PACS1Q6VY07 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
PACS1Q6VY07 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.62□□□□□ -1.99
PACS1Q6VY07 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.62□□□□□ -1.99
PACS1Q6VY07 CDC27P3-201ENST00000635418 1910 ntBASIC2.62□□□□□ -1.99
PACS1Q6VY07 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.62□□□□□ -1.99
PACS1Q6VY07 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.61□□□□□ -1.99
PACS1Q6VY07 RNU6-859P-201ENST00000362728 107 ntBASIC2.61□□□□□ -1.99
PACS1Q6VY07 RNU6-942P-201ENST00000363002 107 ntBASIC2.61□□□□□ -1.99
PACS1Q6VY07 Y_RNA.184-201ENST00000363884 108 ntBASIC2.61□□□□□ -1.99
PACS1Q6VY07 SNORD81.2-201ENST00000365153 76 ntBASIC2.61□□□□□ -1.99
PACS1Q6VY07 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
PACS1Q6VY07 SNORA80E-201ENST00000384744 137 ntBASIC2.61□□□□□ -1.99
PACS1Q6VY07 MIR144-201ENST00000384886 86 ntBASIC2.61□□□□□ -1.99
PACS1Q6VY07 RNU6-510P-201ENST00000391239 108 ntBASIC2.61□□□□□ -1.99
PACS1Q6VY07 AC025750.2-201ENST00000442609 450 ntBASIC2.61□□□□□ -1.99
PACS1Q6VY07 PPP1R2P5-201ENST00000457256 603 ntBASIC2.61□□□□□ -1.99
PACS1Q6VY07 RPL23AP45-201ENST00000476406 468 ntBASIC2.61□□□□□ -1.99
PACS1Q6VY07 AC096576.1-201ENST00000489014 359 ntBASIC2.61□□□□□ -1.99
PACS1Q6VY07 AC026801.1-201ENST00000497178 464 ntBASIC2.61□□□□□ -1.99
PACS1Q6VY07 TRBVA-201ENST00000498804 316 ntBASIC2.61□□□□□ -1.99
PACS1Q6VY07 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.61□□□□□ -1.99
PACS1Q6VY07 HMGB3P3-201ENST00000510526 400 ntBASIC2.61□□□□□ -1.99
PACS1Q6VY07 AC087854.1-201ENST00000519706 414 ntBASIC2.61□□□□□ -1.99
PACS1Q6VY07 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.61□□□□□ -1.99
PACS1Q6VY07 AC104576.1-201ENST00000524225 88 ntBASIC2.61□□□□□ -1.99
PACS1Q6VY07 AP000889.2-201ENST00000532684 490 ntBASIC2.61□□□□□ -1.99
PACS1Q6VY07 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.61□□□□□ -1.99
PACS1Q6VY07 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.61□□□□□ -1.99
PACS1Q6VY07 UBE2V2P2-201ENST00000587677 504 ntBASIC2.61□□□□□ -1.99
PACS1Q6VY07 OR1M4P-201ENST00000589199 287 ntBASIC2.61□□□□□ -1.99
PACS1Q6VY07 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.61□□□□□ -1.99
PACS1Q6VY07 RMST_7.1-201ENST00000621935 268 ntBASIC2.61□□□□□ -1.99
PACS1Q6VY07 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
PACS1Q6VY07 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
PACS1Q6VY07 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.6□□□□□ -1.99
PACS1Q6VY07 RNU6-78P-201ENST00000362897 107 ntBASIC2.6□□□□□ -1.99
PACS1Q6VY07 RNU5E-4P-201ENST00000364931 120 ntBASIC2.6□□□□□ -1.99
PACS1Q6VY07 Y_RNA.301-201ENST00000364990 103 ntBASIC2.6□□□□□ -1.99
PACS1Q6VY07 RNU6-1280P-201ENST00000365211 107 ntBASIC2.6□□□□□ -1.99
PACS1Q6VY07 FTH1P15-201ENST00000406984 280 ntBASIC2.6□□□□□ -1.99
PACS1Q6VY07 RAP1BP3-201ENST00000407180 549 ntBASIC2.6□□□□□ -1.99
PACS1Q6VY07 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.6□□□□□ -1.99
PACS1Q6VY07 SNORD56-201ENST00000413522 71 ntBASIC2.6□□□□□ -1.99
PACS1Q6VY07 AL161651.1-201ENST00000440882 223 ntBASIC2.6□□□□□ -1.99
PACS1Q6VY07 IPO7P1-201ENST00000442031 636 ntBASIC2.6□□□□□ -1.99
PACS1Q6VY07 HIGD1AP2-201ENST00000446367 280 ntBASIC2.6□□□□□ -1.99
PACS1Q6VY07 AL031274.1-201ENST00000450334 232 ntBASIC2.6□□□□□ -1.99
PACS1Q6VY07 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.6□□□□□ -1.99
PACS1Q6VY07 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.6□□□□□ -1.99
PACS1Q6VY07 RPL31P41-201ENST00000477967 372 ntBASIC2.6□□□□□ -1.99
PACS1Q6VY07 RPS27P27-201ENST00000498779 255 ntBASIC2.6□□□□□ -1.99
PACS1Q6VY07 AC103851.1-201ENST00000506833 274 ntBASIC2.6□□□□□ -1.99
PACS1Q6VY07 AC116655.1-201ENST00000508324 901 ntBASIC2.6□□□□□ -1.99
PACS1Q6VY07 MRPS36P2-201ENST00000512569 299 ntBASIC2.6□□□□□ -1.99
PACS1Q6VY07 AC114781.4-201ENST00000513707 639 ntBASIC2.6□□□□□ -1.99
PACS1Q6VY07 RNU6-875P-201ENST00000516488 106 ntBASIC2.6□□□□□ -1.99
PACS1Q6VY07 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.6□□□□□ -1.99
PACS1Q6VY07 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms