Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 AL356157.2-201ENST00000605122 111 ntBASIC4.84□□□□□ -1.63
RNF20Q5VTR2 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC4.84□□□□□ -1.63
RNF20Q5VTR2 AC010999.1-201ENST00000611856 324 ntBASIC4.84□□□□□ -1.63
RNF20Q5VTR2 U2.21-201ENST00000637295 81 ntBASIC4.84□□□□□ -1.63
RNF20Q5VTR2 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
RNF20Q5VTR2 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC4.84□□□□□ -1.64
RNF20Q5VTR2 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.84□□□□□ -1.64
RNF20Q5VTR2 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
RNF20Q5VTR2 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
RNF20Q5VTR2 RNU6-653P-201ENST00000363074 106 ntBASIC4.83□□□□□ -1.64
RNF20Q5VTR2 RNU6-778P-201ENST00000363269 103 ntBASIC4.83□□□□□ -1.64
RNF20Q5VTR2 RNA5SP197-201ENST00000363357 119 ntBASIC4.83□□□□□ -1.64
RNF20Q5VTR2 RNU1-100P-201ENST00000365255 165 ntBASIC4.83□□□□□ -1.64
RNF20Q5VTR2 Y_RNA.580-201ENST00000391004 95 ntBASIC4.83□□□□□ -1.64
RNF20Q5VTR2 RNU6-1197P-201ENST00000391183 107 ntBASIC4.83□□□□□ -1.64
RNF20Q5VTR2 HSPE1P12-201ENST00000412576 301 ntBASIC4.83□□□□□ -1.64
RNF20Q5VTR2 AC125238.1-201ENST00000448842 249 ntBASIC4.83□□□□□ -1.64
RNF20Q5VTR2 AC016632.1-201ENST00000503994 196 ntBASIC4.83□□□□□ -1.64
RNF20Q5VTR2 RNU5F-8P-201ENST00000515941 111 ntBASIC4.83□□□□□ -1.64
RNF20Q5VTR2 RNU6-191P-201ENST00000516295 94 ntBASIC4.83□□□□□ -1.64
RNF20Q5VTR2 RNU6-313P-201ENST00000516317 112 ntBASIC4.83□□□□□ -1.64
RNF20Q5VTR2 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RNF20Q5VTR2 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC4.83□□□□□ -1.64
RNF20Q5VTR2 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.83□□□□□ -1.64
RNF20Q5VTR2 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.83□□□□□ -1.64
RNF20Q5VTR2 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RNF20Q5VTR2 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
RNF20Q5VTR2 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RNF20Q5VTR2 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.82□□□□□ -1.64
RNF20Q5VTR2 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
RNF20Q5VTR2 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RNF20Q5VTR2 RNU6-449P-201ENST00000383914 107 ntBASIC4.82□□□□□ -1.64
RNF20Q5VTR2 RNU1-73P-201ENST00000383971 164 ntBASIC4.82□□□□□ -1.64
RNF20Q5VTR2 Y_RNA.571-201ENST00000384753 98 ntBASIC4.82□□□□□ -1.64
RNF20Q5VTR2 FTH1P15-201ENST00000406984 280 ntBASIC4.82□□□□□ -1.64
RNF20Q5VTR2 HMGN2P30-201ENST00000423237 256 ntBASIC4.82□□□□□ -1.64
RNF20Q5VTR2 RPS15AP5-201ENST00000436276 388 ntBASIC4.82□□□□□ -1.64
RNF20Q5VTR2 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.82□□□□□ -1.64
RNF20Q5VTR2 RPL31P61-201ENST00000496160 376 ntBASIC4.82□□□□□ -1.64
RNF20Q5VTR2 MIR5692C2-201ENST00000577959 77 ntBASIC4.82□□□□□ -1.64
RNF20Q5VTR2 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.82□□□□□ -1.64
RNF20Q5VTR2 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.82□□□□□ -1.64
RNF20Q5VTR2 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.82□□□□□ -1.64
RNF20Q5VTR2 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.82□□□□□ -1.64
RNF20Q5VTR2 AL136964.1-201ENST00000622038 2990 ntBASIC4.82□□□□□ -1.64
RNF20Q5VTR2 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
RNF20Q5VTR2 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
RNF20Q5VTR2 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
RNF20Q5VTR2 Y_RNA.101-201ENST00000363154 102 ntBASIC4.81□□□□□ -1.64
RNF20Q5VTR2 SNORD115-8-201ENST00000363856 82 ntBASIC4.81□□□□□ -1.64
RNF20Q5VTR2 SNORD115-38-201ENST00000365037 82 ntBASIC4.81□□□□□ -1.64
RNF20Q5VTR2 MIR3074-201ENST00000384885 81 ntBASIC4.81□□□□□ -1.64
RNF20Q5VTR2 AL357075.1-201ENST00000404107 726 ntBASIC4.81□□□□□ -1.64
RNF20Q5VTR2 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.81□□□□□ -1.64
RNF20Q5VTR2 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC4.81□□□□□ -1.64
RNF20Q5VTR2 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC4.81□□□□□ -1.64
RNF20Q5VTR2 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.81□□□□□ -1.64
RNF20Q5VTR2 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.81□□□□□ -1.64
RNF20Q5VTR2 AP000705.1-201ENST00000454567 350 ntBASIC4.81□□□□□ -1.64
RNF20Q5VTR2 RNU6-625P-201ENST00000459412 107 ntBASIC4.81□□□□□ -1.64
RNF20Q5VTR2 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC4.81□□□□□ -1.64
RNF20Q5VTR2 RNU6-479P-201ENST00000516348 105 ntBASIC4.81□□□□□ -1.64
RNF20Q5VTR2 AL359198.2-201ENST00000611836 194 ntBASIC4.81□□□□□ -1.64
RNF20Q5VTR2 AC004825.2-201ENST00000616634 455 ntBASIC4.81□□□□□ -1.64
RNF20Q5VTR2 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
RNF20Q5VTR2 AC092593.1-201ENST00000515413 1815 ntBASIC4.81□□□□□ -1.64
RNF20Q5VTR2 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
RNF20Q5VTR2 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNF20Q5VTR2 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNF20Q5VTR2 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.8□□□□□ -1.64
RNF20Q5VTR2 RNU6-884P-201ENST00000363889 107 ntBASIC4.8□□□□□ -1.64
RNF20Q5VTR2 SNORA7.2-201ENST00000364446 145 ntBASIC4.8□□□□□ -1.64
RNF20Q5VTR2 RNU6-1279P-201ENST00000383917 103 ntBASIC4.8□□□□□ -1.64
RNF20Q5VTR2 SNORA56-201ENST00000383966 129 ntBASIC4.8□□□□□ -1.64
RNF20Q5VTR2 RNU6-217P-201ENST00000384164 104 ntBASIC4.8□□□□□ -1.64
RNF20Q5VTR2 Y_RNA.488-201ENST00000384403 102 ntBASIC4.8□□□□□ -1.64
RNF20Q5VTR2 SNORA22C-201ENST00000384614 134 ntBASIC4.8□□□□□ -1.64
RNF20Q5VTR2 MIR549A-201ENST00000385268 96 ntBASIC4.8□□□□□ -1.64
RNF20Q5VTR2 RNU2-2P-201ENST00000410396 191 ntBASIC4.8□□□□□ -1.64
RNF20Q5VTR2 RPL37P4-201ENST00000448908 268 ntBASIC4.8□□□□□ -1.64
RNF20Q5VTR2 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC4.8□□□□□ -1.64
RNF20Q5VTR2 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC4.8□□□□□ -1.64
RNF20Q5VTR2 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.8□□□□□ -1.64
RNF20Q5VTR2 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.8□□□□□ -1.64
RNF20Q5VTR2 CYCSP29-201ENST00000533731 318 ntBASIC4.8□□□□□ -1.64
RNF20Q5VTR2 CR383656.8-201ENST00000549046 145 ntBASIC4.8□□□□□ -1.64
RNF20Q5VTR2 RN7SL600P-201ENST00000581811 299 ntBASIC4.8□□□□□ -1.64
RNF20Q5VTR2 MIR3939-201ENST00000582614 106 ntBASIC4.8□□□□□ -1.64
RNF20Q5VTR2 RNU2-4P-201ENST00000606190 192 ntBASIC4.8□□□□□ -1.64
RNF20Q5VTR2 U2.15-201ENST00000611544 191 ntBASIC4.8□□□□□ -1.64
RNF20Q5VTR2 U2.16-201ENST00000613119 191 ntBASIC4.8□□□□□ -1.64
RNF20Q5VTR2 U2.12-201ENST00000613778 191 ntBASIC4.8□□□□□ -1.64
RNF20Q5VTR2 U2.9-201ENST00000615427 191 ntBASIC4.8□□□□□ -1.64
RNF20Q5VTR2 U2.11-201ENST00000616345 191 ntBASIC4.8□□□□□ -1.64
RNF20Q5VTR2 U2.2-201ENST00000616535 191 ntBASIC4.8□□□□□ -1.64
RNF20Q5VTR2 U2.3-201ENST00000617785 191 ntBASIC4.8□□□□□ -1.64
RNF20Q5VTR2 U2.19-201ENST00000618602 191 ntBASIC4.8□□□□□ -1.64
RNF20Q5VTR2 RNU2-1-201ENST00000618664 191 ntBASIC4.8□□□□□ -1.64
RNF20Q5VTR2 U2.6-201ENST00000619225 191 ntBASIC4.8□□□□□ -1.64
RNF20Q5VTR2 U2.5-201ENST00000619465 191 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms