Protein–RNA interactions for Protein: Q6UX27

VSTM1, V-set and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1Q6UX27 AL137790.1-201ENST00000634283 177 ntBASIC3.12□□□□□ -1.91
VSTM1Q6UX27 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.12□□□□□ -1.91
VSTM1Q6UX27 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
VSTM1Q6UX27 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
VSTM1Q6UX27 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
VSTM1Q6UX27 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
VSTM1Q6UX27 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
VSTM1Q6UX27 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
VSTM1Q6UX27 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
VSTM1Q6UX27 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
VSTM1Q6UX27 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
VSTM1Q6UX27 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.11□□□□□ -1.91
VSTM1Q6UX27 Y_RNA.112-201ENST00000363250 102 ntBASIC3.11□□□□□ -1.91
VSTM1Q6UX27 SNORA80A-201ENST00000363922 136 ntBASIC3.11□□□□□ -1.91
VSTM1Q6UX27 Y_RNA.202-201ENST00000364083 110 ntBASIC3.11□□□□□ -1.91
VSTM1Q6UX27 SNORA9.2-201ENST00000365361 133 ntBASIC3.11□□□□□ -1.91
VSTM1Q6UX27 RNU1-73P-201ENST00000383971 164 ntBASIC3.11□□□□□ -1.91
VSTM1Q6UX27 Y_RNA.463-201ENST00000384271 102 ntBASIC3.11□□□□□ -1.91
VSTM1Q6UX27 RNU6-72P-201ENST00000384285 79 ntBASIC3.11□□□□□ -1.91
VSTM1Q6UX27 MIR34A-201ENST00000385130 110 ntBASIC3.11□□□□□ -1.91
VSTM1Q6UX27 BX276092.3-201ENST00000424182 230 ntBASIC3.11□□□□□ -1.91
VSTM1Q6UX27 USMG5P1-201ENST00000425964 177 ntBASIC3.11□□□□□ -1.91
VSTM1Q6UX27 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.11□□□□□ -1.91
VSTM1Q6UX27 TOMM20P4-201ENST00000427861 435 ntBASIC3.11□□□□□ -1.91
VSTM1Q6UX27 AL160004.2-201ENST00000432935 350 ntBASIC3.11□□□□□ -1.91
VSTM1Q6UX27 AC008571.1-201ENST00000467232 300 ntBASIC3.11□□□□□ -1.91
VSTM1Q6UX27 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.11□□□□□ -1.91
VSTM1Q6UX27 RPS29P26-201ENST00000477483 171 ntBASIC3.11□□□□□ -1.91
VSTM1Q6UX27 FO393415.2-201ENST00000480085 343 ntBASIC3.11□□□□□ -1.91
VSTM1Q6UX27 AC022493.2-201ENST00000506122 481 ntBASIC3.11□□□□□ -1.91
VSTM1Q6UX27 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.11□□□□□ -1.91
VSTM1Q6UX27 MTCO3P13-201ENST00000577757 781 ntBASIC3.11□□□□□ -1.91
VSTM1Q6UX27 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.11□□□□□ -1.91
VSTM1Q6UX27 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.11□□□□□ -1.91
VSTM1Q6UX27 HSPE1P7-201ENST00000604681 321 ntBASIC3.11□□□□□ -1.91
VSTM1Q6UX27 AC007485.1-201ENST00000616755 206 ntBASIC3.11□□□□□ -1.91
VSTM1Q6UX27 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.11□□□□□ -1.91
VSTM1Q6UX27 AC006386.2-201ENST00000624491 75 ntBASIC3.11□□□□□ -1.91
VSTM1Q6UX27 AC012005.1-201ENST00000624575 75 ntBASIC3.11□□□□□ -1.91
VSTM1Q6UX27 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.1□□□□□ -1.91
VSTM1Q6UX27 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
VSTM1Q6UX27 RPL9P7-201ENST00000330965 580 ntBASIC3.1□□□□□ -1.91
VSTM1Q6UX27 Y_RNA.28-201ENST00000362554 111 ntBASIC3.1□□□□□ -1.91
VSTM1Q6UX27 Y_RNA.148-201ENST00000363557 117 ntBASIC3.1□□□□□ -1.91
VSTM1Q6UX27 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.1□□□□□ -1.91
VSTM1Q6UX27 Y_RNA.496-201ENST00000384444 101 ntBASIC3.1□□□□□ -1.91
VSTM1Q6UX27 RNU6-738P-201ENST00000384531 106 ntBASIC3.1□□□□□ -1.91
VSTM1Q6UX27 MIR518D-201ENST00000385014 87 ntBASIC3.1□□□□□ -1.91
VSTM1Q6UX27 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.1□□□□□ -1.91
VSTM1Q6UX27 RNA5SP344-201ENST00000411081 104 ntBASIC3.1□□□□□ -1.91
VSTM1Q6UX27 AL513043.1-201ENST00000439124 535 ntBASIC3.1□□□□□ -1.91
VSTM1Q6UX27 AC098831.1-201ENST00000440661 216 ntBASIC3.1□□□□□ -1.91
VSTM1Q6UX27 HIGD1AP2-201ENST00000446367 280 ntBASIC3.1□□□□□ -1.91
VSTM1Q6UX27 MTND4P19-201ENST00000446659 478 ntBASIC3.1□□□□□ -1.91
VSTM1Q6UX27 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.1□□□□□ -1.91
VSTM1Q6UX27 RPL9P9-202ENST00000466501 579 ntBASIC3.1□□□□□ -1.91
VSTM1Q6UX27 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.1□□□□□ -1.91
VSTM1Q6UX27 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.1□□□□□ -1.91
VSTM1Q6UX27 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.1□□□□□ -1.91
VSTM1Q6UX27 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.1□□□□□ -1.91
VSTM1Q6UX27 SCGB1D5P-201ENST00000515134 247 ntBASIC3.1□□□□□ -1.91
VSTM1Q6UX27 RNU6-470P-201ENST00000515954 104 ntBASIC3.1□□□□□ -1.91
VSTM1Q6UX27 Y_RNA.661-201ENST00000516003 99 ntBASIC3.1□□□□□ -1.91
VSTM1Q6UX27 RNU6-1137P-201ENST00000517073 99 ntBASIC3.1□□□□□ -1.91
VSTM1Q6UX27 RNU6-699P-201ENST00000517081 110 ntBASIC3.1□□□□□ -1.91
VSTM1Q6UX27 RN7SKP295-201ENST00000517264 153 ntBASIC3.1□□□□□ -1.91
VSTM1Q6UX27 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
VSTM1Q6UX27 DNAJC8P1-201ENST00000554535 372 ntBASIC3.1□□□□□ -1.91
VSTM1Q6UX27 AMZ2P1-203ENST00000565833 850 ntBASIC3.1□□□□□ -1.91
VSTM1Q6UX27 CPDP1-201ENST00000579660 283 ntBASIC3.1□□□□□ -1.91
VSTM1Q6UX27 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
VSTM1Q6UX27 BNIP3P16-201ENST00000589779 534 ntBASIC3.1□□□□□ -1.91
VSTM1Q6UX27 AC020895.1-201ENST00000595362 272 ntBASIC3.1□□□□□ -1.91
VSTM1Q6UX27 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.1□□□□□ -1.91
VSTM1Q6UX27 AC090740.1-201ENST00000623193 2262 ntBASIC3.09□□□□□ -1.91
VSTM1Q6UX27 RNU6-78P-201ENST00000362897 107 ntBASIC3.09□□□□□ -1.91
VSTM1Q6UX27 RNU6-1035P-201ENST00000384477 107 ntBASIC3.09□□□□□ -1.91
VSTM1Q6UX27 AL590004.2-201ENST00000404787 371 ntBASIC3.09□□□□□ -1.91
VSTM1Q6UX27 AL513475.1-201ENST00000406602 315 ntBASIC3.09□□□□□ -1.91
VSTM1Q6UX27 AC113618.1-201ENST00000416747 285 ntBASIC3.09□□□□□ -1.91
VSTM1Q6UX27 HMGN2P30-201ENST00000423237 256 ntBASIC3.09□□□□□ -1.91
VSTM1Q6UX27 TRIAP1P1-201ENST00000427062 225 ntBASIC3.09□□□□□ -1.91
VSTM1Q6UX27 RPL23AP50-201ENST00000434149 455 ntBASIC3.09□□□□□ -1.91
VSTM1Q6UX27 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.09□□□□□ -1.91
VSTM1Q6UX27 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.09□□□□□ -1.91
VSTM1Q6UX27 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
VSTM1Q6UX27 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.09□□□□□ -1.91
VSTM1Q6UX27 RNU6-1037P-201ENST00000459571 107 ntBASIC3.09□□□□□ -1.91
VSTM1Q6UX27 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.09□□□□□ -1.91
VSTM1Q6UX27 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.09□□□□□ -1.91
VSTM1Q6UX27 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.09□□□□□ -1.91
VSTM1Q6UX27 RN7SL633P-201ENST00000488974 297 ntBASIC3.09□□□□□ -1.91
VSTM1Q6UX27 RPS27AP10-201ENST00000496103 208 ntBASIC3.09□□□□□ -1.91
VSTM1Q6UX27 AK3P2-201ENST00000507976 429 ntBASIC3.09□□□□□ -1.91
VSTM1Q6UX27 SCARNA13-201ENST00000516672 275 ntBASIC3.09□□□□□ -1.91
VSTM1Q6UX27 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.09□□□□□ -1.91
VSTM1Q6UX27 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.09□□□□□ -1.91
VSTM1Q6UX27 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.09□□□□□ -1.91
VSTM1Q6UX27 AL137843.1-201ENST00000605078 385 ntBASIC3.09□□□□□ -1.91
VSTM1Q6UX27 MIR7106-201ENST00000612419 65 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 134.1 ms