Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
MSH6P52701 KLF3P2-201ENST00000465138 268 ntBASIC1.88□□□□□ -2.11
MSH6P52701 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.88□□□□□ -2.11
MSH6P52701 RNU6-759P-201ENST00000516740 103 ntBASIC1.88□□□□□ -2.11
MSH6P52701 AC022616.3-201ENST00000523940 148 ntBASIC1.88□□□□□ -2.11
MSH6P52701 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC1.88□□□□□ -2.11
MSH6P52701 ADI1P3-201ENST00000549509 470 ntBASIC1.88□□□□□ -2.11
MSH6P52701 AL139286.2-201ENST00000606838 396 ntBASIC1.88□□□□□ -2.11
MSH6P52701 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.88□□□□□ -2.11
MSH6P52701 AL161423.1-201ENST00000613700 262 ntBASIC1.88□□□□□ -2.11
MSH6P52701 AC091932.3-201ENST00000624223 323 ntBASIC1.88□□□□□ -2.11
MSH6P52701 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
MSH6P52701 MIR412-201ENST00000362142 91 ntBASIC1.87□□□□□ -2.11
MSH6P52701 Y_RNA.22-201ENST00000362492 102 ntBASIC1.87□□□□□ -2.11
MSH6P52701 SNORA16B-201ENST00000364674 135 ntBASIC1.87□□□□□ -2.11
MSH6P52701 SNORA24.1-201ENST00000384401 135 ntBASIC1.87□□□□□ -2.11
MSH6P52701 SNORA40.6-201ENST00000391153 128 ntBASIC1.87□□□□□ -2.11
MSH6P52701 RPS3AP36-201ENST00000398190 775 ntBASIC1.87□□□□□ -2.11
MSH6P52701 Y_RNA.623-201ENST00000411128 95 ntBASIC1.87□□□□□ -2.11
MSH6P52701 AC016831.2-201ENST00000417179 352 ntBASIC1.87□□□□□ -2.11
MSH6P52701 AC009518.2-201ENST00000418056 731 ntBASIC1.87□□□□□ -2.11
MSH6P52701 AL160275.3-201ENST00000423876 471 ntBASIC1.87□□□□□ -2.11
MSH6P52701 MTND5P25-201ENST00000430499 799 ntBASIC1.87□□□□□ -2.11
MSH6P52701 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.87□□□□□ -2.11
MSH6P52701 RPS24P1-201ENST00000438550 371 ntBASIC1.87□□□□□ -2.11
MSH6P52701 AC016691.1-201ENST00000441321 413 ntBASIC1.87□□□□□ -2.11
MSH6P52701 MTND6P13-201ENST00000443510 523 ntBASIC1.87□□□□□ -2.11
MSH6P52701 AL133217.1-201ENST00000450980 425 ntBASIC1.87□□□□□ -2.11
MSH6P52701 AL583843.1-201ENST00000456070 346 ntBASIC1.87□□□□□ -2.11
MSH6P52701 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.87□□□□□ -2.11
MSH6P52701 RAP1BP2-201ENST00000478270 544 ntBASIC1.87□□□□□ -2.11
MSH6P52701 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.87□□□□□ -2.11
MSH6P52701 AC117522.1-201ENST00000509821 380 ntBASIC1.87□□□□□ -2.11
MSH6P52701 SMURF2P1-201ENST00000514992 481 ntBASIC1.87□□□□□ -2.11
MSH6P52701 SNORA25.11-201ENST00000515935 105 ntBASIC1.87□□□□□ -2.11
MSH6P52701 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.87□□□□□ -2.11
MSH6P52701 CBX3P7-201ENST00000532876 502 ntBASIC1.87□□□□□ -2.11
MSH6P52701 AC025678.1-201ENST00000567861 338 ntBASIC1.87□□□□□ -2.11
MSH6P52701 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.87□□□□□ -2.11
MSH6P52701 MTATP6P3-201ENST00000581686 676 ntBASIC1.87□□□□□ -2.11
MSH6P52701 AC005771.1-201ENST00000585581 349 ntBASIC1.87□□□□□ -2.11
MSH6P52701 AL158032.1-201ENST00000605401 106 ntBASIC1.87□□□□□ -2.11
MSH6P52701 AC012409.4-201ENST00000612923 249 ntBASIC1.87□□□□□ -2.11
MSH6P52701 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.87□□□□□ -2.11
MSH6P52701 AC008993.2-201ENST00000631744 806 ntBASIC1.87□□□□□ -2.11
MSH6P52701 AP000648.3-201ENST00000623539 4507 ntBASIC1.87□□□□□ -2.11
MSH6P52701 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
MSH6P52701 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
MSH6P52701 AC138393.1-203ENST00000327086 343 ntBASIC1.86□□□□□ -2.11
MSH6P52701 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
MSH6P52701 RNU1-72P-201ENST00000362976 153 ntBASIC1.86□□□□□ -2.11
MSH6P52701 RNU6-942P-201ENST00000363002 107 ntBASIC1.86□□□□□ -2.11
MSH6P52701 U8.3-201ENST00000363321 132 ntBASIC1.86□□□□□ -2.11
MSH6P52701 RNU6-169P-201ENST00000365336 107 ntBASIC1.86□□□□□ -2.11
MSH6P52701 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
MSH6P52701 AL133475.1-201ENST00000404414 305 ntBASIC1.86□□□□□ -2.11
MSH6P52701 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.86□□□□□ -2.11
MSH6P52701 AL627311.1-201ENST00000431514 115 ntBASIC1.86□□□□□ -2.11
MSH6P52701 AL353706.1-201ENST00000436728 494 ntBASIC1.86□□□□□ -2.11
MSH6P52701 AC112771.1-201ENST00000463581 102 ntBASIC1.86□□□□□ -2.11
MSH6P52701 AC117503.1-201ENST00000472241 394 ntBASIC1.86□□□□□ -2.11
MSH6P52701 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.86□□□□□ -2.11
MSH6P52701 HMGB3P17-201ENST00000504195 649 ntBASIC1.86□□□□□ -2.11
MSH6P52701 AC112206.3-201ENST00000514578 389 ntBASIC1.86□□□□□ -2.11
MSH6P52701 RNU7-193P-201ENST00000516723 65 ntBASIC1.86□□□□□ -2.11
MSH6P52701 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.86□□□□□ -2.11
MSH6P52701 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.86□□□□□ -2.11
MSH6P52701 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.86□□□□□ -2.11
MSH6P52701 MIR548AB-201ENST00000584917 84 ntBASIC1.86□□□□□ -2.11
MSH6P52701 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.86□□□□□ -2.11
MSH6P52701 AC008749.1-201ENST00000597650 306 ntBASIC1.86□□□□□ -2.11
MSH6P52701 AL391646.1-201ENST00000603860 190 ntBASIC1.86□□□□□ -2.11
MSH6P52701 AC016727.2-201ENST00000603988 621 ntBASIC1.86□□□□□ -2.11
MSH6P52701 AL138963.2-201ENST00000605137 226 ntBASIC1.86□□□□□ -2.11
MSH6P52701 AC009159.2-201ENST00000617603 606 ntBASIC1.86□□□□□ -2.11
MSH6P52701 AC092656.1-203ENST00000624134 423 ntBASIC1.86□□□□□ -2.11
MSH6P52701 AL603839.4-201ENST00000624658 1005 ntBASIC1.86□□□□□ -2.11
MSH6P52701 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
MSH6P52701 RNU6-371P-201ENST00000364283 108 ntBASIC1.85□□□□□ -2.11
MSH6P52701 RNU6-61P-201ENST00000365528 109 ntBASIC1.85□□□□□ -2.11
MSH6P52701 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.85□□□□□ -2.11
MSH6P52701 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.85□□□□□ -2.11
MSH6P52701 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.85□□□□□ -2.11
MSH6P52701 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC1.85□□□□□ -2.11
MSH6P52701 RNU6-123P-201ENST00000516163 102 ntBASIC1.85□□□□□ -2.11
MSH6P52701 CR383656.8-201ENST00000549046 145 ntBASIC1.85□□□□□ -2.11
MSH6P52701 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.85□□□□□ -2.11
MSH6P52701 MIR3915-201ENST00000578518 97 ntBASIC1.85□□□□□ -2.11
MSH6P52701 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.85□□□□□ -2.11
MSH6P52701 AC008521.1-201ENST00000587471 187 ntBASIC1.85□□□□□ -2.11
MSH6P52701 AL138889.2-201ENST00000603883 242 ntBASIC1.85□□□□□ -2.11
MSH6P52701 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.85□□□□□ -2.11
MSH6P52701 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.85□□□□□ -2.11
MSH6P52701 U6.42-201ENST00000618440 107 ntBASIC1.85□□□□□ -2.11
MSH6P52701 MIR5739-201ENST00000619803 80 ntBASIC1.85□□□□□ -2.11
MSH6P52701 SDR42E1P4-201ENST00000620894 481 ntBASIC1.85□□□□□ -2.11
MSH6P52701 AF246928.1-201ENST00000623768 87 ntBASIC1.85□□□□□ -2.11
MSH6P52701 SNORD3E-201ENST00000362899 217 ntBASIC1.85□□□□□ -2.11
MSH6P52701 RNY1P12-201ENST00000364251 105 ntBASIC1.85□□□□□ -2.11
MSH6P52701 SNORA20.2-201ENST00000383922 131 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms