Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
RFX4Q33E94 HAUS6P2-201ENST00000433254 2404 ntBASIC1.74□□□□□ -2.13
RFX4Q33E94 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.73□□□□□ -2.13
RFX4Q33E94 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.73□□□□□ -2.13
RFX4Q33E94 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
RFX4Q33E94 GSTA9P-201ENST00000406231 611 ntBASIC1.73□□□□□ -2.13
RFX4Q33E94 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.73□□□□□ -2.13
RFX4Q33E94 RNU2-2P-201ENST00000410396 191 ntBASIC1.73□□□□□ -2.13
RFX4Q33E94 RNU4-46P-201ENST00000410818 138 ntBASIC1.73□□□□□ -2.13
RFX4Q33E94 RN7SKP192-201ENST00000411291 327 ntBASIC1.73□□□□□ -2.13
RFX4Q33E94 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.73□□□□□ -2.13
RFX4Q33E94 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.73□□□□□ -2.13
RFX4Q33E94 EDDM3CP-201ENST00000415977 425 ntBASIC1.73□□□□□ -2.13
RFX4Q33E94 AC138623.1-201ENST00000418060 216 ntBASIC1.73□□□□□ -2.13
RFX4Q33E94 AL353193.1-201ENST00000421444 268 ntBASIC1.73□□□□□ -2.13
RFX4Q33E94 MTCO2P19-201ENST00000427513 598 ntBASIC1.73□□□□□ -2.13
RFX4Q33E94 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.73□□□□□ -2.13
RFX4Q33E94 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.73□□□□□ -2.13
RFX4Q33E94 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.73□□□□□ -2.13
RFX4Q33E94 AC022364.2-201ENST00000457963 554 ntBASIC1.73□□□□□ -2.13
RFX4Q33E94 RPL31P3-201ENST00000458430 332 ntBASIC1.73□□□□□ -2.13
RFX4Q33E94 AC018868.1-201ENST00000491307 315 ntBASIC1.73□□□□□ -2.13
RFX4Q33E94 RNU2-69P-201ENST00000516061 100 ntBASIC1.73□□□□□ -2.13
RFX4Q33E94 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.73□□□□□ -2.13
RFX4Q33E94 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.73□□□□□ -2.13
RFX4Q33E94 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.73□□□□□ -2.13
RFX4Q33E94 AC093249.1-201ENST00000567049 203 ntBASIC1.73□□□□□ -2.13
RFX4Q33E94 MIR3618-201ENST00000580330 88 ntBASIC1.73□□□□□ -2.13
RFX4Q33E94 MIR5583-1-201ENST00000580941 59 ntBASIC1.73□□□□□ -2.13
RFX4Q33E94 MTATP6P3-201ENST00000581686 676 ntBASIC1.73□□□□□ -2.13
RFX4Q33E94 RPL30P11-203ENST00000598995 310 ntBASIC1.73□□□□□ -2.13
RFX4Q33E94 AC073410.2-201ENST00000603240 332 ntBASIC1.73□□□□□ -2.13
RFX4Q33E94 SNRPGP19-201ENST00000603826 189 ntBASIC1.73□□□□□ -2.13
RFX4Q33E94 AC123912.5-201ENST00000605470 343 ntBASIC1.73□□□□□ -2.13
RFX4Q33E94 AP001596.2-201ENST00000608410 312 ntBASIC1.73□□□□□ -2.13
RFX4Q33E94 AC096772.1-201ENST00000609146 564 ntBASIC1.73□□□□□ -2.13
RFX4Q33E94 U2.15-201ENST00000611544 191 ntBASIC1.73□□□□□ -2.13
RFX4Q33E94 U2.16-201ENST00000613119 191 ntBASIC1.73□□□□□ -2.13
RFX4Q33E94 U2.12-201ENST00000613778 191 ntBASIC1.73□□□□□ -2.13
RFX4Q33E94 U2.20-201ENST00000613956 192 ntBASIC1.73□□□□□ -2.13
RFX4Q33E94 U2.9-201ENST00000615427 191 ntBASIC1.73□□□□□ -2.13
RFX4Q33E94 U2.11-201ENST00000616345 191 ntBASIC1.73□□□□□ -2.13
RFX4Q33E94 U2.2-201ENST00000616535 191 ntBASIC1.73□□□□□ -2.13
RFX4Q33E94 U2.3-201ENST00000617785 191 ntBASIC1.73□□□□□ -2.13
RFX4Q33E94 U2.19-201ENST00000618602 191 ntBASIC1.73□□□□□ -2.13
RFX4Q33E94 RNU2-1-201ENST00000618664 191 ntBASIC1.73□□□□□ -2.13
RFX4Q33E94 U2.6-201ENST00000619225 191 ntBASIC1.73□□□□□ -2.13
RFX4Q33E94 U2.5-201ENST00000619465 191 ntBASIC1.73□□□□□ -2.13
RFX4Q33E94 U2.10-201ENST00000620268 191 ntBASIC1.73□□□□□ -2.13
RFX4Q33E94 Z69720.2-201ENST00000624755 279 ntBASIC1.73□□□□□ -2.13
RFX4Q33E94 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
RFX4Q33E94 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
RFX4Q33E94 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
RFX4Q33E94 AC008555.8-201ENST00000623602 2168 ntBASIC1.72□□□□□ -2.13
RFX4Q33E94 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
RFX4Q33E94 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.72□□□□□ -2.13
RFX4Q33E94 SNORD56.1-201ENST00000362913 68 ntBASIC1.72□□□□□ -2.13
RFX4Q33E94 RNU6-1159P-201ENST00000362933 107 ntBASIC1.72□□□□□ -2.13
RFX4Q33E94 RNU1-23P-201ENST00000363361 144 ntBASIC1.72□□□□□ -2.13
RFX4Q33E94 Y_RNA.381-201ENST00000365666 102 ntBASIC1.72□□□□□ -2.13
RFX4Q33E94 RAP1BP3-201ENST00000407180 549 ntBASIC1.72□□□□□ -2.13
RFX4Q33E94 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.72□□□□□ -2.13
RFX4Q33E94 RNU2-20P-201ENST00000410425 191 ntBASIC1.72□□□□□ -2.13
RFX4Q33E94 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.72□□□□□ -2.13
RFX4Q33E94 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.72□□□□□ -2.13
RFX4Q33E94 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
RFX4Q33E94 AC096920.1-201ENST00000423991 241 ntBASIC1.72□□□□□ -2.13
RFX4Q33E94 AL353689.1-201ENST00000438895 199 ntBASIC1.72□□□□□ -2.13
RFX4Q33E94 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.72□□□□□ -2.13
RFX4Q33E94 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.72□□□□□ -2.13
RFX4Q33E94 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.72□□□□□ -2.13
RFX4Q33E94 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.72□□□□□ -2.13
RFX4Q33E94 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.72□□□□□ -2.13
RFX4Q33E94 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.72□□□□□ -2.13
RFX4Q33E94 RPL23AP42-201ENST00000471152 471 ntBASIC1.72□□□□□ -2.13
RFX4Q33E94 AC117503.1-201ENST00000472241 394 ntBASIC1.72□□□□□ -2.13
RFX4Q33E94 HMGB3P17-201ENST00000504195 649 ntBASIC1.72□□□□□ -2.13
RFX4Q33E94 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.72□□□□□ -2.13
RFX4Q33E94 PSMA3P-201ENST00000555485 635 ntBASIC1.72□□□□□ -2.13
RFX4Q33E94 MIR5739-201ENST00000619803 80 ntBASIC1.72□□□□□ -2.13
RFX4Q33E94 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.72□□□□□ -2.13
RFX4Q33E94 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
RFX4Q33E94 ZNF355P-201ENST00000427301 3216 ntBASIC1.71□□□□□ -2.14
RFX4Q33E94 ZNF702P-202ENST00000434269 1966 ntBASIC1.71□□□□□ -2.14
RFX4Q33E94 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
RFX4Q33E94 RNU6-1120P-201ENST00000362988 108 ntBASIC1.71□□□□□ -2.14
RFX4Q33E94 Y_RNA.324-201ENST00000365165 102 ntBASIC1.71□□□□□ -2.14
RFX4Q33E94 RNU6-234P-201ENST00000365229 104 ntBASIC1.71□□□□□ -2.14
RFX4Q33E94 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
RFX4Q33E94 RNU6-1103P-201ENST00000384150 107 ntBASIC1.71□□□□□ -2.14
RFX4Q33E94 RNU6-1119P-201ENST00000384349 108 ntBASIC1.71□□□□□ -2.14
RFX4Q33E94 SNORD70.1-201ENST00000391007 85 ntBASIC1.71□□□□□ -2.14
RFX4Q33E94 RNU6-903P-201ENST00000391270 109 ntBASIC1.71□□□□□ -2.14
RFX4Q33E94 OR9R1P-201ENST00000412200 877 ntBASIC1.71□□□□□ -2.14
RFX4Q33E94 RPL31P63-201ENST00000422565 375 ntBASIC1.71□□□□□ -2.14
RFX4Q33E94 MTCYBP8-201ENST00000422855 651 ntBASIC1.71□□□□□ -2.14
RFX4Q33E94 AL161788.1-201ENST00000441805 169 ntBASIC1.71□□□□□ -2.14
RFX4Q33E94 AC007969.2-201ENST00000441891 191 ntBASIC1.71□□□□□ -2.14
RFX4Q33E94 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.71□□□□□ -2.14
RFX4Q33E94 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms