Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 AC026271.5-201ENST00000577873 130 ntBASIC2.1□□□□□ -2.07
SRP54P61011 AC091135.1-201ENST00000585943 307 ntBASIC2.1□□□□□ -2.07
SRP54P61011 AL031274.2-201ENST00000599419 203 ntBASIC2.1□□□□□ -2.07
SRP54P61011 AC078795.2-201ENST00000602835 1252 ntBASIC2.1□□□□□ -2.07
SRP54P61011 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.1□□□□□ -2.07
SRP54P61011 AC092881.1-201ENST00000638218 2733 ntBASIC2.1□□□□□ -2.07
SRP54P61011 RNU6-527P-201ENST00000363425 104 ntBASIC2.09□□□□□ -2.07
SRP54P61011 SNORA16B-201ENST00000364674 135 ntBASIC2.09□□□□□ -2.07
SRP54P61011 HMGN2P39-201ENST00000398005 273 ntBASIC2.09□□□□□ -2.07
SRP54P61011 MTATP6P18-201ENST00000417994 673 ntBASIC2.09□□□□□ -2.07
SRP54P61011 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.09□□□□□ -2.07
SRP54P61011 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.09□□□□□ -2.07
SRP54P61011 USP9YP8-201ENST00000441913 500 ntBASIC2.09□□□□□ -2.07
SRP54P61011 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.09□□□□□ -2.07
SRP54P61011 AC006512.1-201ENST00000468816 291 ntBASIC2.09□□□□□ -2.07
SRP54P61011 RPL30P1-201ENST00000488676 339 ntBASIC2.09□□□□□ -2.07
SRP54P61011 MTCO3P7-201ENST00000510008 774 ntBASIC2.09□□□□□ -2.07
SRP54P61011 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.09□□□□□ -2.07
SRP54P61011 AC109479.2-201ENST00000517842 174 ntBASIC2.09□□□□□ -2.07
SRP54P61011 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SRP54P61011 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.09□□□□□ -2.07
SRP54P61011 AC107953.1-201ENST00000522216 297 ntBASIC2.09□□□□□ -2.07
SRP54P61011 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.09□□□□□ -2.07
SRP54P61011 AP000763.2-201ENST00000540641 163 ntBASIC2.09□□□□□ -2.07
SRP54P61011 AC023050.3-201ENST00000541142 333 ntBASIC2.09□□□□□ -2.07
SRP54P61011 AC078814.3-201ENST00000553036 491 ntBASIC2.09□□□□□ -2.07
SRP54P61011 AC007229.1-201ENST00000590455 412 ntBASIC2.09□□□□□ -2.07
SRP54P61011 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.09□□□□□ -2.07
SRP54P61011 SNRPGP17-201ENST00000603780 214 ntBASIC2.09□□□□□ -2.07
SRP54P61011 AC025449.1-201ENST00000603896 529 ntBASIC2.09□□□□□ -2.07
SRP54P61011 AL359757.2-201ENST00000624309 274 ntBASIC2.09□□□□□ -2.07
SRP54P61011 AC005609.4-201ENST00000625071 447 ntBASIC2.09□□□□□ -2.07
SRP54P61011 ZNF680P1-201ENST00000436625 1469 ntBASIC2.08□□□□□ -2.08
SRP54P61011 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
SRP54P61011 RNU6-105P-201ENST00000363909 104 ntBASIC2.08□□□□□ -2.08
SRP54P61011 RNU6-1303P-201ENST00000364841 107 ntBASIC2.08□□□□□ -2.08
SRP54P61011 SNORA75-201ENST00000384158 137 ntBASIC2.08□□□□□ -2.08
SRP54P61011 RNU6-1127P-201ENST00000384580 107 ntBASIC2.08□□□□□ -2.08
SRP54P61011 SNORA40.19-201ENST00000390846 128 ntBASIC2.08□□□□□ -2.08
SRP54P61011 MIR1289-2-201ENST00000408360 111 ntBASIC2.08□□□□□ -2.08
SRP54P61011 RNU2-9P-201ENST00000410194 145 ntBASIC2.08□□□□□ -2.08
SRP54P61011 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.08□□□□□ -2.08
SRP54P61011 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.08□□□□□ -2.08
SRP54P61011 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.08□□□□□ -2.08
SRP54P61011 MTATP6P17-201ENST00000431030 672 ntBASIC2.08□□□□□ -2.08
SRP54P61011 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.08□□□□□ -2.08
SRP54P61011 HMGN2P3-201ENST00000433603 273 ntBASIC2.08□□□□□ -2.08
SRP54P61011 HMGN2P5-201ENST00000436882 273 ntBASIC2.08□□□□□ -2.08
SRP54P61011 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
SRP54P61011 MTND1P26-201ENST00000440488 538 ntBASIC2.08□□□□□ -2.08
SRP54P61011 RPL39P29-201ENST00000447779 157 ntBASIC2.08□□□□□ -2.08
SRP54P61011 RPL30P12-201ENST00000474666 353 ntBASIC2.08□□□□□ -2.08
SRP54P61011 AC079382.1-201ENST00000493346 557 ntBASIC2.08□□□□□ -2.08
SRP54P61011 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.08□□□□□ -2.08
SRP54P61011 RNU2-69P-201ENST00000516061 100 ntBASIC2.08□□□□□ -2.08
SRP54P61011 RNU6-667P-201ENST00000517186 102 ntBASIC2.08□□□□□ -2.08
SRP54P61011 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.08□□□□□ -2.08
SRP54P61011 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
SRP54P61011 AL356057.1-201ENST00000533798 831 ntBASIC2.08□□□□□ -2.08
SRP54P61011 AC018630.3-201ENST00000542637 96 ntBASIC2.08□□□□□ -2.08
SRP54P61011 MTCO3P23-201ENST00000561363 289 ntBASIC2.08□□□□□ -2.08
SRP54P61011 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.08□□□□□ -2.08
SRP54P61011 MIR3941-201ENST00000582572 103 ntBASIC2.08□□□□□ -2.08
SRP54P61011 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
SRP54P61011 ELL2P3-201ENST00000457883 1602 ntBASIC2.08□□□□□ -2.08
SRP54P61011 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
SRP54P61011 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
SRP54P61011 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
SRP54P61011 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
SRP54P61011 Y_RNA.77-201ENST00000362962 107 ntBASIC2.07□□□□□ -2.08
SRP54P61011 RNU6-546P-201ENST00000383991 107 ntBASIC2.07□□□□□ -2.08
SRP54P61011 RNU6-1222P-201ENST00000384615 107 ntBASIC2.07□□□□□ -2.08
SRP54P61011 SNORD70.1-201ENST00000391007 85 ntBASIC2.07□□□□□ -2.08
SRP54P61011 GSTA9P-201ENST00000406231 611 ntBASIC2.07□□□□□ -2.08
SRP54P61011 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.07□□□□□ -2.08
SRP54P61011 RNU6-1245P-201ENST00000411130 106 ntBASIC2.07□□□□□ -2.08
SRP54P61011 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.07□□□□□ -2.08
SRP54P61011 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.07□□□□□ -2.08
SRP54P61011 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC2.07□□□□□ -2.08
SRP54P61011 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SRP54P61011 AL445646.1-201ENST00000431784 216 ntBASIC2.07□□□□□ -2.08
SRP54P61011 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.07□□□□□ -2.08
SRP54P61011 PRPS1P1-201ENST00000445305 876 ntBASIC2.07□□□□□ -2.08
SRP54P61011 FTH1P25-201ENST00000447665 469 ntBASIC2.07□□□□□ -2.08
SRP54P61011 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.07□□□□□ -2.08
SRP54P61011 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.07□□□□□ -2.08
SRP54P61011 MTND2P33-201ENST00000506452 1031 ntBASIC2.07□□□□□ -2.08
SRP54P61011 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.07□□□□□ -2.08
SRP54P61011 AC010493.1-201ENST00000513479 292 ntBASIC2.07□□□□□ -2.08
SRP54P61011 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.07□□□□□ -2.08
SRP54P61011 AC115990.1-201ENST00000526957 301 ntBASIC2.07□□□□□ -2.08
SRP54P61011 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.07□□□□□ -2.08
SRP54P61011 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.07□□□□□ -2.08
SRP54P61011 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.07□□□□□ -2.08
SRP54P61011 AC008536.2-201ENST00000607284 349 ntBASIC2.07□□□□□ -2.08
SRP54P61011 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.07□□□□□ -2.08
SRP54P61011 AC022202.1-201ENST00000613515 211 ntBASIC2.07□□□□□ -2.08
SRP54P61011 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.07□□□□□ -2.08
SRP54P61011 uc_338.20-201ENST00000621563 178 ntBASIC2.07□□□□□ -2.08
SRP54P61011 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms