Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC243972.3-201ENST00000539655 198 ntBASIC2.52□□□□□ -2.01
LIMK1P53667 CR383656.8-201ENST00000549046 145 ntBASIC2.52□□□□□ -2.01
LIMK1P53667 AC121758.2-201ENST00000553271 193 ntBASIC2.52□□□□□ -2.01
LIMK1P53667 AC105137.2-201ENST00000569073 466 ntBASIC2.52□□□□□ -2.01
LIMK1P53667 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.52□□□□□ -2.01
LIMK1P53667 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.52□□□□□ -2.01
LIMK1P53667 AC021646.1-201ENST00000605469 484 ntBASIC2.52□□□□□ -2.01
LIMK1P53667 RNU6-91P-201ENST00000607774 107 ntBASIC2.52□□□□□ -2.01
LIMK1P53667 AC093788.1-201ENST00000609356 927 ntBASIC2.52□□□□□ -2.01
LIMK1P53667 AL359880.1-201ENST00000621879 266 ntBASIC2.52□□□□□ -2.01
LIMK1P53667 AC012640.5-201ENST00000623897 319 ntBASIC2.52□□□□□ -2.01
LIMK1P53667 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.52□□□□□ -2.01
LIMK1P53667 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
LIMK1P53667 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
LIMK1P53667 MIR6073-201ENST00000352083 89 ntBASIC2.51□□□□□ -2.01
LIMK1P53667 SNORD56.1-201ENST00000362913 68 ntBASIC2.51□□□□□ -2.01
LIMK1P53667 SNORA3A-201ENST00000364113 130 ntBASIC2.51□□□□□ -2.01
LIMK1P53667 RNA5SP125-201ENST00000364843 120 ntBASIC2.51□□□□□ -2.01
LIMK1P53667 BTF3P7-201ENST00000407097 488 ntBASIC2.51□□□□□ -2.01
LIMK1P53667 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.51□□□□□ -2.01
LIMK1P53667 RN7SKP158-201ENST00000410453 326 ntBASIC2.51□□□□□ -2.01
LIMK1P53667 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.51□□□□□ -2.01
LIMK1P53667 AL591043.1-201ENST00000432461 424 ntBASIC2.51□□□□□ -2.01
LIMK1P53667 AC083798.1-201ENST00000472671 131 ntBASIC2.51□□□□□ -2.01
LIMK1P53667 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.51□□□□□ -2.01
LIMK1P53667 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.51□□□□□ -2.01
LIMK1P53667 IGLV3-17-201ENST00000519099 244 ntBASIC2.51□□□□□ -2.01
LIMK1P53667 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.51□□□□□ -2.01
LIMK1P53667 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.51□□□□□ -2.01
LIMK1P53667 MIR5583-1-201ENST00000580941 59 ntBASIC2.51□□□□□ -2.01
LIMK1P53667 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.51□□□□□ -2.01
LIMK1P53667 AL161423.1-201ENST00000613700 262 ntBASIC2.51□□□□□ -2.01
LIMK1P53667 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
LIMK1P53667 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.5□□□□□ -2.01
LIMK1P53667 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
LIMK1P53667 Y_RNA.4-201ENST00000362333 112 ntBASIC2.5□□□□□ -2.01
LIMK1P53667 Y_RNA.41-201ENST00000362646 102 ntBASIC2.5□□□□□ -2.01
LIMK1P53667 RNU4-66P-201ENST00000365199 138 ntBASIC2.5□□□□□ -2.01
LIMK1P53667 Y_RNA.372-201ENST00000365599 102 ntBASIC2.5□□□□□ -2.01
LIMK1P53667 RNU6-843P-201ENST00000384454 104 ntBASIC2.5□□□□□ -2.01
LIMK1P53667 AL590002.1-201ENST00000406554 418 ntBASIC2.5□□□□□ -2.01
LIMK1P53667 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.5□□□□□ -2.01
LIMK1P53667 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.5□□□□□ -2.01
LIMK1P53667 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.5□□□□□ -2.01
LIMK1P53667 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.5□□□□□ -2.01
LIMK1P53667 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.5□□□□□ -2.01
LIMK1P53667 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.5□□□□□ -2.01
LIMK1P53667 CR769767.1-201ENST00000436337 346 ntBASIC2.5□□□□□ -2.01
LIMK1P53667 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
LIMK1P53667 DNAJC19P4-201ENST00000440115 345 ntBASIC2.5□□□□□ -2.01
LIMK1P53667 IPO7P1-201ENST00000442031 636 ntBASIC2.5□□□□□ -2.01
LIMK1P53667 RNU7-180P-201ENST00000459240 63 ntBASIC2.5□□□□□ -2.01
LIMK1P53667 AC140059.1-201ENST00000489238 361 ntBASIC2.5□□□□□ -2.01
LIMK1P53667 RNU6-377P-201ENST00000515965 102 ntBASIC2.5□□□□□ -2.01
LIMK1P53667 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.5□□□□□ -2.01
LIMK1P53667 AL138976.2-201ENST00000563989 694 ntBASIC2.5□□□□□ -2.01
LIMK1P53667 AC025165.5-201ENST00000602802 578 ntBASIC2.5□□□□□ -2.01
LIMK1P53667 AC002044.1-201ENST00000606707 158 ntBASIC2.5□□□□□ -2.01
LIMK1P53667 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
LIMK1P53667 AP003400.5-201ENST00000624827 617 ntBASIC2.5□□□□□ -2.01
LIMK1P53667 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
LIMK1P53667 MIR144-201ENST00000384886 86 ntBASIC2.49□□□□□ -2.01
LIMK1P53667 SNORD23.1-201ENST00000408212 104 ntBASIC2.49□□□□□ -2.01
LIMK1P53667 OR9R1P-201ENST00000412200 877 ntBASIC2.49□□□□□ -2.01
LIMK1P53667 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.49□□□□□ -2.01
LIMK1P53667 AC074117.2-201ENST00000417130 397 ntBASIC2.49□□□□□ -2.01
LIMK1P53667 AC096638.1-201ENST00000444678 216 ntBASIC2.49□□□□□ -2.01
LIMK1P53667 RNU7-167P-201ENST00000459160 62 ntBASIC2.49□□□□□ -2.01
LIMK1P53667 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.49□□□□□ -2.01
LIMK1P53667 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.49□□□□□ -2.01
LIMK1P53667 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.49□□□□□ -2.01
LIMK1P53667 Y_RNA.693-201ENST00000516641 110 ntBASIC2.49□□□□□ -2.01
LIMK1P53667 Y_RNA.704-201ENST00000516851 102 ntBASIC2.49□□□□□ -2.01
LIMK1P53667 AC069113.1-201ENST00000517763 267 ntBASIC2.49□□□□□ -2.01
LIMK1P53667 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.49□□□□□ -2.01
LIMK1P53667 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.49□□□□□ -2.01
LIMK1P53667 AC022880.1-201ENST00000534017 973 ntBASIC2.49□□□□□ -2.01
LIMK1P53667 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.49□□□□□ -2.01
LIMK1P53667 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.49□□□□□ -2.01
LIMK1P53667 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.49□□□□□ -2.01
LIMK1P53667 MIR5694-201ENST00000581190 76 ntBASIC2.49□□□□□ -2.01
LIMK1P53667 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC2.49□□□□□ -2.01
LIMK1P53667 MIR3941-201ENST00000582572 103 ntBASIC2.49□□□□□ -2.01
LIMK1P53667 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.49□□□□□ -2.01
LIMK1P53667 U4atac.1-201ENST00000618345 95 ntBASIC2.49□□□□□ -2.01
LIMK1P53667 MIR7111-201ENST00000619751 72 ntBASIC2.49□□□□□ -2.01
LIMK1P53667 RMST_7.1-201ENST00000621935 268 ntBASIC2.49□□□□□ -2.01
LIMK1P53667 AC139792.2-201ENST00000624218 587 ntBASIC2.49□□□□□ -2.01
LIMK1P53667 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.49□□□□□ -2.01
LIMK1P53667 RNU6-78P-201ENST00000362897 107 ntBASIC2.48□□□□□ -2.01
LIMK1P53667 SNORD116-4-201ENST00000384733 96 ntBASIC2.48□□□□□ -2.01
LIMK1P53667 RNA5SP219-201ENST00000390940 113 ntBASIC2.48□□□□□ -2.01
LIMK1P53667 AL079342.1-201ENST00000401460 267 ntBASIC2.48□□□□□ -2.01
LIMK1P53667 RNU6-1245P-201ENST00000411130 106 ntBASIC2.48□□□□□ -2.01
LIMK1P53667 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
LIMK1P53667 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.48□□□□□ -2.01
LIMK1P53667 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.48□□□□□ -2.01
LIMK1P53667 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.48□□□□□ -2.01
LIMK1P53667 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.48□□□□□ -2.01
LIMK1P53667 HMGN2P23-201ENST00000456759 269 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms