Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CDX1P47902 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.23□□□□□ -2.05
CDX1P47902 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CDX1P47902 RNU1-91P-201ENST00000364746 163 ntBASIC2.23□□□□□ -2.05
CDX1P47902 RNU4-12P-201ENST00000365233 139 ntBASIC2.23□□□□□ -2.05
CDX1P47902 Y_RNA.373-201ENST00000365600 103 ntBASIC2.23□□□□□ -2.05
CDX1P47902 RNU6-692P-201ENST00000384496 107 ntBASIC2.23□□□□□ -2.05
CDX1P47902 SNORD73A-201ENST00000386062 65 ntBASIC2.23□□□□□ -2.05
CDX1P47902 CBX3P9-201ENST00000402326 552 ntBASIC2.23□□□□□ -2.05
CDX1P47902 AC007064.1-201ENST00000412238 351 ntBASIC2.23□□□□□ -2.05
CDX1P47902 AIMP1P2-201ENST00000425294 312 ntBASIC2.23□□□□□ -2.05
CDX1P47902 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.23□□□□□ -2.05
CDX1P47902 AL135938.1-201ENST00000443141 297 ntBASIC2.23□□□□□ -2.05
CDX1P47902 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.23□□□□□ -2.05
CDX1P47902 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.23□□□□□ -2.05
CDX1P47902 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.23□□□□□ -2.05
CDX1P47902 RNA5SP82-201ENST00000516707 92 ntBASIC2.23□□□□□ -2.05
CDX1P47902 AC078814.3-201ENST00000553036 491 ntBASIC2.23□□□□□ -2.05
CDX1P47902 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.23□□□□□ -2.05
CDX1P47902 VN1R107P-201ENST00000601784 209 ntBASIC2.23□□□□□ -2.05
CDX1P47902 U4atac.1-201ENST00000618345 95 ntBASIC2.23□□□□□ -2.05
CDX1P47902 AL159153.1-201ENST00000619688 317 ntBASIC2.23□□□□□ -2.05
CDX1P47902 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.23□□□□□ -2.05
CDX1P47902 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.23□□□□□ -2.05
CDX1P47902 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.23□□□□□ -2.05
CDX1P47902 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.22□□□□□ -2.05
CDX1P47902 snoU2_19.1-201ENST00000362361 80 ntBASIC2.22□□□□□ -2.05
CDX1P47902 MIR144-201ENST00000384886 86 ntBASIC2.22□□□□□ -2.05
CDX1P47902 MIR514A2-201ENST00000385131 88 ntBASIC2.22□□□□□ -2.05
CDX1P47902 MIR514A3-201ENST00000385132 88 ntBASIC2.22□□□□□ -2.05
CDX1P47902 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
CDX1P47902 EIF4E2P1-201ENST00000393781 255 ntBASIC2.22□□□□□ -2.05
CDX1P47902 RPS29P13-201ENST00000402041 169 ntBASIC2.22□□□□□ -2.05
CDX1P47902 RNU4-26P-201ENST00000410270 107 ntBASIC2.22□□□□□ -2.05
CDX1P47902 RPS15AP10-201ENST00000432472 382 ntBASIC2.22□□□□□ -2.05
CDX1P47902 AC009238.1-201ENST00000442165 424 ntBASIC2.22□□□□□ -2.05
CDX1P47902 AC025750.2-201ENST00000442609 450 ntBASIC2.22□□□□□ -2.05
CDX1P47902 AC009237.6-201ENST00000446969 424 ntBASIC2.22□□□□□ -2.05
CDX1P47902 AL139109.1-201ENST00000455491 297 ntBASIC2.22□□□□□ -2.05
CDX1P47902 AC083904.1-201ENST00000487828 231 ntBASIC2.22□□□□□ -2.05
CDX1P47902 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.22□□□□□ -2.05
CDX1P47902 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.22□□□□□ -2.05
CDX1P47902 RNU6-1069P-201ENST00000516612 133 ntBASIC2.22□□□□□ -2.05
CDX1P47902 AC115990.1-201ENST00000526957 301 ntBASIC2.22□□□□□ -2.05
CDX1P47902 AP000763.2-201ENST00000540641 163 ntBASIC2.22□□□□□ -2.05
CDX1P47902 AC025423.5-201ENST00000550230 219 ntBASIC2.22□□□□□ -2.05
CDX1P47902 IMMP1LP2-201ENST00000552954 492 ntBASIC2.22□□□□□ -2.05
CDX1P47902 TPRKBP2-201ENST00000565969 475 ntBASIC2.22□□□□□ -2.05
CDX1P47902 MYL12BP1-201ENST00000569826 507 ntBASIC2.22□□□□□ -2.05
CDX1P47902 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.22□□□□□ -2.05
CDX1P47902 AL137847.3-201ENST00000611521 109 ntBASIC2.22□□□□□ -2.05
CDX1P47902 U4.5-201ENST00000617137 123 ntBASIC2.22□□□□□ -2.05
CDX1P47902 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CDX1P47902 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.22□□□□□ -2.05
CDX1P47902 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CDX1P47902 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.05
CDX1P47902 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.21□□□□□ -2.06
CDX1P47902 AC131280.1-202ENST00000624067 4211 ntBASIC2.21□□□□□ -2.06
CDX1P47902 SNORA5B-201ENST00000363786 132 ntBASIC2.21□□□□□ -2.06
CDX1P47902 RNY3P3-201ENST00000363816 102 ntBASIC2.21□□□□□ -2.06
CDX1P47902 RNU1-52P-201ENST00000384190 164 ntBASIC2.21□□□□□ -2.06
CDX1P47902 Y_RNA.573-201ENST00000384763 105 ntBASIC2.21□□□□□ -2.06
CDX1P47902 MIR95-201ENST00000385072 81 ntBASIC2.21□□□□□ -2.06
CDX1P47902 AL445529.1-201ENST00000398713 389 ntBASIC2.21□□□□□ -2.06
CDX1P47902 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.21□□□□□ -2.06
CDX1P47902 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.21□□□□□ -2.06
CDX1P47902 AC087499.2-201ENST00000432861 149 ntBASIC2.21□□□□□ -2.06
CDX1P47902 AC105272.1-201ENST00000438604 198 ntBASIC2.21□□□□□ -2.06
CDX1P47902 RNU6-1037P-201ENST00000459571 107 ntBASIC2.21□□□□□ -2.06
CDX1P47902 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.21□□□□□ -2.06
CDX1P47902 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.21□□□□□ -2.06
CDX1P47902 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.21□□□□□ -2.06
CDX1P47902 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.21□□□□□ -2.06
CDX1P47902 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.21□□□□□ -2.06
CDX1P47902 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.21□□□□□ -2.06
CDX1P47902 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.21□□□□□ -2.06
CDX1P47902 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.21□□□□□ -2.06
CDX1P47902 MIR5692C1-201ENST00000585309 91 ntBASIC2.21□□□□□ -2.06
CDX1P47902 AC068790.6-201ENST00000602558 258 ntBASIC2.21□□□□□ -2.06
CDX1P47902 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
CDX1P47902 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CDX1P47902 RNY4P14-201ENST00000363656 96 ntBASIC2.2□□□□□ -2.06
CDX1P47902 RNU6-214P-201ENST00000384130 107 ntBASIC2.2□□□□□ -2.06
CDX1P47902 Y_RNA.510-201ENST00000384511 114 ntBASIC2.2□□□□□ -2.06
CDX1P47902 AF274854.1-201ENST00000413236 615 ntBASIC2.2□□□□□ -2.06
CDX1P47902 MTCO1P21-201ENST00000416634 589 ntBASIC2.2□□□□□ -2.06
CDX1P47902 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.2□□□□□ -2.06
CDX1P47902 AL590556.1-201ENST00000423231 483 ntBASIC2.2□□□□□ -2.06
CDX1P47902 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC2.2□□□□□ -2.06
CDX1P47902 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.2□□□□□ -2.06
CDX1P47902 C8orf59P1-201ENST00000429930 303 ntBASIC2.2□□□□□ -2.06
CDX1P47902 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.2□□□□□ -2.06
CDX1P47902 MTCO2P3-201ENST00000442543 421 ntBASIC2.2□□□□□ -2.06
CDX1P47902 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.2□□□□□ -2.06
CDX1P47902 AL353752.1-201ENST00000454946 260 ntBASIC2.2□□□□□ -2.06
CDX1P47902 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.2□□□□□ -2.06
CDX1P47902 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.2□□□□□ -2.06
CDX1P47902 AC107222.1-201ENST00000510899 637 ntBASIC2.2□□□□□ -2.06
CDX1P47902 SNORA48.11-201ENST00000517015 89 ntBASIC2.2□□□□□ -2.06
CDX1P47902 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms