Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 AC004944.1-201ENST00000517807 3059 ntBASIC2.26□□□□□ -2.05
PEX3P56589 AC004520.1-201ENST00000608362 1413 ntBASIC2.26□□□□□ -2.05
PEX3P56589 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
PEX3P56589 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.26□□□□□ -2.05
PEX3P56589 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
PEX3P56589 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.26□□□□□ -2.05
PEX3P56589 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
PEX3P56589 RNY4P14-201ENST00000363656 96 ntBASIC2.26□□□□□ -2.05
PEX3P56589 RNY3P3-201ENST00000363816 102 ntBASIC2.26□□□□□ -2.05
PEX3P56589 RNU6-1090P-201ENST00000364065 94 ntBASIC2.26□□□□□ -2.05
PEX3P56589 RNU6-522P-201ENST00000364497 107 ntBASIC2.26□□□□□ -2.05
PEX3P56589 Y_RNA.324-201ENST00000365165 102 ntBASIC2.26□□□□□ -2.05
PEX3P56589 RNU6-1280P-201ENST00000365211 107 ntBASIC2.26□□□□□ -2.05
PEX3P56589 RNU6-1083P-201ENST00000384022 107 ntBASIC2.26□□□□□ -2.05
PEX3P56589 RNU6-19P-201ENST00000384718 107 ntBASIC2.26□□□□□ -2.05
PEX3P56589 AL590002.1-201ENST00000406554 418 ntBASIC2.26□□□□□ -2.05
PEX3P56589 RNU6-1068P-201ENST00000410958 103 ntBASIC2.26□□□□□ -2.05
PEX3P56589 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.26□□□□□ -2.05
PEX3P56589 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.26□□□□□ -2.05
PEX3P56589 PGBD4P6-201ENST00000421501 610 ntBASIC2.26□□□□□ -2.05
PEX3P56589 AC027124.2-201ENST00000428249 105 ntBASIC2.26□□□□□ -2.05
PEX3P56589 AL445646.1-201ENST00000431784 216 ntBASIC2.26□□□□□ -2.05
PEX3P56589 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC2.26□□□□□ -2.05
PEX3P56589 MTND1P4-201ENST00000435196 415 ntBASIC2.26□□□□□ -2.05
PEX3P56589 SEPT14P3-201ENST00000439401 183 ntBASIC2.26□□□□□ -2.05
PEX3P56589 AL732372.2-207ENST00000445840 183 ntBASIC2.26□□□□□ -2.05
PEX3P56589 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.26□□□□□ -2.05
PEX3P56589 SEPT14P2-201ENST00000453405 183 ntBASIC2.26□□□□□ -2.05
PEX3P56589 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.26□□□□□ -2.05
PEX3P56589 snoU109.2-201ENST00000459316 135 ntBASIC2.26□□□□□ -2.05
PEX3P56589 RPS29P25-201ENST00000481709 171 ntBASIC2.26□□□□□ -2.05
PEX3P56589 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.26□□□□□ -2.05
PEX3P56589 HMGB3P3-201ENST00000510526 400 ntBASIC2.26□□□□□ -2.05
PEX3P56589 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.26□□□□□ -2.05
PEX3P56589 AC011352.1-201ENST00000512300 793 ntBASIC2.26□□□□□ -2.05
PEX3P56589 SEPT14P4-201ENST00000513445 186 ntBASIC2.26□□□□□ -2.05
PEX3P56589 RNA5SP401-201ENST00000515920 127 ntBASIC2.26□□□□□ -2.05
PEX3P56589 RNU6-1281P-201ENST00000516223 105 ntBASIC2.26□□□□□ -2.05
PEX3P56589 MTND1P5-201ENST00000517906 940 ntBASIC2.26□□□□□ -2.05
PEX3P56589 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.26□□□□□ -2.05
PEX3P56589 FO082796.1-201ENST00000523795 183 ntBASIC2.26□□□□□ -2.05
PEX3P56589 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.26□□□□□ -2.05
PEX3P56589 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.26□□□□□ -2.05
PEX3P56589 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.26□□□□□ -2.05
PEX3P56589 AC010329.5-201ENST00000623497 2174 ntBASIC2.26□□□□□ -2.05
PEX3P56589 Y_RNA.6-201ENST00000362350 114 ntBASIC2.25□□□□□ -2.05
PEX3P56589 RNU6-82P-201ENST00000363970 107 ntBASIC2.25□□□□□ -2.05
PEX3P56589 RNU6-266P-201ENST00000364225 107 ntBASIC2.25□□□□□ -2.05
PEX3P56589 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
PEX3P56589 Y_RNA.450-201ENST00000384198 113 ntBASIC2.25□□□□□ -2.05
PEX3P56589 Y_RNA.480-201ENST00000384364 102 ntBASIC2.25□□□□□ -2.05
PEX3P56589 AL606923.1-201ENST00000406616 190 ntBASIC2.25□□□□□ -2.05
PEX3P56589 RAP1BP3-201ENST00000407180 549 ntBASIC2.25□□□□□ -2.05
PEX3P56589 RNU4-26P-201ENST00000410270 107 ntBASIC2.25□□□□□ -2.05
PEX3P56589 RNU2-2P-201ENST00000410396 191 ntBASIC2.25□□□□□ -2.05
PEX3P56589 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.25□□□□□ -2.05
PEX3P56589 USP9YP18-201ENST00000425912 695 ntBASIC2.25□□□□□ -2.05
PEX3P56589 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
PEX3P56589 USP9YP8-201ENST00000441913 500 ntBASIC2.25□□□□□ -2.05
PEX3P56589 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.25□□□□□ -2.05
PEX3P56589 AP001324.2-201ENST00000461163 319 ntBASIC2.25□□□□□ -2.05
PEX3P56589 MTCO3P38-201ENST00000468910 766 ntBASIC2.25□□□□□ -2.05
PEX3P56589 MED28P2-201ENST00000475771 317 ntBASIC2.25□□□□□ -2.05
PEX3P56589 AP001025.1-201ENST00000486139 332 ntBASIC2.25□□□□□ -2.05
PEX3P56589 MTAPP1-201ENST00000489154 819 ntBASIC2.25□□□□□ -2.05
PEX3P56589 RPL38P4-201ENST00000502376 214 ntBASIC2.25□□□□□ -2.05
PEX3P56589 MTCYBP40-201ENST00000509390 1135 ntBASIC2.25□□□□□ -2.05
PEX3P56589 SNORA43.2-201ENST00000516652 128 ntBASIC2.25□□□□□ -2.05
PEX3P56589 MTND4P7-201ENST00000523876 130 ntBASIC2.25□□□□□ -2.05
PEX3P56589 CENPUP1-201ENST00000526649 1202 ntBASIC2.25□□□□□ -2.05
PEX3P56589 AC109635.3-201ENST00000529536 185 ntBASIC2.25□□□□□ -2.05
PEX3P56589 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.25□□□□□ -2.05
PEX3P56589 CR383656.8-201ENST00000549046 145 ntBASIC2.25□□□□□ -2.05
PEX3P56589 AL670379.10-201ENST00000604330 253 ntBASIC2.25□□□□□ -2.05
PEX3P56589 AL670379.9-201ENST00000605428 253 ntBASIC2.25□□□□□ -2.05
PEX3P56589 AC123912.5-201ENST00000605470 343 ntBASIC2.25□□□□□ -2.05
PEX3P56589 AC002044.1-201ENST00000606707 158 ntBASIC2.25□□□□□ -2.05
PEX3P56589 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.25□□□□□ -2.05
PEX3P56589 U2.15-201ENST00000611544 191 ntBASIC2.25□□□□□ -2.05
PEX3P56589 AC084782.3-201ENST00000612282 578 ntBASIC2.25□□□□□ -2.05
PEX3P56589 U2.16-201ENST00000613119 191 ntBASIC2.25□□□□□ -2.05
PEX3P56589 U2.12-201ENST00000613778 191 ntBASIC2.25□□□□□ -2.05
PEX3P56589 U2.20-201ENST00000613956 192 ntBASIC2.25□□□□□ -2.05
PEX3P56589 U2.9-201ENST00000615427 191 ntBASIC2.25□□□□□ -2.05
PEX3P56589 U2.11-201ENST00000616345 191 ntBASIC2.25□□□□□ -2.05
PEX3P56589 U2.2-201ENST00000616535 191 ntBASIC2.25□□□□□ -2.05
PEX3P56589 U2.3-201ENST00000617785 191 ntBASIC2.25□□□□□ -2.05
PEX3P56589 U2.19-201ENST00000618602 191 ntBASIC2.25□□□□□ -2.05
PEX3P56589 RNU2-1-201ENST00000618664 191 ntBASIC2.25□□□□□ -2.05
PEX3P56589 U2.6-201ENST00000619225 191 ntBASIC2.25□□□□□ -2.05
PEX3P56589 U2.5-201ENST00000619465 191 ntBASIC2.25□□□□□ -2.05
PEX3P56589 U2.10-201ENST00000620268 191 ntBASIC2.25□□□□□ -2.05
PEX3P56589 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.25□□□□□ -2.05
PEX3P56589 MIR7515-201ENST00000637837 67 ntBASIC2.25□□□□□ -2.05
PEX3P56589 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.25□□□□□ -2.05
PEX3P56589 AC131280.1-202ENST00000624067 4211 ntBASIC2.25□□□□□ -2.05
PEX3P56589 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.25□□□□□ -2.05
PEX3P56589 AL109809.4-201ENST00000603520 2185 ntBASIC2.25□□□□□ -2.05
PEX3P56589 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
PEX3P56589 Y_RNA.38-201ENST00000362617 102 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 149.6 ms