Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
COL13A1Q5TAT6 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
COL13A1Q5TAT6 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
COL13A1Q5TAT6 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
COL13A1Q5TAT6 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
COL13A1Q5TAT6 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
COL13A1Q5TAT6 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
COL13A1Q5TAT6 RNA5SP361-201ENST00000362686 118 ntBASIC4.41□□□□□ -1.7
COL13A1Q5TAT6 RNU6-942P-201ENST00000363002 107 ntBASIC4.41□□□□□ -1.7
COL13A1Q5TAT6 MIR10B-201ENST00000385011 110 ntBASIC4.41□□□□□ -1.7
COL13A1Q5TAT6 MIR518D-201ENST00000385014 87 ntBASIC4.41□□□□□ -1.7
COL13A1Q5TAT6 RNU6-918P-201ENST00000391219 106 ntBASIC4.41□□□□□ -1.7
COL13A1Q5TAT6 RPL23AP36-201ENST00000413895 458 ntBASIC4.41□□□□□ -1.7
COL13A1Q5TAT6 TOMM22P1-201ENST00000418578 312 ntBASIC4.41□□□□□ -1.7
COL13A1Q5TAT6 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.41□□□□□ -1.7
COL13A1Q5TAT6 SNORD2.1-201ENST00000458762 69 ntBASIC4.41□□□□□ -1.7
COL13A1Q5TAT6 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC4.41□□□□□ -1.7
COL13A1Q5TAT6 RNU6-567P-201ENST00000516746 107 ntBASIC4.41□□□□□ -1.7
COL13A1Q5TAT6 AC022559.1-201ENST00000520905 205 ntBASIC4.41□□□□□ -1.7
COL13A1Q5TAT6 MRPS18CP4-201ENST00000535821 231 ntBASIC4.41□□□□□ -1.7
COL13A1Q5TAT6 AC091544.4-201ENST00000555268 342 ntBASIC4.41□□□□□ -1.7
COL13A1Q5TAT6 MIR3144-201ENST00000579460 79 ntBASIC4.41□□□□□ -1.7
COL13A1Q5TAT6 MIR4435-1-201ENST00000582552 80 ntBASIC4.41□□□□□ -1.7
COL13A1Q5TAT6 AC008749.1-201ENST00000597650 306 ntBASIC4.41□□□□□ -1.7
COL13A1Q5TAT6 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.41□□□□□ -1.7
COL13A1Q5TAT6 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
COL13A1Q5TAT6 AC126323.6-202ENST00000568092 3511 ntBASIC4.41□□□□□ -1.7
COL13A1Q5TAT6 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
COL13A1Q5TAT6 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
COL13A1Q5TAT6 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.41□□□□□ -1.7
COL13A1Q5TAT6 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
COL13A1Q5TAT6 AC090740.1-201ENST00000623193 2262 ntBASIC4.41□□□□□ -1.7
COL13A1Q5TAT6 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
COL13A1Q5TAT6 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.4□□□□□ -1.7
COL13A1Q5TAT6 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.4□□□□□ -1.7
COL13A1Q5TAT6 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
COL13A1Q5TAT6 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.7
COL13A1Q5TAT6 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
COL13A1Q5TAT6 RNA5SP197-201ENST00000363357 119 ntBASIC4.4□□□□□ -1.71
COL13A1Q5TAT6 RNU5F-3P-201ENST00000363767 117 ntBASIC4.4□□□□□ -1.71
COL13A1Q5TAT6 SNORD115-8-201ENST00000363856 82 ntBASIC4.4□□□□□ -1.71
COL13A1Q5TAT6 SNORD32A-201ENST00000364805 84 ntBASIC4.4□□□□□ -1.71
COL13A1Q5TAT6 SNORD115-38-201ENST00000365037 82 ntBASIC4.4□□□□□ -1.71
COL13A1Q5TAT6 RNU6-81P-201ENST00000365608 104 ntBASIC4.4□□□□□ -1.71
COL13A1Q5TAT6 RNU6-1145P-201ENST00000384246 107 ntBASIC4.4□□□□□ -1.71
COL13A1Q5TAT6 RNU6-159P-201ENST00000391080 106 ntBASIC4.4□□□□□ -1.71
COL13A1Q5TAT6 RNU6-394P-201ENST00000410735 107 ntBASIC4.4□□□□□ -1.71
COL13A1Q5TAT6 RPL26P27-201ENST00000414397 437 ntBASIC4.4□□□□□ -1.71
COL13A1Q5TAT6 AC107083.1-201ENST00000439643 279 ntBASIC4.4□□□□□ -1.71
COL13A1Q5TAT6 RNU6-1282P-201ENST00000516735 96 ntBASIC4.4□□□□□ -1.71
COL13A1Q5TAT6 AC015912.2-201ENST00000571053 181 ntBASIC4.4□□□□□ -1.71
COL13A1Q5TAT6 AC108706.1-201ENST00000611053 297 ntBASIC4.4□□□□□ -1.71
COL13A1Q5TAT6 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
COL13A1Q5TAT6 AC022336.2-201ENST00000568966 2538 ntBASIC4.4□□□□□ -1.71
COL13A1Q5TAT6 AL672167.1-204ENST00000641875 3017 ntBASIC4.4□□□□□ -1.71
COL13A1Q5TAT6 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
COL13A1Q5TAT6 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
COL13A1Q5TAT6 AC008725.1-201ENST00000605123 2263 ntBASIC4.39□□□□□ -1.71
COL13A1Q5TAT6 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
COL13A1Q5TAT6 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
COL13A1Q5TAT6 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.39□□□□□ -1.71
COL13A1Q5TAT6 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.39□□□□□ -1.71
COL13A1Q5TAT6 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
COL13A1Q5TAT6 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
COL13A1Q5TAT6 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.39□□□□□ -1.71
COL13A1Q5TAT6 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
COL13A1Q5TAT6 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.39□□□□□ -1.71
COL13A1Q5TAT6 RNU4-82P-201ENST00000362443 140 ntBASIC4.39□□□□□ -1.71
COL13A1Q5TAT6 RNU1-108P-201ENST00000362556 161 ntBASIC4.39□□□□□ -1.71
COL13A1Q5TAT6 Z98749.2-208ENST00000381646 500 ntBASIC4.39□□□□□ -1.71
COL13A1Q5TAT6 Y_RNA.383-201ENST00000383855 97 ntBASIC4.39□□□□□ -1.71
COL13A1Q5TAT6 RNU6-20P-201ENST00000384106 107 ntBASIC4.39□□□□□ -1.71
COL13A1Q5TAT6 U8.10-201ENST00000384260 133 ntBASIC4.39□□□□□ -1.71
COL13A1Q5TAT6 RNU6-1289P-201ENST00000384431 106 ntBASIC4.39□□□□□ -1.71
COL13A1Q5TAT6 MIR708-201ENST00000390708 88 ntBASIC4.39□□□□□ -1.71
COL13A1Q5TAT6 POLR2KP2-201ENST00000438155 177 ntBASIC4.39□□□□□ -1.71
COL13A1Q5TAT6 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
COL13A1Q5TAT6 RPL23AP14-201ENST00000468281 468 ntBASIC4.39□□□□□ -1.71
COL13A1Q5TAT6 S100A11P1-201ENST00000477525 312 ntBASIC4.39□□□□□ -1.71
COL13A1Q5TAT6 BTF3L4P4-201ENST00000506381 449 ntBASIC4.39□□□□□ -1.71
COL13A1Q5TAT6 SNORA40.9-201ENST00000515895 93 ntBASIC4.39□□□□□ -1.71
COL13A1Q5TAT6 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.39□□□□□ -1.71
COL13A1Q5TAT6 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.39□□□□□ -1.71
COL13A1Q5TAT6 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
COL13A1Q5TAT6 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.39□□□□□ -1.71
COL13A1Q5TAT6 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC4.39□□□□□ -1.71
COL13A1Q5TAT6 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.39□□□□□ -1.71
COL13A1Q5TAT6 MIR5680-201ENST00000577577 84 ntBASIC4.39□□□□□ -1.71
COL13A1Q5TAT6 MIR5571-201ENST00000577998 113 ntBASIC4.39□□□□□ -1.71
COL13A1Q5TAT6 MIR5695-201ENST00000579717 85 ntBASIC4.39□□□□□ -1.71
COL13A1Q5TAT6 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC4.39□□□□□ -1.71
COL13A1Q5TAT6 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.39□□□□□ -1.71
COL13A1Q5TAT6 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
COL13A1Q5TAT6 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL13A1Q5TAT6 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL13A1Q5TAT6 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL13A1Q5TAT6 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.38□□□□□ -1.71
COL13A1Q5TAT6 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
COL13A1Q5TAT6 SNORA7.2-201ENST00000364446 145 ntBASIC4.38□□□□□ -1.71
COL13A1Q5TAT6 RNU6-1175P-201ENST00000365200 107 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms