Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 RPL23AP95-201ENST00000426806 265 ntBASIC3.84□□□□□ -1.79
CCDC144BQ3MJ40 RPL23AP22-201ENST00000437556 453 ntBASIC3.84□□□□□ -1.79
CCDC144BQ3MJ40 RPL30P15-201ENST00000457129 321 ntBASIC3.84□□□□□ -1.79
CCDC144BQ3MJ40 HMGN1P18-201ENST00000457642 277 ntBASIC3.84□□□□□ -1.79
CCDC144BQ3MJ40 AC016632.1-201ENST00000503994 196 ntBASIC3.84□□□□□ -1.79
CCDC144BQ3MJ40 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.84□□□□□ -1.79
CCDC144BQ3MJ40 RNU6-1170P-201ENST00000515974 106 ntBASIC3.84□□□□□ -1.79
CCDC144BQ3MJ40 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.84□□□□□ -1.79
CCDC144BQ3MJ40 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.84□□□□□ -1.79
CCDC144BQ3MJ40 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.84□□□□□ -1.79
CCDC144BQ3MJ40 AL050343.2-201ENST00000607338 280 ntBASIC3.84□□□□□ -1.79
CCDC144BQ3MJ40 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.84□□□□□ -1.8
CCDC144BQ3MJ40 AL021368.2-201ENST00000606125 5352 ntBASIC3.84□□□□□ -1.8
CCDC144BQ3MJ40 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
CCDC144BQ3MJ40 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.83□□□□□ -1.8
CCDC144BQ3MJ40 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
CCDC144BQ3MJ40 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CCDC144BQ3MJ40 SNORD56.3-201ENST00000363507 71 ntBASIC3.83□□□□□ -1.8
CCDC144BQ3MJ40 U3.6-201ENST00000363622 211 ntBASIC3.83□□□□□ -1.8
CCDC144BQ3MJ40 Y_RNA.187-201ENST00000363918 113 ntBASIC3.83□□□□□ -1.8
CCDC144BQ3MJ40 SNORD32A-201ENST00000364805 84 ntBASIC3.83□□□□□ -1.8
CCDC144BQ3MJ40 RNU6-805P-201ENST00000365643 106 ntBASIC3.83□□□□□ -1.8
CCDC144BQ3MJ40 RNU6-842P-201ENST00000384269 107 ntBASIC3.83□□□□□ -1.8
CCDC144BQ3MJ40 RNU6-43P-201ENST00000384302 107 ntBASIC3.83□□□□□ -1.8
CCDC144BQ3MJ40 RN7SKP61-201ENST00000410642 295 ntBASIC3.83□□□□□ -1.8
CCDC144BQ3MJ40 AC097463.2-201ENST00000421074 142 ntBASIC3.83□□□□□ -1.8
CCDC144BQ3MJ40 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC144BQ3MJ40 AL031659.1-201ENST00000447075 539 ntBASIC3.83□□□□□ -1.8
CCDC144BQ3MJ40 ELOCP24-201ENST00000456370 334 ntBASIC3.83□□□□□ -1.8
CCDC144BQ3MJ40 RNU7-152P-201ENST00000458982 64 ntBASIC3.83□□□□□ -1.8
CCDC144BQ3MJ40 CENPBD1P1-201ENST00000464061 469 ntBASIC3.83□□□□□ -1.8
CCDC144BQ3MJ40 RPL30P12-201ENST00000474666 353 ntBASIC3.83□□□□□ -1.8
CCDC144BQ3MJ40 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC144BQ3MJ40 SNORA70.19-201ENST00000516717 90 ntBASIC3.83□□□□□ -1.8
CCDC144BQ3MJ40 SCARNA20.6-201ENST00000517251 106 ntBASIC3.83□□□□□ -1.8
CCDC144BQ3MJ40 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.83□□□□□ -1.8
CCDC144BQ3MJ40 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC144BQ3MJ40 AL160413.1-201ENST00000622780 310 ntBASIC3.83□□□□□ -1.8
CCDC144BQ3MJ40 MIR7153-201ENST00000637758 57 ntBASIC3.83□□□□□ -1.8
CCDC144BQ3MJ40 MTND5P10-201ENST00000603719 1809 ntBASIC3.83□□□□□ -1.8
CCDC144BQ3MJ40 PWAR6-201ENST00000552334 4618 ntBASIC3.83□□□□□ -1.8
CCDC144BQ3MJ40 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
CCDC144BQ3MJ40 MTND5P9-201ENST00000503854 1755 ntBASIC3.82□□□□□ -1.8
CCDC144BQ3MJ40 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.82□□□□□ -1.8
CCDC144BQ3MJ40 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC144BQ3MJ40 AC092268.1-201ENST00000342691 405 ntBASIC3.82□□□□□ -1.8
CCDC144BQ3MJ40 RNU6-486P-201ENST00000363116 107 ntBASIC3.82□□□□□ -1.8
CCDC144BQ3MJ40 Y_RNA.123-201ENST00000363338 102 ntBASIC3.82□□□□□ -1.8
CCDC144BQ3MJ40 Y_RNA.146-201ENST00000363549 102 ntBASIC3.82□□□□□ -1.8
CCDC144BQ3MJ40 RNU4-76P-201ENST00000364509 141 ntBASIC3.82□□□□□ -1.8
CCDC144BQ3MJ40 RNU6-310P-201ENST00000384655 107 ntBASIC3.82□□□□□ -1.8
CCDC144BQ3MJ40 UBA52P6-201ENST00000399822 382 ntBASIC3.82□□□□□ -1.8
CCDC144BQ3MJ40 Z98742.2-201ENST00000431564 187 ntBASIC3.82□□□□□ -1.8
CCDC144BQ3MJ40 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC144BQ3MJ40 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.82□□□□□ -1.8
CCDC144BQ3MJ40 RPL7P42-201ENST00000481005 679 ntBASIC3.82□□□□□ -1.8
CCDC144BQ3MJ40 AC104564.1-201ENST00000493028 407 ntBASIC3.82□□□□□ -1.8
CCDC144BQ3MJ40 SCARNA17.1-201ENST00000516211 143 ntBASIC3.82□□□□□ -1.8
CCDC144BQ3MJ40 SNORA31.6-201ENST00000516241 130 ntBASIC3.82□□□□□ -1.8
CCDC144BQ3MJ40 SCARNA17.2-201ENST00000516334 143 ntBASIC3.82□□□□□ -1.8
CCDC144BQ3MJ40 SNORA64.4-201ENST00000516632 81 ntBASIC3.82□□□□□ -1.8
CCDC144BQ3MJ40 HSPE1P4-201ENST00000550617 308 ntBASIC3.82□□□□□ -1.8
CCDC144BQ3MJ40 AC007375.1-201ENST00000554513 578 ntBASIC3.82□□□□□ -1.8
CCDC144BQ3MJ40 7SK.7-201ENST00000603504 247 ntBASIC3.82□□□□□ -1.8
CCDC144BQ3MJ40 AL162713.1-201ENST00000604480 262 ntBASIC3.82□□□□□ -1.8
CCDC144BQ3MJ40 AL137843.1-201ENST00000605078 385 ntBASIC3.82□□□□□ -1.8
CCDC144BQ3MJ40 SCARNA17.4-201ENST00000614296 143 ntBASIC3.82□□□□□ -1.8
CCDC144BQ3MJ40 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC144BQ3MJ40 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.82□□□□□ -1.8
CCDC144BQ3MJ40 AC006026.1-201ENST00000444025 1803 ntBASIC3.81□□□□□ -1.8
CCDC144BQ3MJ40 AL079305.1-201ENST00000623159 3008 ntBASIC3.81□□□□□ -1.8
CCDC144BQ3MJ40 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC144BQ3MJ40 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.81□□□□□ -1.8
CCDC144BQ3MJ40 OR56A5-201ENST00000340110 738 ntBASIC3.81□□□□□ -1.8
CCDC144BQ3MJ40 MIR148B-201ENST00000362252 99 ntBASIC3.81□□□□□ -1.8
CCDC144BQ3MJ40 RNA5SP197-201ENST00000363357 119 ntBASIC3.81□□□□□ -1.8
CCDC144BQ3MJ40 RNU6-1059P-201ENST00000363752 98 ntBASIC3.81□□□□□ -1.8
CCDC144BQ3MJ40 SNORA68.1-201ENST00000364537 132 ntBASIC3.81□□□□□ -1.8
CCDC144BQ3MJ40 SNORD21-201ENST00000383953 95 ntBASIC3.81□□□□□ -1.8
CCDC144BQ3MJ40 SNORA41-201ENST00000384675 132 ntBASIC3.81□□□□□ -1.8
CCDC144BQ3MJ40 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC144BQ3MJ40 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.81□□□□□ -1.8
CCDC144BQ3MJ40 RPL23AP50-201ENST00000434149 455 ntBASIC3.81□□□□□ -1.8
CCDC144BQ3MJ40 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC144BQ3MJ40 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC144BQ3MJ40 snoU13.14-201ENST00000459372 104 ntBASIC3.81□□□□□ -1.8
CCDC144BQ3MJ40 RPS27P29-201ENST00000463110 252 ntBASIC3.81□□□□□ -1.8
CCDC144BQ3MJ40 AC112771.1-201ENST00000463581 102 ntBASIC3.81□□□□□ -1.8
CCDC144BQ3MJ40 AC110794.1-201ENST00000505816 425 ntBASIC3.81□□□□□ -1.8
CCDC144BQ3MJ40 RNU1-143P-201ENST00000516296 146 ntBASIC3.81□□□□□ -1.8
CCDC144BQ3MJ40 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.81□□□□□ -1.8
CCDC144BQ3MJ40 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.81□□□□□ -1.8
CCDC144BQ3MJ40 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CCDC144BQ3MJ40 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC144BQ3MJ40 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC144BQ3MJ40 AC010620.2-201ENST00000600135 313 ntBASIC3.81□□□□□ -1.8
CCDC144BQ3MJ40 AC073410.2-201ENST00000603240 332 ntBASIC3.81□□□□□ -1.8
CCDC144BQ3MJ40 U1.23-201ENST00000610293 146 ntBASIC3.81□□□□□ -1.8
CCDC144BQ3MJ40 RNU1-68P-201ENST00000615382 146 ntBASIC3.81□□□□□ -1.8
CCDC144BQ3MJ40 U1.39-201ENST00000621562 146 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms