Protein–RNA interactions for Protein: Q16143

SNCB, Beta-synuclein, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCBQ16143 RNU6-197P-201ENST00000516680 100 ntBASIC0.67□□□□□ -2.3
SNCBQ16143 RNA5SP437-201ENST00000517249 129 ntBASIC0.67□□□□□ -2.3
SNCBQ16143 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.67□□□□□ -2.3
SNCBQ16143 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC0.67□□□□□ -2.3
SNCBQ16143 RPL21P136-201ENST00000605378 396 ntBASIC0.67□□□□□ -2.3
SNCBQ16143 AC120349.3-201ENST00000624377 529 ntBASIC0.67□□□□□ -2.3
SNCBQ16143 snoU2_19.1-201ENST00000362361 80 ntBASIC0.66□□□□□ -2.3
SNCBQ16143 RNU6-289P-201ENST00000364093 107 ntBASIC0.66□□□□□ -2.3
SNCBQ16143 SNORA4.3-201ENST00000365564 137 ntBASIC0.66□□□□□ -2.3
SNCBQ16143 SNORA75B-201ENST00000384053 137 ntBASIC0.66□□□□□ -2.3
SNCBQ16143 MIR19B1-201ENST00000384829 87 ntBASIC0.66□□□□□ -2.3
SNCBQ16143 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.66□□□□□ -2.3
SNCBQ16143 AP000542.1-201ENST00000448473 371 ntBASIC0.66□□□□□ -2.3
SNCBQ16143 ARL2BPP4-201ENST00000506854 471 ntBASIC0.66□□□□□ -2.3
SNCBQ16143 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.66□□□□□ -2.3
SNCBQ16143 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
SNCBQ16143 RNA5SP481-201ENST00000516814 122 ntBASIC0.66□□□□□ -2.3
SNCBQ16143 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.66□□□□□ -2.3
SNCBQ16143 AC091163.3-201ENST00000518269 1144 ntBASIC0.66□□□□□ -2.3
SNCBQ16143 HMGB1P33-201ENST00000563485 527 ntBASIC0.66□□□□□ -2.3
SNCBQ16143 AC098483.2-201ENST00000603158 454 ntBASIC0.66□□□□□ -2.3
SNCBQ16143 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.66□□□□□ -2.3
SNCBQ16143 Y_RNA.33-201ENST00000362591 102 ntBASIC0.65□□□□□ -2.31
SNCBQ16143 RNU6-72P-201ENST00000384285 79 ntBASIC0.65□□□□□ -2.31
SNCBQ16143 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.65□□□□□ -2.31
SNCBQ16143 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.65□□□□□ -2.31
SNCBQ16143 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.65□□□□□ -2.31
SNCBQ16143 AL365338.1-201ENST00000422282 858 ntBASIC0.65□□□□□ -2.31
SNCBQ16143 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.65□□□□□ -2.31
SNCBQ16143 TIMM9P1-201ENST00000436122 256 ntBASIC0.65□□□□□ -2.31
SNCBQ16143 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.65□□□□□ -2.31
SNCBQ16143 ZNF886P-201ENST00000450781 723 ntBASIC0.65□□□□□ -2.31
SNCBQ16143 TRBVA-201ENST00000498804 316 ntBASIC0.65□□□□□ -2.31
SNCBQ16143 AF131216.2-201ENST00000512316 564 ntBASIC0.65□□□□□ -2.31
SNCBQ16143 SNORD60.2-201ENST00000516883 86 ntBASIC0.65□□□□□ -2.31
SNCBQ16143 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.65□□□□□ -2.31
SNCBQ16143 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC0.65□□□□□ -2.31
SNCBQ16143 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.65□□□□□ -2.31
SNCBQ16143 AC109446.2-201ENST00000567872 497 ntBASIC0.65□□□□□ -2.31
SNCBQ16143 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.65□□□□□ -2.31
SNCBQ16143 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.65□□□□□ -2.31
SNCBQ16143 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.65□□□□□ -2.31
SNCBQ16143 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC0.65□□□□□ -2.31
SNCBQ16143 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC0.65□□□□□ -2.31
SNCBQ16143 BNIP3P31-201ENST00000604515 566 ntBASIC0.65□□□□□ -2.31
SNCBQ16143 AC007792.1-201ENST00000623023 402 ntBASIC0.65□□□□□ -2.31
SNCBQ16143 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.65□□□□□ -2.31
SNCBQ16143 MIR340-201ENST00000362125 95 ntBASIC0.64□□□□□ -2.31
SNCBQ16143 RNU6-212P-201ENST00000362642 104 ntBASIC0.64□□□□□ -2.31
SNCBQ16143 SNORA63D-201ENST00000364359 132 ntBASIC0.64□□□□□ -2.31
SNCBQ16143 RNU6-395P-201ENST00000365662 106 ntBASIC0.64□□□□□ -2.31
SNCBQ16143 RNU6-733P-201ENST00000410759 104 ntBASIC0.64□□□□□ -2.31
SNCBQ16143 AL359704.1-201ENST00000411586 781 ntBASIC0.64□□□□□ -2.31
SNCBQ16143 CYCSP33-201ENST00000414485 327 ntBASIC0.64□□□□□ -2.31
SNCBQ16143 RNU6-914P-201ENST00000516749 109 ntBASIC0.64□□□□□ -2.31
SNCBQ16143 RNA5SP503-201ENST00000517047 117 ntBASIC0.64□□□□□ -2.31
SNCBQ16143 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC0.64□□□□□ -2.31
SNCBQ16143 DEFB108A-201ENST00000530110 222 ntBASIC0.64□□□□□ -2.31
SNCBQ16143 AP000907.2-201ENST00000530827 353 ntBASIC0.64□□□□□ -2.31
SNCBQ16143 MIR3664-201ENST00000579074 99 ntBASIC0.64□□□□□ -2.31
SNCBQ16143 AL365204.3-201ENST00000612448 685 ntBASIC0.64□□□□□ -2.31
SNCBQ16143 AC245060.5-201ENST00000610778 3293 ntBASIC0.63□□□□□ -2.31
SNCBQ16143 AC068700.1-201ENST00000565862 3754 ntBASIC0.63□□□□□ -2.31
SNCBQ16143 RNU6-777P-201ENST00000364265 104 ntBASIC0.63□□□□□ -2.31
SNCBQ16143 MIR92A1-201ENST00000385233 78 ntBASIC0.63□□□□□ -2.31
SNCBQ16143 AL117342.1-201ENST00000404861 406 ntBASIC0.63□□□□□ -2.31
SNCBQ16143 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.63□□□□□ -2.31
SNCBQ16143 AC013262.1-201ENST00000426710 252 ntBASIC0.63□□□□□ -2.31
SNCBQ16143 LARP1BP3-201ENST00000437229 869 ntBASIC0.63□□□□□ -2.31
SNCBQ16143 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.63□□□□□ -2.31
SNCBQ16143 RAP1BP2-201ENST00000478270 544 ntBASIC0.63□□□□□ -2.31
SNCBQ16143 MTND1P3-201ENST00000484956 952 ntBASIC0.63□□□□□ -2.31
SNCBQ16143 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.63□□□□□ -2.31
SNCBQ16143 RNA5SP490-201ENST00000517141 136 ntBASIC0.63□□□□□ -2.31
SNCBQ16143 AC087897.1-201ENST00000550134 156 ntBASIC0.63□□□□□ -2.31
SNCBQ16143 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.63□□□□□ -2.31
SNCBQ16143 AL512347.1-201ENST00000566420 503 ntBASIC0.63□□□□□ -2.31
SNCBQ16143 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC0.63□□□□□ -2.31
SNCBQ16143 AC008751.2-201ENST00000597885 980 ntBASIC0.63□□□□□ -2.31
SNCBQ16143 AL391001.1-201ENST00000602747 715 ntBASIC0.63□□□□□ -2.31
SNCBQ16143 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.63□□□□□ -2.31
SNCBQ16143 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC0.63□□□□□ -2.31
SNCBQ16143 AC063943.3-201ENST00000615562 356 ntBASIC0.63□□□□□ -2.31
SNCBQ16143 AC010615.1-201ENST00000594254 1764 ntBASIC0.62□□□□□ -2.31
SNCBQ16143 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
SNCBQ16143 snoZ40.1-201ENST00000364540 72 ntBASIC0.62□□□□□ -2.31
SNCBQ16143 FCF1P10-201ENST00000407590 479 ntBASIC0.62□□□□□ -2.31
SNCBQ16143 HMGN1P14-201ENST00000412459 517 ntBASIC0.62□□□□□ -2.31
SNCBQ16143 AC123900.1-201ENST00000420390 96 ntBASIC0.62□□□□□ -2.31
SNCBQ16143 MTCYBP5-201ENST00000423752 1135 ntBASIC0.62□□□□□ -2.31
SNCBQ16143 AC010099.3-201ENST00000423896 409 ntBASIC0.62□□□□□ -2.31
SNCBQ16143 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.62□□□□□ -2.31
SNCBQ16143 FTH1P25-201ENST00000447665 469 ntBASIC0.62□□□□□ -2.31
SNCBQ16143 PAXBP1P1-201ENST00000449315 447 ntBASIC0.62□□□□□ -2.31
SNCBQ16143 NDUFB1P2-201ENST00000449477 176 ntBASIC0.62□□□□□ -2.31
SNCBQ16143 AL583843.1-201ENST00000456070 346 ntBASIC0.62□□□□□ -2.31
SNCBQ16143 AC117454.1-201ENST00000491120 168 ntBASIC0.62□□□□□ -2.31
SNCBQ16143 RNA5SP102-201ENST00000516865 106 ntBASIC0.62□□□□□ -2.31
SNCBQ16143 AL132657.2-201ENST00000564417 358 ntBASIC0.62□□□□□ -2.31
SNCBQ16143 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 213.7 ms