Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.83□□□□□ -1.96
LTBQ06643 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
LTBQ06643 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.83□□□□□ -1.96
LTBQ06643 MIR412-201ENST00000362142 91 ntBASIC2.83□□□□□ -1.96
LTBQ06643 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.83□□□□□ -1.96
LTBQ06643 RNU6-790P-201ENST00000384479 105 ntBASIC2.83□□□□□ -1.96
LTBQ06643 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.83□□□□□ -1.96
LTBQ06643 RNU2-33P-201ENST00000410344 192 ntBASIC2.83□□□□□ -1.96
LTBQ06643 RNU6-174P-201ENST00000410406 106 ntBASIC2.83□□□□□ -1.96
LTBQ06643 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.83□□□□□ -1.96
LTBQ06643 AL096701.2-201ENST00000416920 238 ntBASIC2.83□□□□□ -1.96
LTBQ06643 AC093151.1-201ENST00000427711 313 ntBASIC2.83□□□□□ -1.96
LTBQ06643 AL356867.1-201ENST00000429623 299 ntBASIC2.83□□□□□ -1.96
LTBQ06643 MTCYBP9-201ENST00000431021 303 ntBASIC2.83□□□□□ -1.96
LTBQ06643 AC011816.1-201ENST00000441346 546 ntBASIC2.83□□□□□ -1.96
LTBQ06643 UQCRHP3-201ENST00000451503 251 ntBASIC2.83□□□□□ -1.96
LTBQ06643 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.83□□□□□ -1.96
LTBQ06643 RN7SL75P-201ENST00000461926 281 ntBASIC2.83□□□□□ -1.96
LTBQ06643 AC128713.1-201ENST00000471495 306 ntBASIC2.83□□□□□ -1.96
LTBQ06643 AC092185.1-201ENST00000491371 97 ntBASIC2.83□□□□□ -1.96
LTBQ06643 AC022447.4-201ENST00000504053 364 ntBASIC2.83□□□□□ -1.96
LTBQ06643 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.83□□□□□ -1.96
LTBQ06643 MTCO2P24-201ENST00000515611 426 ntBASIC2.83□□□□□ -1.96
LTBQ06643 RNU4-77P-201ENST00000516692 156 ntBASIC2.83□□□□□ -1.96
LTBQ06643 RNU6-264P-201ENST00000517134 104 ntBASIC2.83□□□□□ -1.96
LTBQ06643 AP002404.1-201ENST00000532005 451 ntBASIC2.83□□□□□ -1.96
LTBQ06643 CPDP1-201ENST00000579660 283 ntBASIC2.83□□□□□ -1.96
LTBQ06643 MIR3162-201ENST00000581818 82 ntBASIC2.83□□□□□ -1.96
LTBQ06643 AC005899.2-201ENST00000584353 90 ntBASIC2.83□□□□□ -1.96
LTBQ06643 MIR3976-201ENST00000606807 139 ntBASIC2.83□□□□□ -1.96
LTBQ06643 SNORD58B-201ENST00000607313 66 ntBASIC2.83□□□□□ -1.96
LTBQ06643 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.83□□□□□ -1.96
LTBQ06643 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.83□□□□□ -1.96
LTBQ06643 AC018692.3-201ENST00000623929 123 ntBASIC2.83□□□□□ -1.96
LTBQ06643 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.83□□□□□ -1.96
LTBQ06643 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
LTBQ06643 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
LTBQ06643 AC093831.2-201ENST00000624393 3427 ntBASIC2.83□□□□□ -1.96
LTBQ06643 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
LTBQ06643 OR56A5-201ENST00000340110 738 ntBASIC2.82□□□□□ -1.96
LTBQ06643 Y_RNA.153-201ENST00000363615 91 ntBASIC2.82□□□□□ -1.96
LTBQ06643 RNU1-115P-201ENST00000365329 160 ntBASIC2.82□□□□□ -1.96
LTBQ06643 RNU6-596P-201ENST00000365395 98 ntBASIC2.82□□□□□ -1.96
LTBQ06643 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
LTBQ06643 SNORA46-201ENST00000384762 135 ntBASIC2.82□□□□□ -1.96
LTBQ06643 Y_RNA.623-201ENST00000411128 95 ntBASIC2.82□□□□□ -1.96
LTBQ06643 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.82□□□□□ -1.96
LTBQ06643 SNORD56-201ENST00000413522 71 ntBASIC2.82□□□□□ -1.96
LTBQ06643 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.82□□□□□ -1.96
LTBQ06643 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.82□□□□□ -1.96
LTBQ06643 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.82□□□□□ -1.96
LTBQ06643 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.82□□□□□ -1.96
LTBQ06643 AC009969.1-201ENST00000438726 172 ntBASIC2.82□□□□□ -1.96
LTBQ06643 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.82□□□□□ -1.96
LTBQ06643 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.82□□□□□ -1.96
LTBQ06643 FO393415.2-201ENST00000480085 343 ntBASIC2.82□□□□□ -1.96
LTBQ06643 AC105758.1-201ENST00000506038 399 ntBASIC2.82□□□□□ -1.96
LTBQ06643 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.82□□□□□ -1.96
LTBQ06643 SUB1P3-201ENST00000564581 315 ntBASIC2.82□□□□□ -1.96
LTBQ06643 AC113195.1-201ENST00000579952 141 ntBASIC2.82□□□□□ -1.96
LTBQ06643 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.82□□□□□ -1.96
LTBQ06643 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.82□□□□□ -1.96
LTBQ06643 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.82□□□□□ -1.96
LTBQ06643 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
LTBQ06643 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.82□□□□□ -1.96
LTBQ06643 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.82□□□□□ -1.96
LTBQ06643 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.82□□□□□ -1.96
LTBQ06643 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
LTBQ06643 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
LTBQ06643 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
LTBQ06643 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
LTBQ06643 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
LTBQ06643 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
LTBQ06643 Y_RNA.47-201ENST00000362697 108 ntBASIC2.81□□□□□ -1.96
LTBQ06643 Y_RNA.455-201ENST00000384230 98 ntBASIC2.81□□□□□ -1.96
LTBQ06643 SNORA54-201ENST00000384281 123 ntBASIC2.81□□□□□ -1.96
LTBQ06643 RNU2-23P-201ENST00000410545 195 ntBASIC2.81□□□□□ -1.96
LTBQ06643 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.81□□□□□ -1.96
LTBQ06643 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.81□□□□□ -1.96
LTBQ06643 AC096644.2-201ENST00000429278 159 ntBASIC2.81□□□□□ -1.96
LTBQ06643 AL353997.1-201ENST00000432936 108 ntBASIC2.81□□□□□ -1.96
LTBQ06643 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.81□□□□□ -1.96
LTBQ06643 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.81□□□□□ -1.96
LTBQ06643 NDUFB1P2-201ENST00000449477 176 ntBASIC2.81□□□□□ -1.96
LTBQ06643 AL031274.1-201ENST00000450334 232 ntBASIC2.81□□□□□ -1.96
LTBQ06643 CHEK2P4-201ENST00000450340 246 ntBASIC2.81□□□□□ -1.96
LTBQ06643 AL353752.1-201ENST00000454946 260 ntBASIC2.81□□□□□ -1.96
LTBQ06643 U8.20-201ENST00000459445 131 ntBASIC2.81□□□□□ -1.96
LTBQ06643 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.81□□□□□ -1.96
LTBQ06643 HMGN2P13-201ENST00000476476 274 ntBASIC2.81□□□□□ -1.96
LTBQ06643 AC015911.1-201ENST00000495111 156 ntBASIC2.81□□□□□ -1.96
LTBQ06643 AC116655.1-201ENST00000508324 901 ntBASIC2.81□□□□□ -1.96
LTBQ06643 RNU6-307P-201ENST00000516743 106 ntBASIC2.81□□□□□ -1.96
LTBQ06643 SNORA31.19-201ENST00000517079 126 ntBASIC2.81□□□□□ -1.96
LTBQ06643 RNA5SP165-201ENST00000517142 115 ntBASIC2.81□□□□□ -1.96
LTBQ06643 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
LTBQ06643 ATP5F1P5-201ENST00000526403 760 ntBASIC2.81□□□□□ -1.96
LTBQ06643 AC023442.1-201ENST00000531247 422 ntBASIC2.81□□□□□ -1.96
LTBQ06643 CBX3P8-201ENST00000532412 525 ntBASIC2.81□□□□□ -1.96
LTBQ06643 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms