Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 RPL21P111-201ENST00000418453 477 ntBASIC0.98□□□□□ -2.25
HOXC5Q00444 AL590556.1-201ENST00000423231 483 ntBASIC0.98□□□□□ -2.25
HOXC5Q00444 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC0.98□□□□□ -2.25
HOXC5Q00444 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.98□□□□□ -2.25
HOXC5Q00444 CBX3P6-201ENST00000430257 527 ntBASIC0.98□□□□□ -2.25
HOXC5Q00444 NDUFB1P2-201ENST00000449477 176 ntBASIC0.98□□□□□ -2.25
HOXC5Q00444 AC112492.4-201ENST00000456549 352 ntBASIC0.98□□□□□ -2.25
HOXC5Q00444 AC087477.1-201ENST00000465747 340 ntBASIC0.98□□□□□ -2.25
HOXC5Q00444 RPS26P55-201ENST00000471178 356 ntBASIC0.98□□□□□ -2.25
HOXC5Q00444 MTND2P33-201ENST00000506452 1031 ntBASIC0.98□□□□□ -2.25
HOXC5Q00444 RNA5SP445-201ENST00000515889 115 ntBASIC0.98□□□□□ -2.25
HOXC5Q00444 RNU2-10P-201ENST00000516375 211 ntBASIC0.98□□□□□ -2.25
HOXC5Q00444 RNA5SP490-201ENST00000517141 136 ntBASIC0.98□□□□□ -2.25
HOXC5Q00444 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.98□□□□□ -2.25
HOXC5Q00444 AP000654.2-201ENST00000605633 586 ntBASIC0.98□□□□□ -2.25
HOXC5Q00444 SNORD114-21-201ENST00000606412 72 ntBASIC0.98□□□□□ -2.25
HOXC5Q00444 U6.42-201ENST00000618440 107 ntBASIC0.98□□□□□ -2.25
HOXC5Q00444 AP000484.1-201ENST00000620067 1252 ntBASIC0.98□□□□□ -2.25
HOXC5Q00444 AC068205.3-201ENST00000636385 468 ntBASIC0.98□□□□□ -2.25
HOXC5Q00444 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
HOXC5Q00444 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC0.98□□□□□ -2.25
HOXC5Q00444 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
HOXC5Q00444 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC0.97□□□□□ -2.25
HOXC5Q00444 RNU6-112P-201ENST00000363599 104 ntBASIC0.97□□□□□ -2.25
HOXC5Q00444 RNU6-1242P-201ENST00000391052 103 ntBASIC0.97□□□□□ -2.25
HOXC5Q00444 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.97□□□□□ -2.25
HOXC5Q00444 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.97□□□□□ -2.25
HOXC5Q00444 RPS27P16-201ENST00000425758 201 ntBASIC0.97□□□□□ -2.25
HOXC5Q00444 AC092648.1-201ENST00000425870 423 ntBASIC0.97□□□□□ -2.25
HOXC5Q00444 TOMM22P2-201ENST00000430735 237 ntBASIC0.97□□□□□ -2.25
HOXC5Q00444 MTCO1P44-201ENST00000441935 243 ntBASIC0.97□□□□□ -2.25
HOXC5Q00444 RPL39P29-201ENST00000447779 157 ntBASIC0.97□□□□□ -2.25
HOXC5Q00444 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.97□□□□□ -2.25
HOXC5Q00444 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.97□□□□□ -2.25
HOXC5Q00444 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC0.97□□□□□ -2.25
HOXC5Q00444 RNU6-902P-201ENST00000517212 91 ntBASIC0.97□□□□□ -2.25
HOXC5Q00444 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.97□□□□□ -2.25
HOXC5Q00444 AC019176.1-201ENST00000518519 225 ntBASIC0.97□□□□□ -2.25
HOXC5Q00444 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.97□□□□□ -2.25
HOXC5Q00444 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.97□□□□□ -2.25
HOXC5Q00444 RPL21P5-201ENST00000554662 472 ntBASIC0.97□□□□□ -2.25
HOXC5Q00444 SNORA77B-201ENST00000578179 125 ntBASIC0.97□□□□□ -2.25
HOXC5Q00444 AC091135.1-201ENST00000585943 307 ntBASIC0.97□□□□□ -2.25
HOXC5Q00444 AC069431.2-201ENST00000604149 1099 ntBASIC0.97□□□□□ -2.25
HOXC5Q00444 AC123912.5-201ENST00000605470 343 ntBASIC0.97□□□□□ -2.25
HOXC5Q00444 AL359547.2-201ENST00000615810 418 ntBASIC0.97□□□□□ -2.25
HOXC5Q00444 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.97□□□□□ -2.25
HOXC5Q00444 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
HOXC5Q00444 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.97□□□□□ -2.25
HOXC5Q00444 RNU4-68P-201ENST00000364314 141 ntBASIC0.96□□□□□ -2.26
HOXC5Q00444 RNU6-482P-201ENST00000391068 107 ntBASIC0.96□□□□□ -2.26
HOXC5Q00444 AL357139.1-201ENST00000407792 426 ntBASIC0.96□□□□□ -2.26
HOXC5Q00444 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.96□□□□□ -2.26
HOXC5Q00444 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.96□□□□□ -2.26
HOXC5Q00444 BTF3L4P1-201ENST00000413813 468 ntBASIC0.96□□□□□ -2.26
HOXC5Q00444 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.96□□□□□ -2.26
HOXC5Q00444 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.96□□□□□ -2.26
HOXC5Q00444 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.96□□□□□ -2.26
HOXC5Q00444 AC006366.1-201ENST00000422002 759 ntBASIC0.96□□□□□ -2.26
HOXC5Q00444 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.96□□□□□ -2.26
HOXC5Q00444 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC0.96□□□□□ -2.26
HOXC5Q00444 HMGN2P18-201ENST00000450680 270 ntBASIC0.96□□□□□ -2.26
HOXC5Q00444 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.96□□□□□ -2.26
HOXC5Q00444 ZNF736P5Y-201ENST00000451173 805 ntBASIC0.96□□□□□ -2.26
HOXC5Q00444 ART2BP-201ENST00000453501 499 ntBASIC0.96□□□□□ -2.26
HOXC5Q00444 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.96□□□□□ -2.26
HOXC5Q00444 HMGN1P13-201ENST00000505795 138 ntBASIC0.96□□□□□ -2.26
HOXC5Q00444 MTCO3P9-201ENST00000506989 781 ntBASIC0.96□□□□□ -2.26
HOXC5Q00444 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC0.96□□□□□ -2.26
HOXC5Q00444 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.96□□□□□ -2.26
HOXC5Q00444 RNU6-123P-201ENST00000516163 102 ntBASIC0.96□□□□□ -2.26
HOXC5Q00444 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.96□□□□□ -2.26
HOXC5Q00444 AC104984.5-201ENST00000586878 94 ntBASIC0.96□□□□□ -2.26
HOXC5Q00444 AC005786.1-201ENST00000588553 154 ntBASIC0.96□□□□□ -2.26
HOXC5Q00444 AC080078.3-201ENST00000605407 463 ntBASIC0.96□□□□□ -2.26
HOXC5Q00444 AC144521.1-201ENST00000607148 956 ntBASIC0.96□□□□□ -2.26
HOXC5Q00444 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.96□□□□□ -2.26
HOXC5Q00444 MIR6078-201ENST00000611069 100 ntBASIC0.96□□□□□ -2.26
HOXC5Q00444 AC097372.5-201ENST00000623665 376 ntBASIC0.96□□□□□ -2.26
HOXC5Q00444 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.96□□□□□ -2.26
HOXC5Q00444 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC0.96□□□□□ -2.26
HOXC5Q00444 ICE2P2-201ENST00000483823 2787 ntBASIC0.96□□□□□ -2.26
HOXC5Q00444 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
HOXC5Q00444 SNORA22-201ENST00000383907 134 ntBASIC0.95□□□□□ -2.26
HOXC5Q00444 SNORA22C-201ENST00000384614 134 ntBASIC0.95□□□□□ -2.26
HOXC5Q00444 AL353777.1-201ENST00000425552 326 ntBASIC0.95□□□□□ -2.26
HOXC5Q00444 ZNF736P1Y-201ENST00000440402 1276 ntBASIC0.95□□□□□ -2.26
HOXC5Q00444 GDI2P2-201ENST00000445131 608 ntBASIC0.95□□□□□ -2.26
HOXC5Q00444 AC245517.4-201ENST00000448601 281 ntBASIC0.95□□□□□ -2.26
HOXC5Q00444 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.95□□□□□ -2.26
HOXC5Q00444 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC0.95□□□□□ -2.26
HOXC5Q00444 AC097473.1-201ENST00000508142 408 ntBASIC0.95□□□□□ -2.26
HOXC5Q00444 AC116347.2-201ENST00000514912 523 ntBASIC0.95□□□□□ -2.26
HOXC5Q00444 RNU7-51P-201ENST00000516560 62 ntBASIC0.95□□□□□ -2.26
HOXC5Q00444 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.95□□□□□ -2.26
HOXC5Q00444 AC022616.6-201ENST00000520479 119 ntBASIC0.95□□□□□ -2.26
HOXC5Q00444 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC0.95□□□□□ -2.26
HOXC5Q00444 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.95□□□□□ -2.26
HOXC5Q00444 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.95□□□□□ -2.26
HOXC5Q00444 AC090115.3-201ENST00000553218 849 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms