Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.08□□□□□ -2.4
MRPL54Q6P161 AC126365.2-201ENST00000580630 379 ntBASIC0.08□□□□□ -2.4
MRPL54Q6P161 AC090330.1-201ENST00000588646 764 ntBASIC0.08□□□□□ -2.4
MRPL54Q6P161 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.08□□□□□ -2.4
MRPL54Q6P161 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC0.08□□□□□ -2.4
MRPL54Q6P161 AC092106.3-201ENST00000611308 722 ntBASIC0.08□□□□□ -2.4
MRPL54Q6P161 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.08□□□□□ -2.4
MRPL54Q6P161 AC083806.3-201ENST00000614016 455 ntBASIC0.08□□□□□ -2.4
MRPL54Q6P161 RMST_10.1-201ENST00000616309 154 ntBASIC0.08□□□□□ -2.4
MRPL54Q6P161 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.08□□□□□ -2.4
MRPL54Q6P161 AC099654.9-201ENST00000637055 678 ntBASIC0.08□□□□□ -2.4
MRPL54Q6P161 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.07□□□□□ -2.4
MRPL54Q6P161 snoU2_19.1-201ENST00000362361 80 ntBASIC0.07□□□□□ -2.4
MRPL54Q6P161 RNU6-858P-201ENST00000362436 107 ntBASIC0.07□□□□□ -2.4
MRPL54Q6P161 SNORD56.4-201ENST00000363883 71 ntBASIC0.07□□□□□ -2.4
MRPL54Q6P161 Y_RNA.363-201ENST00000365529 113 ntBASIC0.07□□□□□ -2.4
MRPL54Q6P161 MTCO1P56-201ENST00000401674 224 ntBASIC0.07□□□□□ -2.4
MRPL54Q6P161 RAP1BP3-201ENST00000407180 549 ntBASIC0.07□□□□□ -2.4
MRPL54Q6P161 RNU2-23P-201ENST00000410545 195 ntBASIC0.07□□□□□ -2.4
MRPL54Q6P161 UBE2V1P10-201ENST00000414685 269 ntBASIC0.07□□□□□ -2.4
MRPL54Q6P161 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC0.07□□□□□ -2.4
MRPL54Q6P161 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC0.07□□□□□ -2.4
MRPL54Q6P161 AC245047.7-201ENST00000440265 293 ntBASIC0.07□□□□□ -2.4
MRPL54Q6P161 AC009646.1-201ENST00000510455 318 ntBASIC0.07□□□□□ -2.4
MRPL54Q6P161 AC010587.2-201ENST00000511727 448 ntBASIC0.07□□□□□ -2.4
MRPL54Q6P161 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC0.07□□□□□ -2.4
MRPL54Q6P161 RNA5SP490-201ENST00000517141 136 ntBASIC0.07□□□□□ -2.4
MRPL54Q6P161 AC087854.1-201ENST00000519706 414 ntBASIC0.07□□□□□ -2.4
MRPL54Q6P161 KC877982.1-201ENST00000602313 470 ntBASIC0.07□□□□□ -2.4
MRPL54Q6P161 MIR1322-201ENST00000638013 71 ntBASIC0.07□□□□□ -2.4
MRPL54Q6P161 AC132825.7-201ENST00000638744 335 ntBASIC0.07□□□□□ -2.4
MRPL54Q6P161 RNU6-622P-201ENST00000384272 103 ntBASIC0.06□□□□□ -2.4
MRPL54Q6P161 RNU6-114P-201ENST00000384704 105 ntBASIC0.06□□□□□ -2.4
MRPL54Q6P161 RNU6-575P-201ENST00000411326 105 ntBASIC0.06□□□□□ -2.4
MRPL54Q6P161 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.06□□□□□ -2.4
MRPL54Q6P161 AC092427.1-201ENST00000439177 601 ntBASIC0.06□□□□□ -2.4
MRPL54Q6P161 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC0.06□□□□□ -2.4
MRPL54Q6P161 AC233266.1-201ENST00000454518 96 ntBASIC0.06□□□□□ -2.4
MRPL54Q6P161 MTND1P3-201ENST00000484956 952 ntBASIC0.06□□□□□ -2.4
MRPL54Q6P161 AC022493.2-201ENST00000506122 481 ntBASIC0.06□□□□□ -2.4
MRPL54Q6P161 AC105313.1-201ENST00000509121 353 ntBASIC0.06□□□□□ -2.4
MRPL54Q6P161 AC067942.3-201ENST00000512025 362 ntBASIC0.06□□□□□ -2.4
MRPL54Q6P161 FABP5P5-201ENST00000515537 406 ntBASIC0.06□□□□□ -2.4
MRPL54Q6P161 RNU6-496P-201ENST00000516145 99 ntBASIC0.06□□□□□ -2.4
MRPL54Q6P161 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC0.06□□□□□ -2.4
MRPL54Q6P161 MIR3976-201ENST00000606807 139 ntBASIC0.06□□□□□ -2.4
MRPL54Q6P161 AC242852.1-201ENST00000612151 96 ntBASIC0.06□□□□□ -2.4
MRPL54Q6P161 AC244015.1-201ENST00000622301 99 ntBASIC0.06□□□□□ -2.4
MRPL54Q6P161 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.06□□□□□ -2.4
MRPL54Q6P161 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.06□□□□□ -2.4
MRPL54Q6P161 AC005858.4-201ENST00000623191 700 ntBASIC0.06□□□□□ -2.4
MRPL54Q6P161 SNRPEP3-201ENST00000338402 276 ntBASIC0.05□□□□□ -2.4
MRPL54Q6P161 MIR340-201ENST00000362125 95 ntBASIC0.05□□□□□ -2.4
MRPL54Q6P161 MIRLET7D-201ENST00000362263 87 ntBASIC0.05□□□□□ -2.4
MRPL54Q6P161 SNORA80D-201ENST00000384488 135 ntBASIC0.05□□□□□ -2.4
MRPL54Q6P161 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
MRPL54Q6P161 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
MRPL54Q6P161 MIR1295A-201ENST00000408463 79 ntBASIC0.05□□□□□ -2.4
MRPL54Q6P161 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.05□□□□□ -2.4
MRPL54Q6P161 MTND4P24-201ENST00000424002 397 ntBASIC0.05□□□□□ -2.4
MRPL54Q6P161 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC0.05□□□□□ -2.4
MRPL54Q6P161 FTH1P25-201ENST00000447665 469 ntBASIC0.05□□□□□ -2.4
MRPL54Q6P161 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.05□□□□□ -2.4
MRPL54Q6P161 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC0.05□□□□□ -2.4
MRPL54Q6P161 AC108729.3-201ENST00000513484 108 ntBASIC0.05□□□□□ -2.4
MRPL54Q6P161 AC103833.1-201ENST00000517442 172 ntBASIC0.05□□□□□ -2.4
MRPL54Q6P161 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.05□□□□□ -2.4
MRPL54Q6P161 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.05□□□□□ -2.4
MRPL54Q6P161 MTATP6P3-201ENST00000581686 676 ntBASIC0.05□□□□□ -2.4
MRPL54Q6P161 HMGN1P30-201ENST00000589286 268 ntBASIC0.05□□□□□ -2.4
MRPL54Q6P161 AL391001.1-201ENST00000602747 715 ntBASIC0.05□□□□□ -2.4
MRPL54Q6P161 AC012557.2-201ENST00000605919 418 ntBASIC0.05□□□□□ -2.4
MRPL54Q6P161 AL138726.1-201ENST00000614873 333 ntBASIC0.05□□□□□ -2.4
MRPL54Q6P161 AC063943.3-201ENST00000615562 356 ntBASIC0.05□□□□□ -2.4
MRPL54Q6P161 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.05□□□□□ -2.4
MRPL54Q6P161 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0.04□□□□□ -2.4
MRPL54Q6P161 MIR337-201ENST00000362281 93 ntBASIC0.04□□□□□ -2.4
MRPL54Q6P161 RNU6-1123P-201ENST00000362347 106 ntBASIC0.04□□□□□ -2.4
MRPL54Q6P161 RNU6-1327P-201ENST00000365302 105 ntBASIC0.04□□□□□ -2.4
MRPL54Q6P161 RNU6-16P-201ENST00000384385 107 ntBASIC0.04□□□□□ -2.4
MRPL54Q6P161 AC123900.1-201ENST00000420390 96 ntBASIC0.04□□□□□ -2.4
MRPL54Q6P161 MTCYBP1-201ENST00000454315 1119 ntBASIC0.04□□□□□ -2.4
MRPL54Q6P161 SNORA31.3-201ENST00000516029 96 ntBASIC0.04□□□□□ -2.4
MRPL54Q6P161 BNIP3P6-201ENST00000549284 499 ntBASIC0.04□□□□□ -2.4
MRPL54Q6P161 BNIP3P8-201ENST00000597863 560 ntBASIC0.04□□□□□ -2.4
MRPL54Q6P161 AC016727.2-201ENST00000603988 621 ntBASIC0.04□□□□□ -2.4
MRPL54Q6P161 AC021506.2-201ENST00000612354 169 ntBASIC0.04□□□□□ -2.4
MRPL54Q6P161 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
MRPL54Q6P161 OR4G1P-203ENST00000641984 1631 ntBASIC0.03□□□□□ -2.4
MRPL54Q6P161 RNU6-97P-201ENST00000363387 104 ntBASIC0.03□□□□□ -2.4
MRPL54Q6P161 RNU6-1335P-201ENST00000365426 107 ntBASIC0.03□□□□□ -2.4
MRPL54Q6P161 MIR216A-201ENST00000385063 110 ntBASIC0.03□□□□□ -2.4
MRPL54Q6P161 COX6CP10-201ENST00000416832 224 ntBASIC0.03□□□□□ -2.4
MRPL54Q6P161 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.03□□□□□ -2.4
MRPL54Q6P161 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.03□□□□□ -2.4
MRPL54Q6P161 MTCO3P29-201ENST00000432119 779 ntBASIC0.03□□□□□ -2.4
MRPL54Q6P161 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.03□□□□□ -2.4
MRPL54Q6P161 RPEP5-201ENST00000441137 268 ntBASIC0.03□□□□□ -2.4
MRPL54Q6P161 AC069257.2-201ENST00000441819 155 ntBASIC0.03□□□□□ -2.4
MRPL54Q6P161 AL606662.1-201ENST00000445763 553 ntBASIC0.03□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms