Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 RNU6-108P-201ENST00000365558 107 ntBASIC1.8□□□□□ -2.12
SMARCB1Q12824 AL356432.1-201ENST00000405809 419 ntBASIC1.8□□□□□ -2.12
SMARCB1Q12824 RN7SKP158-201ENST00000410453 326 ntBASIC1.8□□□□□ -2.12
SMARCB1Q12824 CYCSP33-201ENST00000414485 327 ntBASIC1.8□□□□□ -2.12
SMARCB1Q12824 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.8□□□□□ -2.12
SMARCB1Q12824 AC090960.1-201ENST00000421072 306 ntBASIC1.8□□□□□ -2.12
SMARCB1Q12824 PGBD4P6-201ENST00000421501 610 ntBASIC1.8□□□□□ -2.12
SMARCB1Q12824 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.8□□□□□ -2.12
SMARCB1Q12824 MTND4P32-201ENST00000437189 1237 ntBASIC1.8□□□□□ -2.12
SMARCB1Q12824 AL451074.3-201ENST00000437709 472 ntBASIC1.8□□□□□ -2.12
SMARCB1Q12824 AL603825.1-201ENST00000438481 80 ntBASIC1.8□□□□□ -2.12
SMARCB1Q12824 KATNBL1P3-201ENST00000443475 909 ntBASIC1.8□□□□□ -2.12
SMARCB1Q12824 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.8□□□□□ -2.12
SMARCB1Q12824 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.8□□□□□ -2.12
SMARCB1Q12824 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.8□□□□□ -2.12
SMARCB1Q12824 MED28P2-201ENST00000475771 317 ntBASIC1.8□□□□□ -2.12
SMARCB1Q12824 RPL36AP48-201ENST00000485521 314 ntBASIC1.8□□□□□ -2.12
SMARCB1Q12824 AP001025.1-201ENST00000486139 332 ntBASIC1.8□□□□□ -2.12
SMARCB1Q12824 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.8□□□□□ -2.12
SMARCB1Q12824 AC104806.1-201ENST00000508720 308 ntBASIC1.8□□□□□ -2.12
SMARCB1Q12824 AC010486.3-201ENST00000511602 785 ntBASIC1.8□□□□□ -2.12
SMARCB1Q12824 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.8□□□□□ -2.12
SMARCB1Q12824 RNU6-445P-201ENST00000516949 107 ntBASIC1.8□□□□□ -2.12
SMARCB1Q12824 MIR4529-201ENST00000578110 78 ntBASIC1.8□□□□□ -2.12
SMARCB1Q12824 MIR4775-201ENST00000581168 75 ntBASIC1.8□□□□□ -2.12
SMARCB1Q12824 AP000942.3-201ENST00000603702 160 ntBASIC1.8□□□□□ -2.12
SMARCB1Q12824 Z84480.1-201ENST00000605131 311 ntBASIC1.8□□□□□ -2.12
SMARCB1Q12824 AC006566.1-201ENST00000608943 513 ntBASIC1.8□□□□□ -2.12
SMARCB1Q12824 AC008147.4-201ENST00000617570 1204 ntBASIC1.8□□□□□ -2.12
SMARCB1Q12824 AC092656.1-203ENST00000624134 423 ntBASIC1.8□□□□□ -2.12
SMARCB1Q12824 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.8□□□□□ -2.12
SMARCB1Q12824 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.8□□□□□ -2.12
SMARCB1Q12824 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SMARCB1Q12824 RNU6-486P-201ENST00000363116 107 ntBASIC1.79□□□□□ -2.12
SMARCB1Q12824 RNU6-1303P-201ENST00000364841 107 ntBASIC1.79□□□□□ -2.12
SMARCB1Q12824 RNU6-116P-201ENST00000384042 109 ntBASIC1.79□□□□□ -2.12
SMARCB1Q12824 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.79□□□□□ -2.12
SMARCB1Q12824 OR6C66P-201ENST00000414917 930 ntBASIC1.79□□□□□ -2.12
SMARCB1Q12824 AL353621.1-201ENST00000418219 243 ntBASIC1.79□□□□□ -2.12
SMARCB1Q12824 AL669831.1-202ENST00000428504 417 ntBASIC1.79□□□□□ -2.12
SMARCB1Q12824 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.79□□□□□ -2.12
SMARCB1Q12824 AC133104.1-201ENST00000429100 218 ntBASIC1.79□□□□□ -2.12
SMARCB1Q12824 GTF2IP13-201ENST00000438487 386 ntBASIC1.79□□□□□ -2.12
SMARCB1Q12824 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.79□□□□□ -2.12
SMARCB1Q12824 MTCO1P19-201ENST00000443487 500 ntBASIC1.79□□□□□ -2.12
SMARCB1Q12824 RPS29P15-201ENST00000458329 171 ntBASIC1.79□□□□□ -2.12
SMARCB1Q12824 RNA5SP112-201ENST00000515937 99 ntBASIC1.79□□□□□ -2.12
SMARCB1Q12824 RNU6-430P-201ENST00000517078 107 ntBASIC1.79□□□□□ -2.12
SMARCB1Q12824 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.79□□□□□ -2.12
SMARCB1Q12824 HSBP1P1-201ENST00000555205 166 ntBASIC1.79□□□□□ -2.12
SMARCB1Q12824 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.79□□□□□ -2.12
SMARCB1Q12824 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.79□□□□□ -2.12
SMARCB1Q12824 AC119751.7-201ENST00000600494 245 ntBASIC1.79□□□□□ -2.12
SMARCB1Q12824 AL713866.2-201ENST00000603579 219 ntBASIC1.79□□□□□ -2.12
SMARCB1Q12824 AC245014.2-201ENST00000603689 287 ntBASIC1.79□□□□□ -2.12
SMARCB1Q12824 AC246785.4-201ENST00000605374 287 ntBASIC1.79□□□□□ -2.12
SMARCB1Q12824 AC009509.4-201ENST00000619202 509 ntBASIC1.79□□□□□ -2.12
SMARCB1Q12824 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.79□□□□□ -2.12
SMARCB1Q12824 MTND5P17-201ENST00000418405 1603 ntBASIC1.79□□□□□ -2.12
SMARCB1Q12824 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.79□□□□□ -2.12
SMARCB1Q12824 Y_RNA.159-201ENST00000363674 87 ntBASIC1.78□□□□□ -2.12
SMARCB1Q12824 RNU6-1029P-201ENST00000384109 107 ntBASIC1.78□□□□□ -2.12
SMARCB1Q12824 MIR454-201ENST00000390180 115 ntBASIC1.78□□□□□ -2.12
SMARCB1Q12824 RNA5SP213-201ENST00000391031 106 ntBASIC1.78□□□□□ -2.12
SMARCB1Q12824 AC097463.2-201ENST00000421074 142 ntBASIC1.78□□□□□ -2.12
SMARCB1Q12824 AC008267.5-201ENST00000424928 265 ntBASIC1.78□□□□□ -2.12
SMARCB1Q12824 MTCO2P11-201ENST00000431069 680 ntBASIC1.78□□□□□ -2.12
SMARCB1Q12824 AC079781.2-201ENST00000446424 169 ntBASIC1.78□□□□□ -2.12
SMARCB1Q12824 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.78□□□□□ -2.12
SMARCB1Q12824 C1DP4-201ENST00000455429 424 ntBASIC1.78□□□□□ -2.12
SMARCB1Q12824 AC018437.1-201ENST00000492214 406 ntBASIC1.78□□□□□ -2.12
SMARCB1Q12824 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.78□□□□□ -2.12
SMARCB1Q12824 AF213884.2-201ENST00000510417 903 ntBASIC1.78□□□□□ -2.12
SMARCB1Q12824 RNU5B-3P-201ENST00000516601 115 ntBASIC1.78□□□□□ -2.12
SMARCB1Q12824 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.78□□□□□ -2.12
SMARCB1Q12824 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.78□□□□□ -2.12
SMARCB1Q12824 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.78□□□□□ -2.12
SMARCB1Q12824 AC136619.2-201ENST00000563361 631 ntBASIC1.78□□□□□ -2.12
SMARCB1Q12824 AC104581.2-201ENST00000572227 430 ntBASIC1.78□□□□□ -2.12
SMARCB1Q12824 AC010928.2-201ENST00000588017 287 ntBASIC1.78□□□□□ -2.12
SMARCB1Q12824 BNIP3P30-201ENST00000601184 574 ntBASIC1.78□□□□□ -2.12
SMARCB1Q12824 BNIP3P10-201ENST00000605360 577 ntBASIC1.78□□□□□ -2.12
SMARCB1Q12824 AC087752.4-201ENST00000605911 462 ntBASIC1.78□□□□□ -2.12
SMARCB1Q12824 MIR8081-201ENST00000611533 95 ntBASIC1.78□□□□□ -2.12
SMARCB1Q12824 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.78□□□□□ -2.12
SMARCB1Q12824 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.78□□□□□ -2.12
SMARCB1Q12824 RNU6-858P-201ENST00000362436 107 ntBASIC1.77□□□□□ -2.13
SMARCB1Q12824 Y_RNA.40-201ENST00000362645 93 ntBASIC1.77□□□□□ -2.13
SMARCB1Q12824 RNU6-622P-201ENST00000384272 103 ntBASIC1.77□□□□□ -2.13
SMARCB1Q12824 MIR1302-8-201ENST00000408342 128 ntBASIC1.77□□□□□ -2.13
SMARCB1Q12824 PIGFP2-201ENST00000421400 651 ntBASIC1.77□□□□□ -2.13
SMARCB1Q12824 MTCO2P16-201ENST00000436962 677 ntBASIC1.77□□□□□ -2.13
SMARCB1Q12824 AL353689.1-201ENST00000438895 199 ntBASIC1.77□□□□□ -2.13
SMARCB1Q12824 AC098826.2-201ENST00000452011 651 ntBASIC1.77□□□□□ -2.13
SMARCB1Q12824 SNORD13-201ENST00000459299 104 ntBASIC1.77□□□□□ -2.13
SMARCB1Q12824 Y_RNA.638-201ENST00000459374 113 ntBASIC1.77□□□□□ -2.13
SMARCB1Q12824 ARL2BPP4-201ENST00000506854 471 ntBASIC1.77□□□□□ -2.13
SMARCB1Q12824 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
SMARCB1Q12824 AP004607.1-201ENST00000524456 203 ntBASIC1.77□□□□□ -2.13
SMARCB1Q12824 AP005435.4-201ENST00000529514 284 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms