Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 SNRPEP7-201ENST00000438350 220 ntBASIC0.37□□□□□ -2.35
HIST1H1AQ02539 RNU7-136P-201ENST00000458819 69 ntBASIC0.37□□□□□ -2.35
HIST1H1AQ02539 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.37□□□□□ -2.35
HIST1H1AQ02539 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.37□□□□□ -2.35
HIST1H1AQ02539 AC025423.5-201ENST00000550230 219 ntBASIC0.37□□□□□ -2.35
HIST1H1AQ02539 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.37□□□□□ -2.35
HIST1H1AQ02539 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.37□□□□□ -2.35
HIST1H1AQ02539 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC0.37□□□□□ -2.35
HIST1H1AQ02539 MTATP6P3-201ENST00000581686 676 ntBASIC0.37□□□□□ -2.35
HIST1H1AQ02539 MIR6504-201ENST00000613520 61 ntBASIC0.37□□□□□ -2.35
HIST1H1AQ02539 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.37□□□□□ -2.35
HIST1H1AQ02539 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.37□□□□□ -2.35
HIST1H1AQ02539 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.37□□□□□ -2.35
HIST1H1AQ02539 AL391994.1-201ENST00000254724 282 ntBASIC0.36□□□□□ -2.35
HIST1H1AQ02539 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.36□□□□□ -2.35
HIST1H1AQ02539 RNU6-952P-201ENST00000391164 108 ntBASIC0.36□□□□□ -2.35
HIST1H1AQ02539 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.36□□□□□ -2.35
HIST1H1AQ02539 TXNL1P1-201ENST00000429528 554 ntBASIC0.36□□□□□ -2.35
HIST1H1AQ02539 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.36□□□□□ -2.35
HIST1H1AQ02539 AC003071.1-201ENST00000451219 789 ntBASIC0.36□□□□□ -2.35
HIST1H1AQ02539 HMGB1P30-201ENST00000492455 606 ntBASIC0.36□□□□□ -2.35
HIST1H1AQ02539 RNU6-229P-201ENST00000516614 102 ntBASIC0.36□□□□□ -2.35
HIST1H1AQ02539 RNA5SP490-201ENST00000517141 136 ntBASIC0.36□□□□□ -2.35
HIST1H1AQ02539 AC006518.2-201ENST00000542513 940 ntBASIC0.36□□□□□ -2.35
HIST1H1AQ02539 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.36□□□□□ -2.35
HIST1H1AQ02539 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.36□□□□□ -2.35
HIST1H1AQ02539 AL391001.1-201ENST00000602747 715 ntBASIC0.36□□□□□ -2.35
HIST1H1AQ02539 AC078795.2-201ENST00000602835 1252 ntBASIC0.36□□□□□ -2.35
HIST1H1AQ02539 AL356094.1-201ENST00000624663 1212 ntBASIC0.36□□□□□ -2.35
HIST1H1AQ02539 snoU2_19.1-201ENST00000362361 80 ntBASIC0.35□□□□□ -2.35
HIST1H1AQ02539 RNA5SP347-201ENST00000362445 119 ntBASIC0.35□□□□□ -2.35
HIST1H1AQ02539 RNU4-79P-201ENST00000362764 141 ntBASIC0.35□□□□□ -2.35
HIST1H1AQ02539 Y_RNA.164-201ENST00000363709 102 ntBASIC0.35□□□□□ -2.35
HIST1H1AQ02539 SNORD18A-201ENST00000363753 72 ntBASIC0.35□□□□□ -2.35
HIST1H1AQ02539 SNORA25.9-201ENST00000365087 128 ntBASIC0.35□□□□□ -2.35
HIST1H1AQ02539 RNU6-481P-201ENST00000384194 107 ntBASIC0.35□□□□□ -2.35
HIST1H1AQ02539 RNU6-1176P-201ENST00000390955 107 ntBASIC0.35□□□□□ -2.35
HIST1H1AQ02539 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC0.35□□□□□ -2.35
HIST1H1AQ02539 AL158050.1-201ENST00000416077 457 ntBASIC0.35□□□□□ -2.35
HIST1H1AQ02539 AC114737.2-201ENST00000421583 173 ntBASIC0.35□□□□□ -2.35
HIST1H1AQ02539 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.35□□□□□ -2.35
HIST1H1AQ02539 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC0.35□□□□□ -2.35
HIST1H1AQ02539 AL606517.1-201ENST00000446914 387 ntBASIC0.35□□□□□ -2.35
HIST1H1AQ02539 ELOCP30-201ENST00000447108 299 ntBASIC0.35□□□□□ -2.35
HIST1H1AQ02539 snoU13.27-201ENST00000459278 104 ntBASIC0.35□□□□□ -2.35
HIST1H1AQ02539 AC104563.1-201ENST00000476147 376 ntBASIC0.35□□□□□ -2.35
HIST1H1AQ02539 RPF2P2-201ENST00000504693 896 ntBASIC0.35□□□□□ -2.35
HIST1H1AQ02539 RNU6-165P-201ENST00000517170 99 ntBASIC0.35□□□□□ -2.35
HIST1H1AQ02539 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.35□□□□□ -2.35
HIST1H1AQ02539 HIGD1AP17-201ENST00000554576 276 ntBASIC0.35□□□□□ -2.35
HIST1H1AQ02539 MIR4452-201ENST00000583004 71 ntBASIC0.35□□□□□ -2.35
HIST1H1AQ02539 BNIP3P9-201ENST00000603714 553 ntBASIC0.35□□□□□ -2.35
HIST1H1AQ02539 AC100814.1-201ENST00000606963 623 ntBASIC0.35□□□□□ -2.35
HIST1H1AQ02539 RNU6-87P-201ENST00000607561 108 ntBASIC0.35□□□□□ -2.35
HIST1H1AQ02539 MIR8070-201ENST00000616510 88 ntBASIC0.35□□□□□ -2.35
HIST1H1AQ02539 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.35□□□□□ -2.35
HIST1H1AQ02539 AL157770.1-201ENST00000623049 439 ntBASIC0.35□□□□□ -2.35
HIST1H1AQ02539 RNU6-212P-201ENST00000362642 104 ntBASIC0.34□□□□□ -2.36
HIST1H1AQ02539 RNU6-1019P-201ENST00000364424 107 ntBASIC0.34□□□□□ -2.36
HIST1H1AQ02539 RNU6-166P-201ENST00000384371 107 ntBASIC0.34□□□□□ -2.36
HIST1H1AQ02539 MIR10B-201ENST00000385011 110 ntBASIC0.34□□□□□ -2.36
HIST1H1AQ02539 MIR548J-201ENST00000408833 112 ntBASIC0.34□□□□□ -2.36
HIST1H1AQ02539 AL590556.1-201ENST00000423231 483 ntBASIC0.34□□□□□ -2.36
HIST1H1AQ02539 CETN4P-201ENST00000432407 469 ntBASIC0.34□□□□□ -2.36
HIST1H1AQ02539 AL008629.1-201ENST00000438615 184 ntBASIC0.34□□□□□ -2.36
HIST1H1AQ02539 AC069257.2-201ENST00000441819 155 ntBASIC0.34□□□□□ -2.36
HIST1H1AQ02539 NEFMP1-201ENST00000443423 1006 ntBASIC0.34□□□□□ -2.36
HIST1H1AQ02539 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.34□□□□□ -2.36
HIST1H1AQ02539 GXYLT1P1-201ENST00000446657 490 ntBASIC0.34□□□□□ -2.36
HIST1H1AQ02539 FTH1P25-201ENST00000447665 469 ntBASIC0.34□□□□□ -2.36
HIST1H1AQ02539 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC0.34□□□□□ -2.36
HIST1H1AQ02539 RPL39P36-201ENST00000490784 156 ntBASIC0.34□□□□□ -2.36
HIST1H1AQ02539 CR383656.8-201ENST00000549046 145 ntBASIC0.34□□□□□ -2.36
HIST1H1AQ02539 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.34□□□□□ -2.36
HIST1H1AQ02539 SNRPGP1-201ENST00000553864 222 ntBASIC0.34□□□□□ -2.36
HIST1H1AQ02539 AL121579.1-201ENST00000555129 305 ntBASIC0.34□□□□□ -2.36
HIST1H1AQ02539 AL133153.1-201ENST00000557756 303 ntBASIC0.34□□□□□ -2.36
HIST1H1AQ02539 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.34□□□□□ -2.36
HIST1H1AQ02539 AC091489.2-201ENST00000566263 604 ntBASIC0.34□□□□□ -2.36
HIST1H1AQ02539 AC106858.1-201ENST00000637497 429 ntBASIC0.34□□□□□ -2.36
HIST1H1AQ02539 CDR1-202ENST00000625883 1485 ntBASIC0.34□□□□□ -2.36
HIST1H1AQ02539 Y_RNA.4-201ENST00000362333 112 ntBASIC0.33□□□□□ -2.36
HIST1H1AQ02539 Y_RNA.124-201ENST00000363339 93 ntBASIC0.33□□□□□ -2.36
HIST1H1AQ02539 RNU6-331P-201ENST00000384724 107 ntBASIC0.33□□□□□ -2.36
HIST1H1AQ02539 MIR301A-201ENST00000385261 86 ntBASIC0.33□□□□□ -2.36
HIST1H1AQ02539 RNA5SP390-201ENST00000410191 113 ntBASIC0.33□□□□□ -2.36
HIST1H1AQ02539 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC0.33□□□□□ -2.36
HIST1H1AQ02539 LARP1BP3-201ENST00000437229 869 ntBASIC0.33□□□□□ -2.36
HIST1H1AQ02539 AC114878.1-201ENST00000441166 358 ntBASIC0.33□□□□□ -2.36
HIST1H1AQ02539 MTND1P30-201ENST00000441241 901 ntBASIC0.33□□□□□ -2.36
HIST1H1AQ02539 TAF9P1-201ENST00000445421 515 ntBASIC0.33□□□□□ -2.36
HIST1H1AQ02539 AL358794.1-201ENST00000445689 381 ntBASIC0.33□□□□□ -2.36
HIST1H1AQ02539 TAF9P2-201ENST00000454958 515 ntBASIC0.33□□□□□ -2.36
HIST1H1AQ02539 AC005741.1-201ENST00000511094 432 ntBASIC0.33□□□□□ -2.36
HIST1H1AQ02539 AC104417.1-201ENST00000523974 751 ntBASIC0.33□□□□□ -2.36
HIST1H1AQ02539 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC0.33□□□□□ -2.36
HIST1H1AQ02539 SLC2A13P1-201ENST00000531560 322 ntBASIC0.33□□□□□ -2.36
HIST1H1AQ02539 AL590705.4-201ENST00000532209 134 ntBASIC0.33□□□□□ -2.36
HIST1H1AQ02539 AC018659.1-201ENST00000551083 169 ntBASIC0.33□□□□□ -2.36
HIST1H1AQ02539 MIR151B-201ENST00000584249 96 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms